Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAAACAAGAGACAATTCTTACAATCCAGTCTTTTCACCAATGCTCAAGTCTCATATCAATCAAATTGAGTGTGTCAAACTACCTACTTTGGAAGTCGCAAGTTCTACCACTAGTGAGGAGTCTGGGAATTGAAGACCACCTCAAGGAAAGCAAGAAACCAGAAGAGCTCTTGACTGACAAAGATGGAGAAACTATTCCAAATCCTCAATACAACATTTGGCTCAACAATGATGGCCTTCTAACCTCTTGGCTTCTAGGCATCATAACTGAGGATGTGTTGGCCACAATTGAAGGAACAGATTCAGCATATCAAATGTGGAAATCTCTAGAAGAACAACTCCTCGCCGTTACAAAAGAAAACGAAATTCACCTCAATGAAGCCATCCTGAGTCTAAAAAAGGGAAGTCTCTCTTTAGATGAGTATTTGAAGAAAACTAAATTGTTTTGTGATCAACTTGCAGCTATGAAGAAACCAGTGGATGATCTCACAAAGGTGTTTCATGTTGCTAGAGGACTAGGAGCTAAATACCATGGATTTAAAACAGCCATGTTGTCCAAAGCACCATATCCAACCTATAATGAGTTCATCCTAGCTCTTAAAGCACATGAGGTAATGATAAATGCTGATAACGACGAGGAAAAGATGTCACAACTTGACCACAATCAAGCATTTTTTGCCCAAAAAGGAAGAGGCAGAGGCAGAGGAAGAAATTTCTCTTTTAGAGGAAGAGGTTTCCCTCAAGGCAGACAAATCGCTCCTGAAAATGCAGGTTACACAAGTCCTCATAAAACGAGCTCTTTCCAAGGGAGACACAAAGATTCAGGTTTGTCCAATTCCCCCTTTCACAAAAATGAGAGACTGACATGTCAAATCTATGGTAAAGGAAACCATACTGCATTGGAATGCTGGAATAGATTTGATCACTCATTCCAATCAGAAGATGTTCCCAAAGCCTTGGCTACACTGAACCTAAATGAAGGAGCAGACCCTCTCTTGTATGCTGATTCAGGTGCTACCTCACATATCTTGAATGATCCAAGTAAGATCCTTACCTATCAACCTTATAAAGGAAAAGAAAAAATATTTGTAGGGAATGGAAATCAACTTAACATATCACATATTGGACAAGGAAAAATAATCACTAATTACAAAGATCTTAAGTTGGAAAATGTTTTAATTGTGCCAGAAATTAAAAAATCTAATCTCTATTAGTAAACTCACACAAGATAATGATTGCACCATCACTTTTCTTGCTGATAAATTTGTTATAAAGAACAAACAGGGGCGGATTCTTGCTGAAGGAGCAAAGAAAGGAGGGTTGTATGCACTTGATGAGCAGAAACAAAGACAAGAAGCCATGGTTGCAATATCTTCTCAAAATAAGGTTGATTCATCCATATGGCATAGAAGAACGGGACATGTGAATCACAACTCTCTCAAACTTTTAAGAGAACAAAGTCTGATAAACGTGTCCTGTTGGACAAAGCAAGAAAAAATATGTGAAAGCTGTCAAATGGGAAAAAGTTGCAGATTACCCTTTGAATCTAATCATGTTTTAAGTTTATTTCCATTAGAAAAAATACATTGTGATTTGTGGGGCCCAACTCCTATTATTTCCTGCCAAAACTTCAAATATTATGCATGTTTTGTTGATGAGTATTCAAGATTCACTTGGCTATACCCTCTTAAAAGAAAATCAGATCTTTTTCTCTTGTTTTAAAAGGTTCAAAATGCTAGTTGAAAATCAATTTGACAGGAAAATCAAAGTATTTCAAAGTGATGGAGGTGGTGAGTTCACCTCTTTTGAGCTCAAGAAACTCTTGGAAGGAAGTGGGATACACCATCAATTCTCTTGTCCATTTACACCTCAACAAAATGGGGTGGTGGAGAGGAAACATCGTCCTATTGTAGAAACAGGTTTGACTCTTATGTTTCAATCTAATATGCCTTTAAAATATTGGGTGGATGCATTCCTCACTGCCGTGTATCTCATTAATAGAATGTCATCCAAGGCTCTTAATGAGCAAATTCCATTTCAAAAATTGTTTCAAAAGGCTCCTAATTATAGTGGCATCAAGGTATTTGGATGTAAATGCTTCCCTTATCTTAGAAACTATGGTAAACATAAGTTTTCAAAAAGAACATATCCATGTGTTTTCATCGGATATAGTCCTATACACAAAGGATATAGGTGTCTAGATCCGAGAAGTAATAGGGTATACATATCTCGTCATGTGATCTTTGATGAAGAATGTTATCCTTTAACTAACAATGCACAACACACAAACAATACACACCTTGTAGCTACTGAATTCTCAGGTTTTGAAGAATGGGAGAACACATCAGAAGAATCAAACAAGGCAAAATCACAGCCAACAACTCTTGGAGAGCCAATCAAAACCTCACACTGTTGTGACATAGAGAATAACAGTAGTTCACAAGAAGGGTCAATTGAGGAAGAAGATCATTTTCAAGAAAATAACAGGCCGCAGGAGATTATAATTGAGGAAGAAAATATTTCACCTACTACCAACACAGGAGATGATACTCAAGGAATAGAAGAGTCTACCTCAAACAACAGAACACCCATCTTCAACAAACACAATGAGCATTCTCATCTCCTTAACCTTCCTAACTCTAGTATATCAAATTCTAACAATCTTCCATATATTAGCAAACAGTTATATGTGGATCTTAACTTACATTCTGCCGGTGAACAAAATTCTGCAGGTGAACAAAATGATAGTAGTACAAGAACATCACATCCAGAAGGCTTATGCCAAATTCCATCGGGTCATCACATGGTTACAAGAAGGAAATTAG
mRNA sequence
ATGGCTAAACAAGAGACAATTCTTACAATCCAGTCTTTTCACCAATGCTCAAGTCTCATATCAATCAAATTGAGTGTGTCAAACTACCTACTTTGGAAGTCGCAAGTTCTACCACTAGTGAGGAGTCTGGGAATTGAAGACCACCTCAAGGAAAGCAAGAAACCAGAAGAGCTCTTGACTGACAAAGATGGAGAAACTATTCCAAATCCTCAATACAACATTTGGCTCAACAATGATGGCCTTCTAACCTCTTGGCTTCTAGGCATCATAACTGAGGATGTGTTGGCCACAATTGAAGGAACAGATTCAGCATATCAAATGTGGAAATCTCTAGAAGAACAACTCCTCGCCGTTACAAAAGAAAACGAAATTCACCTCAATGAAGCCATCCTGAGTCTAAAAAAGGGAAGTCTCTCTTTAGATGAGTATTTGAAGAAAACTAAATTGTTTTGTGATCAACTTGCAGCTATGAAGAAACCAGTGGATGATCTCACAAAGGTGTTTCATGTTGCTAGAGGACTAGGAGCTAAATACCATGGATTTAAAACAGCCATGTTGTCCAAAGCACCATATCCAACCTATAATGAGTTCATCCTAGCTCTTAAAGCACATGAGGAAGAGGCAGAGGCAGAGGAAGAAATTTCTCTTTTAGAGGAAGAGGTTTCCCTCAAGGCAGACAAATCGCTCCTGAAAATGCAGGTTACACAAGTCCTCATAAAACGAGCTCTTTCCAAGGGAGACACAAAGATTCAGGGGCGGATTCTTGCTGAAGGAGCAAAGAAAGGAGGGTTGTATGCACTTGATGAGCAGAAACAAAGACAAGAAGCCATGGTTGCAATATCTTCTCAAAATAAGGTGAACAAAATGATAGTAGTACAAGAACATCACATCCAGAAGGCTTATGCCAAATTCCATCGGGTCATCACATGGTTACAAGAAGGAAATTAG
Coding sequence (CDS)
ATGGCTAAACAAGAGACAATTCTTACAATCCAGTCTTTTCACCAATGCTCAAGTCTCATATCAATCAAATTGAGTGTGTCAAACTACCTACTTTGGAAGTCGCAAGTTCTACCACTAGTGAGGAGTCTGGGAATTGAAGACCACCTCAAGGAAAGCAAGAAACCAGAAGAGCTCTTGACTGACAAAGATGGAGAAACTATTCCAAATCCTCAATACAACATTTGGCTCAACAATGATGGCCTTCTAACCTCTTGGCTTCTAGGCATCATAACTGAGGATGTGTTGGCCACAATTGAAGGAACAGATTCAGCATATCAAATGTGGAAATCTCTAGAAGAACAACTCCTCGCCGTTACAAAAGAAAACGAAATTCACCTCAATGAAGCCATCCTGAGTCTAAAAAAGGGAAGTCTCTCTTTAGATGAGTATTTGAAGAAAACTAAATTGTTTTGTGATCAACTTGCAGCTATGAAGAAACCAGTGGATGATCTCACAAAGGTGTTTCATGTTGCTAGAGGACTAGGAGCTAAATACCATGGATTTAAAACAGCCATGTTGTCCAAAGCACCATATCCAACCTATAATGAGTTCATCCTAGCTCTTAAAGCACATGAGGAAGAGGCAGAGGCAGAGGAAGAAATTTCTCTTTTAGAGGAAGAGGTTTCCCTCAAGGCAGACAAATCGCTCCTGAAAATGCAGGTTACACAAGTCCTCATAAAACGAGCTCTTTCCAAGGGAGACACAAAGATTCAGGGGCGGATTCTTGCTGAAGGAGCAAAGAAAGGAGGGTTGTATGCACTTGATGAGCAGAAACAAAGACAAGAAGCCATGGTTGCAATATCTTCTCAAAATAAGGTGAACAAAATGATAGTAGTACAAGAACATCACATCCAGAAGGCTTATGCCAAATTCCATCGGGTCATCACATGGTTACAAGAAGGAAATTAG
Protein sequence
