Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGATGAAGATTGGGTGGAGACAAATGAACAGGCAGTTGCCTTTATCAGATTGTGTATGAATGTGGCAAGTCTCGTAGTAAACGAAACGACAGCAATATATCTGATGAAAGCACTGGAGAATAGGTACAAGAAACCTTTAGCTAATAATAAGGTATATCTCGTAAGGAGATTCTTTAACATTCAAATGGAAGAGAATACTTCTGTCAATTCCCACATAAATGAGATCACAAAATTAATCAATCAATTGGCATCGGTTAAGATTACTTTTAGTGACGAAGTGAATGCTATTCAGTTGCTAACATCTTTACCTAAAAGTTGGGAAACGATGAAGACAGCAGTGTCCAATTCGTTAGAAGACAAATCTTTGAAATTTTCAGAAATTTGTGATGCGGCAATTGCTGAAAAAATTCGCAGAGAGGAGAGTGGAAAAGAATCTACTTCCGTACAAAAGCTCAGCATTGGCTGTCGAAAAAGGTAAAGAGAAGGTTGTGTTTGATGACAGGCAATAAAAGCATAGTAGGAGGGATTGGAAGAGAGATGTTGAATGTTTTCACAACCACAAAAAAGGCCACATCAAGAAAAACTGTAGAATATTAAAAGAAGATCTGAAAAGGTATATGGCGGAGTCAAATGCAGTTGTAGACGATACCCTCGTCTCTGTTGCAAGCAACACAGAAACAGAAAACCAGTCATCGGAGTGGCTAATAGACAGCTCAGCTTCAGTACACATATCTTCAAATAGAAGATTATTCACATCTTTCAGAAGAGGCAATCACAGCCACGTGAGGATGTGGAATGGAAGACTTTCCAAGACTAAAGGGATCGGAAATGTACGATTGAAGATTGATAGTGGGACCGAGTTATTAGTGCGAGATGTCAGGTATGTACCCAATATTAGAATGAACTTTATCTCTACAGGTAAGTTGGACAATGATGGTTATCAGAGTGAGTTTGGTGGGAACCAGTGGAAGCTCACCAAAGGATCCAAGTTGGTGACAATTGGCCATAGAAGATCTACAGTTTACACATCGCAATTGAGTGTTGCCAGAGGATCATTGAAACAGTGGATGCAAGTTGCAGATGGTGTCCAAAGAAGTAGGACTAAGCCAGCAACAAAGACAACCTGAACAGATCAGGAGGATTTGCCATCAATTCAGGAACAACAATTGGGAAGTCAGAGAACGAGAACAGGTTCTTTAGGTTGTCTGGGATTATCTCCAATTGTCAGACGAATGGGTGAATTGATGAAGTCGCGTCAGTGAAAAGTTGCATCAGAGAAGATGAACTCAGTAGGTGCTGAGGTAAAGAATGAAGTTTCAATTCTGGCAGCAGTGGGGAGTTCTTTCTTCAAGAATCAGTGTTTGAGAATGAAGAAGGAAGCTTCAGATATCGCCACTTAGTTTGAGTGGGAACACGTGGCTATGTCTCTTGCATTTGGGAGACAAGACCACGTAGATTGTCTAACCGCAGGGCAAAGACAGATGAGACCAGTGATTTCTGATATTTTGTTGTACAAATTTTTAAACTTGCAGGAGAAGCCTTGAAGATTTTTTCAAGAAGATTAGAAGTTGTTGCAATAGAAGCCTTGAAGTTTTCCAAGATTATCAAAGACTATTGTTGCAGTGGGAAGCAAGATCGATGTTTTGTCTCCAAGTGGGAGATTGTTGGGATAATGGAGTCAAAACAGATGACCAGTGTCCTACGAGGAAAATGA
mRNA sequence
ATGAAAGATGAAGATTGGGTGGAGACAAATGAACAGGCAGTTGCCTTTATCAGATTGTGTATGAATGTGGCAAGTCTCGTAGTAAACGAAACGACAGCAATATATCTGATGAAAGCACTGGAGAATAGGTACAAGAAACCTTTAGCTAATAATAAGGTATATCTCGTAAGGAGATTCTTTAACATTCAAATGGAAGAGAATACTTCTGTCAATTCCCACATAAATGAGATCACAAAATTAATCAATCAATTGGCATCGGTTAAGATTACTTTTAGTGACGAAGTGAATGCTATTCAGTTGCTAACATCTTTACCTAAAAGTTGGGAAACGATGAAGACAGCAGTGTCCAATTCGTTAGAAGACAAATCTTTGAAATTTTCAGAAATTTGTGATGCGGCAATTGCTGAAAAAATTCGCAGAGAGGAGAGTGGAAAAGAATCTACTTCCGTACAAAAGCTCAGCATTGGCTGTCGAAAAAGGTATATGGCGGAGTCAAATGCAGTTGTAGACGATACCCTCGTCTCTGTTGCAAGCAACACAGAAACAGAAAACCAGTCATCGGAGTGGCTAATAGACAGCTCAGCTTCAGTACACATATCTTCAAATAGAAGATTATTCACATCTTTCAGAAGAGGCAATCACAGCCACGTGAGGATGTGGAATGGAAGACTTTCCAAGACTAAAGGGATCGGAAATAGTGAGTTTGGTGGGAACCAGTGGAAGCTCACCAAAGGATCCAAGTTGGTGACAATTGGCCATAGAAGATCTACAGTTTACACATCGCAATTGAGTGTTGCCAGAGGATCATTGAAACAGTGGATGCAAGTTGCAGATGGTGTCCAAAGAAGAGAAGCCTTGAAGATTTTTTCAAGAAGATTAGAAGTTGTTGCAATAGAAGCCTTGAAGTTTTCCAAGATTATCAAAGACTATTGTTGCAGTGGGAAGCAAGATCGATGTTTTGTCTCCAAGTGGGAGATTGTTGGGATAATGGAGTCAAAACAGATGACCAGTGTCCTACGAGGAAAATGA