MAKQETILTIQSFHQCSSLISIKLSVSNYLLWKSQVLPLVRSLGIEDHLKESKKPEELLTDKDGETIPNPQYNIWLNNDGLLTSWLLGIITEDVLATIEGTDSAYQMWKSLEEQLLAVTKENEIHLNEAILSLKKGSLSLDEYLKKTKLFCDQLAAMKKPVDDLTKVFHVARGLGAKYHGFKTAMLSKAPYPTYNEFILALKAHEEEAEAEEEISLLEEEVSLKADKSLLKMQVTQVLIKRALSKGDTKIQGRILAEGAKKGGLYALDEQKQRQEAMVAISSQNKVNKMIVVQEHHIQKAYAKFHRVITWLQEGN
Homology
BLAST of Moc09g00970 vs. NCBI nr
Match:
XP_022154021.1 (uncharacterized protein LOC111021379 [Momordica charantia] >XP_022154022.1 uncharacterized protein LOC111021379 [Momordica charantia])
HSP 1 Score: 287.3 bits (734), Expect = 1.6e-73
Identity = 142/213 (66.67%), Postives = 173/213 (81.22%), Query Frame = 0
Query: 1 MAKQETILTIQSFHQCSSLISIKLSVSNYLLWKSQVLPLVRSLGIEDHLKESKKPEELLT 60
MA E +LT+QSFHQCSSLIS+KL+ SNYLLWKSQVLPL+R+LG+E HL E +
Sbjct: 1 MALPENLLTVQSFHQCSSLISLKLNSSNYLLWKSQVLPLIRTLGLEHHLXEEAPVVDECK 60
Query: 61 DKDGETIPNPQYNIWLNNDGLLTSWLLGIITEDVLATIEGTDSAYQMWKSLEEQLLAVTK 120
K+GE+ Q W+NNDGLLTSWLLGII EDVL +EGT++A ++W SLEE LL +TK
Sbjct: 61 GKEGESAXXTQVRTWINNDGLLTSWLLGIIAEDVLTLLEGTETAKEVWHSLEELLLTMTK 120
Query: 121 ENEIHLNEAILSLKKGSLSLDEYLKKTKLFCDQLAAMKKPVDDLTKVFHVARGLGAKYHG 180
ENEIHLNEA+L+LKKGSLS+DEY++K K CD+L AMKKP+DDLTKVFH+ARGLG KY
Sbjct: 121 ENEIHLNEALLTLKKGSLSMDEYIRKFKNLCDRLXAMKKPLDDLTKVFHLARGLGIKYKD 180
Query: 181 FKTAMLSKAPYPTYNEFILALKAHEEEAEAEEE 214
F+TAMLSKAPYP+YN+F+LALKAH++ EEE
Sbjct: 181 FRTAMLSKAPYPSYNQFVLALKAHDQFLTDEEE 213
BLAST of Moc09g00970 vs. NCBI nr
Match:
RVW19921.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])
HSP 1 Score: 234.6 bits (597), Expect = 1.2e-57
Identity = 115/213 (53.99%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 1 MAKQETILTIQSFHQCSSLISIKLSVSNYLLWKSQVLPLVRSLGIEDHLKESKKPEELLT 60
MA E +L+IQ+FHQCSSL+SIKL++SN LLW+SQVLPLVRSLG+ HL E++ E
Sbjct: 15 MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASEETM 74
Query: 61 DKDGETIPNPQYNIWLNNDGLLTSWLLGIITEDVLATIEGTDSAYQMWKSLEEQLLAVTK 120
+ + + W +NDGLLTSWLLG++TE+V+ ++GT++AY +W SL E+LL +TK
Sbjct: 75 GTETKETHDQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTK 134
Query: 121 ENEIHLNEAILSLKKGSLSLDEYLKKTKLFCDQLAAMKKPVDDLTKVFHVARGLGAKYHG 180
E E+ L + +KKG+ SLDEYL++ K CD LAA++KPV DL KVF +A+GLG KY
Sbjct: 135 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMD 194
Query: 181 FKTAMLSKAPYPTYNEFILALKAHEEEAEAEEE 214
F+ AMLSK PYP+YN+F+LAL+ HE+ E E
Sbjct: 195 FRVAMLSKPPYPSYNQFVLALQGHEQMIMTENE 227
BLAST of Moc09g00970 vs. NCBI nr
Match:
RVW43526.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 233.0 bits (593), Expect = 3.5e-57