Coding sequence (CDS)
ATGAAAGATGAAGATTGGGTGGAGACAAATGAACAGGCAGTTGCCTTTATCAGATTGTGTATGAATGTGGCAAGTCTCGTAGTAAACGAAACGACAGCAATATATCTGATGAAAGCACTGGAGAATAGGTACAAGAAACCTTTAGCTAATAATAAGGTATATCTCGTAAGGAGATTCTTTAACATTCAAATGGAAGAGAATACTTCTGTCAATTCCCACATAAATGAGATCACAAAATTAATCAATCAATTGGCATCGGTTAAGATTACTTTTAGTGACGAAGTGAATGCTATTCAGTTGCTAACATCTTTACCTAAAAGTTGGGAAACGATGAAGACAGCAGTGTCCAATTCGTTAGAAGACAAATCTTTGAAATTTTCAGAAATTTGTGATGCGGCAATTGCTGAAAAAATTCGCAGAGAGGAGAGTGGAAAAGAATCTACTTCCGTACAAAAGCTCAGCATTGGCTGTCGAAAAAGGTATATGGCGGAGTCAAATGCAGTTGTAGACGATACCCTCGTCTCTGTTGCAAGCAACACAGAAACAGAAAACCAGTCATCGGAGTGGCTAATAGACAGCTCAGCTTCAGTACACATATCTTCAAATAGAAGATTATTCACATCTTTCAGAAGAGGCAATCACAGCCACGTGAGGATGTGGAATGGAAGACTTTCCAAGACTAAAGGGATCGGAAATAGTGAGTTTGGTGGGAACCAGTGGAAGCTCACCAAAGGATCCAAGTTGGTGACAATTGGCCATAGAAGATCTACAGTTTACACATCGCAATTGAGTGTTGCCAGAGGATCATTGAAACAGTGGATGCAAGTTGCAGATGGTGTCCAAAGAAGAGAAGCCTTGAAGATTTTTTCAAGAAGATTAGAAGTTGTTGCAATAGAAGCCTTGAAGTTTTCCAAGATTATCAAAGACTATTGTTGCAGTGGGAAGCAAGATCGATGTTTTGTCTCCAAGTGGGAGATTGTTGGGATAATGGAGTCAAAACAGATGACCAGTGTCCTACGAGGAAAATGA
Protein sequence
MKDEDWVETNEQAVAFIRLCMNVASLVVNETTAIYLMKALENRYKKPLANNKVYLVRRFFNIQMEENTSVNSHINEITKLINQLASVKITFSDEVNAIQLLTSLPKSWETMKTAVSNSLEDKSLKFSEICDAAIAEKIRREESGKESTSVQKLSIGCRKRYMAESNAVVDDTLVSVASNTETENQSSEWLIDSSASVHISSNRRLFTSFRRGNHSHVRMWNGRLSKTKGIGNSEFGGNQWKLTKGSKLVTIGHRRSTVYTSQLSVARGSLKQWMQVADGVQRREALKIFSRRLEVVAIEALKFSKIIKDYCCSGKQDRCFVSKWEIVGIMESKQMTSVLRGK
Homology
BLAST of Moc08g37020 vs. NCBI nr
Match:
RVW60263.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 153.7 bits (387), Expect = 2.9e-33
Identity = 101/268 (37.69%), Postives = 153/268 (57.09%), Query Frame = 0
Query: 1 MKDEDWVETNEQAVAFIRLCM--NVASLVVNETTAIYLMKALENRYKKPLANNKVYLVRR 60
MK E+W + Q + IRL + +VA VV E T LMKAL Y+KP ANNKV+L+++
Sbjct: 47 MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKK 106
Query: 61 FFNIQMEENTSVNSHINEITKLINQLASVKITFSDEVNAIQLLTSLPKSWETMKTAVSNS 120
FN++M EN SV H+NE + NQL+SV+I F DE+ A+ +L SLP SWE M+ AVSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166
Query: 121 LEDKSLKFSEICDAAIAEKIRREESGKESTSVQKLSIGCRKRYMAESNAVVDDTLVSVAS 180
+ LK+++I D +AE+IRR ++G+ S S L++ R R V D L++V S