Identity = 114/213 (53.52%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 1 MAKQETILTIQSFHQCSSLISIKLSVSNYLLWKSQVLPLVRSLGIEDHLKESKKPEELLT 60
MA E +L+IQ+FHQCSSL+SIKL++SN LLW+SQVLPLVRSLG+ HL E++ +
Sbjct: 46 MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASKETM 105
Query: 61 DKDGETIPNPQYNIWLNNDGLLTSWLLGIITEDVLATIEGTDSAYQMWKSLEEQLLAVTK 120
+ + + W +NDGLLTSWLLG++TE+V+ ++GT++AY +W SL E+LL +TK
Sbjct: 106 GTETKETHDQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTK 165
Query: 121 ENEIHLNEAILSLKKGSLSLDEYLKKTKLFCDQLAAMKKPVDDLTKVFHVARGLGAKYHG 180
E E+ L + +KKG+ SLDEYL++ K CD LAA++KPV DL KVF +A+GLG KY
Sbjct: 166 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMD 225
Query: 181 FKTAMLSKAPYPTYNEFILALKAHEEEAEAEEE 214
F+ AMLSK PYP+YN+F+LAL+ HE+ E E
Sbjct: 226 FRVAMLSKPPYPSYNQFVLALQGHEQMIMTENE 258
BLAST of Moc09g00970 vs. NCBI nr
Match:
RVW93768.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])
HSP 1 Score: 232.6 bits (592), Expect = 4.5e-57
Identity = 114/213 (53.52%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 1 MAKQETILTIQSFHQCSSLISIKLSVSNYLLWKSQVLPLVRSLGIEDHLKESKKPEELLT 60
MA E +L+IQ+FHQCSSL+SIKL++SN LLW+SQVLPLVRSLG+ HL E++ E
Sbjct: 1 MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASEETM 60
Query: 61 DKDGETIPNPQYNIWLNNDGLLTSWLLGIITEDVLATIEGTDSAYQMWKSLEEQLLAVTK 120
+ + + W +NDGLLTSWLLG++T++V+ ++GT++AY +W SL E+LL +TK
Sbjct: 61 GTETKETHDQSIETWSHNDGLLTSWLLGLMTKEVMLLLDGTETAYDVWNSLGEKLLPMTK 120
Query: 121 ENEIHLNEAILSLKKGSLSLDEYLKKTKLFCDQLAAMKKPVDDLTKVFHVARGLGAKYHG 180
E E+ L + +KKG+ SLDEYL++ K CD LAA++KPV DL KVF +A+GLG KY
Sbjct: 121 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMD 180
Query: 181 FKTAMLSKAPYPTYNEFILALKAHEEEAEAEEE 214
F+ AMLSK PYP+YN+F+LAL+ HE+ E E
Sbjct: 181 FRVAMLSKPPYPSYNQFVLALQGHEQMIMIENE 213
BLAST of Moc09g00970 vs. NCBI nr
Match:
CAN74381.1 (hypothetical protein VITISV_007944 [Vitis vinifera])
HSP 1 Score: 230.3 bits (586), Expect = 2.2e-56
Identity = 113/213 (53.05%), Postives = 154/213 (72.30%), Query Frame = 0
Query: 1 MAKQETILTIQSFHQCSSLISIKLSVSNYLLWKSQVLPLVRSLGIEDHLKESKKPEELLT 60
MA E +L+IQ+FHQCSSL+SIKL++SN LLW+SQVLPLVRSLG+ HL E++
Sbjct: 1 MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASXETM 60
Query: 61 DKDGETIPNPQYNIWLNNDGLLTSWLLGIITEDVLATIEGTDSAYQMWKSLEEQLLAVTK 120
+ + + W +NDGLLTSWLLG++TE+V+ ++GT++AY +W SL E+LL +TK
Sbjct: 61 GTETKETHDQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTK 120
Query: 121 ENEIHLNEAILSLKKGSLSLDEYLKKTKLFCDQLAAMKKPVDDLTKVFHVARGLGAKYHG 180
E E+ L + +KKG+ SLDEYL++ K CD LAA++KPV DL K F +A+GLG KY
Sbjct: 121 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKXFQLAQGLGTKYMD 180
Query: 181 FKTAMLSKAPYPTYNEFILALKAHEEEAEAEEE 214
F+ AMLSK PYP+YN+F+LAL+ HE+ E E
Sbjct: 181 FRVAMLSKPPYPSYNQFVLALQGHEQMIMTENE 213
BLAST of Moc09g00970 vs. ExPASy TrEMBL
Match:
A0A6J1DMG5 (uncharacterized protein LOC111021379 OS=Momordica charantia OX=3673 GN=LOC111021379 PE=4 SV=1)
HSP 1 Score: 287.3 bits (734), Expect = 7.5e-74
Identity = 142/213 (66.67%), Postives = 173/213 (81.22%), Query Frame = 0
Query: 1 MAKQETILTIQSFHQCSSLISIKLSVSNYLLWKSQVLPLVRSLGIEDHLKESKKPEELLT 60
MA E +LT+QSFHQCSSLIS+KL+ SNYLLWKSQVLPL+R+LG+E HL E +
Sbjct: 1 MALPENLLTVQSFHQCSSLISLKLNSSNYLLWKSQVLPLIRTLGLEHHLXEEAPVVDECK 60
Query: 61 DKDGETIPNPQYNIWLNNDGLLTSWLLGIITEDVLATIEGTDSAYQMWKSLEEQLLAVTK 120
K+GE+ Q W+NNDGLLTSWLLGII EDVL +EGT++A ++W SLEE LL +TK
Sbjct: 61 GKEGESAXXTQVRTWINNDGLLTSWLLGIIAEDVLTLLEGTETAKEVWHSLEELLLTMTK 120
Query: 121 ENEIHLNEAILSLKKGSLSLDEYLKKTKLFCDQLAAMKKPVDDLTKVFHVARGLGAKYHG 180
ENEIHLNEA+L+LKKGSLS+DEY++K K CD+L AMKKP+DDLTKVFH+ARGLG KY
Sbjct: 121 ENEIHLNEALLTLKKGSLSMDEYIRKFKNLCDRLXAMKKPLDDLTKVFHLARGLGIKYKD 180
Query: 181 FKTAMLSKAPYPTYNEFILALKAHEEEAEAEEE 214
F+TAMLSKAPYP+YN+F+LALKAH++ EEE
Sbjct: 181 FRTAMLSKAPYPSYNQFVLALKAHDQFLTDEEE 213
BLAST of Moc09g00970 vs. ExPASy TrEMBL
Match:
A0A438C9J9 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_1040 PE=4 SV=1)
HSP 1 Score: 234.6 bits (597), Expect = 5.8e-58
Identity = 115/213 (53.99%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 1 MAKQETILTIQSFHQCSSLISIKLSVSNYLLWKSQVLPLVRSLGIEDHLKESKKPEELLT 60
MA E +L+IQ+FHQCSSL+SIKL++SN LLW+SQVLPLVRSLG+ HL E++ E
Sbjct: 15 MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASEETM 74
Query: 61 DKDGETIPNPQYNIWLNNDGLLTSWLLGIITEDVLATIEGTDSAYQMWKSLEEQLLAVTK 120
+ + + W +NDGLLTSWLLG++TE+V+ ++GT++AY +W SL E+LL +TK
Sbjct: 75 GTETKETHDQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTK 134
Query: 121 ENEIHLNEAILSLKKGSLSLDEYLKKTKLFCDQLAAMKKPVDDLTKVFHVARGLGAKYHG 180
E E+ L + +KKG+ SLDEYL++ K CD LAA++KPV DL KVF +A+GLG KY
Sbjct: 135 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMD 194
Query: 181 FKTAMLSKAPYPTYNEFILALKAHEEEAEAEEE 214
F+ AMLSK PYP+YN+F+LAL+ HE+ E E
Sbjct: 195 FRVAMLSKPPYPSYNQFVLALQGHEQMIMTENE 227
BLAST of Moc09g00970 vs. ExPASy TrEMBL
Match:
A0A438E6Z5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1575 PE=4 SV=1)
HSP 1 Score: 233.0 bits (593), Expect = 1.7e-57