Sbjct: 167 TGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNLETRGR-----EEVQDALLLAVDS 226
Query: 181 NTETENQSSEWLIDSSASVHISSNRRLFTSFRRGNHSHVRMWNGRLSKTKGIGNSEF--- 240
+ +W++DS AS H + +R + ++ G+ V + +G G+G+
Sbjct: 227 PLD------DWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLP 286
Query: 241 GGNQWKLTKGSKLVTIGHRRSTVYTSQL 264
G+ W L K + + RR+ + QL
Sbjct: 287 NGSVWLLEKVRHIPDL--RRNLISVGQL 301
BLAST of Moc08g37020 vs. NCBI nr
Match:
RVW82472.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 149.8 bits (377), Expect = 4.2e-32
Identity = 117/371 (31.54%), Postives = 189/371 (50.94%), Query Frame = 0
Query: 1 MKDEDWVETNEQAVAFIRLCM--NVASLVVNETTAIYLMKALENRYKKPLANNKVYLVRR 60
MK E+W + Q + IRL + +VA VV E T LMKAL Y+KP ANNKV+L+++
Sbjct: 47 MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKK 106
Query: 61 FFNIQMEENTSVNSHINEITKLINQLASVKITFSDEVNAIQLLTSLPKSWETMKTAVSNS 120
FN++M EN SV H+NE + NQL+SV+I F DE+ A+ +L SLP SWE M+ AVSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166
Query: 121 LEDKSLKFSEICDAAIAEKIRREESGKESTSVQKLSIGCR--------------KRYMAE 180
+ LK+++I D +AE+IRR ++G+ S S L++ R K
Sbjct: 167 TGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNLETRGRGHFKRQCKSPKKKNEDDS 226
Query: 181 SNAVVDDTLVSVASNTETENQSSEWLIDSSASVHISSNRRLFTSFRRGNHSHVRMWNGRL 240
+NAV ++ V A ++ +W++DS AS H + +R + ++ G+ V + +G
Sbjct: 227 ANAVTEE--VQDALLLAVDSPLDDWVLDSRASFHTTPHREIIQNYVAGDFGKVYLADGSA 286
Query: 241 SKTKGIGNSEF---GGNQWKLTKGSKLVTIGHRRSTVYTSQLSVARGSLKQWMQVAD--- 300
G+G+ G+ W L K + + RR+ + QL G ++ VAD
Sbjct: 287 LDVVGLGDVRISLPNGSIWLLEKVRHIPDL--RRNLISVGQLD-DEGHAILFVGVADAST 346
Query: 301 ---------GVQRREALKIFSRRLEVVAIEALKFSKIIKDYCCSGKQDRCFVSKWEIVGI 341
G + +K+ + ++ ++++ F + + C GKQ + KW+ +
Sbjct: 347 DTSLWHRRLGHMSEKGMKMLLSKGKLPELKSIDFD--MCESCILGKQKK----KWKAMVE 406
BLAST of Moc08g37020 vs. NCBI nr
Match:
RVW34240.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 149.4 bits (376), Expect = 5.5e-32
Identity = 98/271 (36.16%), Postives = 150/271 (55.35%), Query Frame = 0
Query: 1 MKDEDWVETNEQAVAFIRLCM--NVASLVVNETTAIYLMKALENRYKKPLANNKVYLVRR 60
MK E+W + Q + IRL + +VA VV E T LMKAL Y+KP ANNKV+L+++
Sbjct: 47 MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKK 106
Query: 61 FFNIQMEENTSVNSHINEITKLINQLASVKITFSDEVNAIQLLTSLPKSWETMKTAVSNS 120
FN++M EN SV H+NE + NQL+SV+I F DE+ A+ +L SLP SWE M+ AVSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166
Query: 121 LEDKSLKFSEICDAAIAEKIRREESGKESTSVQKLSIGCR--------------KRYMAE 180
+ LK+++I D +AE+IRR ++G+ S S L++ R K
Sbjct: 167 TGKEKLKYNDIRDLILAEEIRRRDAGETSGSSSALNLETRGRGHFKRQCKSPKKKNEDDS 226
Query: 181 SNAVVDDTLVSVASNTETENQSSEWLIDSSASVHISSNRRLFTSFRRGNHSHVRMWNGRL 240
+NAV ++ V A ++ +W++DS AS H + +R + ++ G+ V + +G
Sbjct: 227 ANAVTEE--VQDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSA 286
Query: 241 SKTKGIGNSEF---GGNQWKLTKGSKLVTIG 253
G+G+ G+ W L K + +G
Sbjct: 287 LDVVGLGDVRISLPNGSVWLLEKVRHIPDLG 315
BLAST of Moc08g37020 vs. NCBI nr
Match:
RVX07359.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 149.1 bits (375), Expect = 7.2e-32
Identity = 97/268 (36.19%), Postives = 150/268 (55.97%), Query Frame = 0
Query: 1 MKDEDWVETNEQAVAFIRLCM--NVASLVVNETTAIYLMKALENRYKKPLANNKVYLVRR 60
MK E+W + Q + IRL + +VA VV E T LMKAL Y+KP ANNKV+L+++
Sbjct: 1 MKAEEWALLDRQVLGVIRLTLSKSVAHNVVKEKTTTDLMKALSGMYEKPSANNKVHLMKK 60
Query: 61 FFNIQMEENTSVNSHINEITKLINQLASVKITFSDEVNAIQLLTSLPKSWETMKTAVSNS 120
FN++M EN SV H+NE + NQL+SV+I F DE+ A+ +L SLP SWETMK AVSNS
Sbjct: 61 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWETMKMAVSNS 120
Query: 121 LEDKSLKFSEICDAAIAEKIRREESGKESTSVQKLSIGCRKRYMAESNAVVDDTLVSVAS 180
+ LK+++I +AE+IR ++ + S S L++ R R A + V
Sbjct: 121 TGKEKLKYNDIRYLILAEEIRLRDASETSGSGSALNLETRSRDQANK---YNAGTVGKQV 180
Query: 181 NTETENQSSEWLIDSSASVHISSNRRLFTSFRRGNHSHVRMWNGRLSKTKGIGNSEF--- 240
+ ++ +W++DS AS H + +R + ++ G+ V + +G G+G+
Sbjct: 181 TLKVDSPLDDWILDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLP 240
Query: 241 GGNQWKLTKGSKLVTIGHRRSTVYTSQL 264
G+ W L K ++ + RR+ + QL
Sbjct: 241 NGSVWLLEKVRHILDL--RRNLISVGQL 263
BLAST of Moc08g37020 vs. NCBI nr
Match:
RVW73393.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 149.1 bits (375), Expect = 7.2e-32
Identity = 101/282 (35.82%), Postives = 155/282 (54.96%), Query Frame = 0
Query: 1 MKDEDWVETNEQAVAFIRLCM--NVASLVVNETTAIYLMKALENRYKKPLANNKVYLVRR 60
MK E+W + Q + IRL + +VA VV E T LMKAL Y+KP ANNKV+L+++
Sbjct: 47 MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKK 106
Query: 61 FFNIQMEENTSVNSHINEITKLINQLASVKITFSDEVNAIQLLTSLPKSWETMKTAVSNS 120
FN++M EN SV H+NE + NQL+SV+I F DE+ A+ +L SLP SWE M+ AVSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166
Query: 121 LEDKSLKFSEICDAAIAEKIRREESGKESTSVQKLSIGCR--------------KRYMAE 180
+ LK+++I D +AE+IRR ++G+ S S L++ R K
Sbjct: 167 TGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNLETRGRGHFKRQCKSPKKKNEDDS 226
Query: 181 SNAVVDDTLVSVASNTETENQSSEWLIDSSASVHISSNRRLFTSFRRGNHSHVRMWNGRL 240
+NAV ++ V A ++ +W++DS AS H + +R + ++ G+ V + +G