Identity = 114/213 (53.52%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 1 MAKQETILTIQSFHQCSSLISIKLSVSNYLLWKSQVLPLVRSLGIEDHLKESKKPEELLT 60
MA E +L+IQ+FHQCSSL+SIKL++SN LLW+SQVLPLVRSLG+ HL E++ +
Sbjct: 46 MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASKETM 105
Query: 61 DKDGETIPNPQYNIWLNNDGLLTSWLLGIITEDVLATIEGTDSAYQMWKSLEEQLLAVTK 120
+ + + W +NDGLLTSWLLG++TE+V+ ++GT++AY +W SL E+LL +TK
Sbjct: 106 GTETKETHDQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTK 165
Query: 121 ENEIHLNEAILSLKKGSLSLDEYLKKTKLFCDQLAAMKKPVDDLTKVFHVARGLGAKYHG 180
E E+ L + +KKG+ SLDEYL++ K CD LAA++KPV DL KVF +A+GLG KY
Sbjct: 166 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMD 225
Query: 181 FKTAMLSKAPYPTYNEFILALKAHEEEAEAEEE 214
F+ AMLSK PYP+YN+F+LAL+ HE+ E E
Sbjct: 226 FRVAMLSKPPYPSYNQFVLALQGHEQMIMTENE 258
BLAST of Moc09g00970 vs. ExPASy TrEMBL
Match:
A0A438IAM2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_3180 PE=4 SV=1)
HSP 1 Score: 232.6 bits (592), Expect = 2.2e-57
Identity = 114/213 (53.52%), Postives = 156/213 (73.24%), Query Frame = 0
Query: 1 MAKQETILTIQSFHQCSSLISIKLSVSNYLLWKSQVLPLVRSLGIEDHLKESKKPEELLT 60
MA E +L+IQ+FHQCSSL+SIKL++SN LLW+SQVLPLVRSLG+ HL E++ E
Sbjct: 1 MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASEETM 60
Query: 61 DKDGETIPNPQYNIWLNNDGLLTSWLLGIITEDVLATIEGTDSAYQMWKSLEEQLLAVTK 120
+ + + W +NDGLLTSWLLG++T++V+ ++GT++AY +W SL E+LL +TK
Sbjct: 61 GTETKETHDQSIETWSHNDGLLTSWLLGLMTKEVMLLLDGTETAYDVWNSLGEKLLPMTK 120
Query: 121 ENEIHLNEAILSLKKGSLSLDEYLKKTKLFCDQLAAMKKPVDDLTKVFHVARGLGAKYHG 180
E E+ L + +KKG+ SLDEYL++ K CD LAA++KPV DL KVF +A+GLG KY
Sbjct: 121 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKVFQLAQGLGTKYMD 180
Query: 181 FKTAMLSKAPYPTYNEFILALKAHEEEAEAEEE 214
F+ AMLSK PYP+YN+F+LAL+ HE+ E E
Sbjct: 181 FRVAMLSKPPYPSYNQFVLALQGHEQMIMIENE 213
BLAST of Moc09g00970 vs. ExPASy TrEMBL
Match:
A5BC00 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_007944 PE=4 SV=1)
HSP 1 Score: 230.3 bits (586), Expect = 1.1e-56
Identity = 113/213 (53.05%), Postives = 154/213 (72.30%), Query Frame = 0
Query: 1 MAKQETILTIQSFHQCSSLISIKLSVSNYLLWKSQVLPLVRSLGIEDHLKESKKPEELLT 60
MA E +L+IQ+FHQCSSL+SIKL++SN LLW+SQVLPLVRSLG+ HL E++
Sbjct: 1 MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASXETM 60
Query: 61 DKDGETIPNPQYNIWLNNDGLLTSWLLGIITEDVLATIEGTDSAYQMWKSLEEQLLAVTK 120
+ + + W +NDGLLTSWLLG++TE+V+ ++GT++AY +W SL E+LL +TK
Sbjct: 61 GTETKETHDQSIETWSHNDGLLTSWLLGLMTEEVMLLLDGTETAYDVWNSLGEKLLPMTK 120
Query: 121 ENEIHLNEAILSLKKGSLSLDEYLKKTKLFCDQLAAMKKPVDDLTKVFHVARGLGAKYHG 180
E E+ L + +KKG+ SLDEYL++ K CD LAA++KPV DL K F +A+GLG KY
Sbjct: 121 EKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAAVRKPVSDLDKXFQLAQGLGTKYMD 180
Query: 181 FKTAMLSKAPYPTYNEFILALKAHEEEAEAEEE 214
F+ AMLSK PYP+YN+F+LAL+ HE+ E E
Sbjct: 181 FRVAMLSKPPYPSYNQFVLALQGHEQMIMTENE 213
BLAST of Moc09g00970 vs. TAIR 10
Match:
AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 71.6 bits (174), Expect = 1.2e-12
Identity = 52/199 (26.13%), Postives = 83/199 (41.71%), Query Frame = 0
Query: 20 ISIKLSVSNYLLWKSQVLPLVRSLGIEDHLKESKKPEELLTDKDGETIPNPQ-YNIWLNN 79
+++ L+ NY +W+ L S G+ H+ DG + P P W
Sbjct: 24 VTLDLNKLNYDVWRELFETLCLSFGVLGHI-------------DGSSTPTPMTEKRWKER 83
Query: 80 DGLLTSWLLGIITEDVLATIEGTD-SAYQMWKSLEEQLLAVTKENEIHLNEAILSLKKGS 139
DGL+ W+ G IT+ +L TI +A +W SLE + + + +
Sbjct: 84 DGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTIDD 143
Query: 140 LSLDEYLKKTKLFCDQLAAMKKPVDDLTKVFHVARGLGAKYHGFKTAMLSKAPYPTYNEF 199
LS+ EY +K K D L + P+ D V H+ GL KY + K+P+P++ E
Sbjct: 144 LSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEA 203
Query: 200 ILALKAHEEEAEAEEEISL 217
L E + + SL
Sbjct: 204 RSMLLMEESRLSNKSKSSL 209
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022154021.1 | 1.6e-73 | 66.67 | uncharacterized protein LOC111021379 [Momordica charantia] >XP_022154022.1 uncha... | [more] |
| RVW19921.1 | 1.2e-57 | 53.99 | Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | [more] |
| RVW43526.1 | 3.5e-57 | 53.52 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
| RVW93768.1 | 4.5e-57 | 53.52 | Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | [more] |
| CAN74381.1 | 2.2e-56 | 53.05 | hypothetical protein VITISV_007944 [Vitis vinifera] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DMG5 | 7.5e-74 | 66.67 | uncharacterized protein LOC111021379 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
| A0A438C9J9 | 5.8e-58 | 53.99 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... | [more] |
| A0A438E6Z5 | 1.7e-57 | 53.52 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
| A0A438IAM2 | 2.2e-57 | 53.52 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... | [more] |
| A5BC00 | 1.1e-56 | 53.05 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_007944 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G48050.1 | 1.2e-12 | 26.13 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |
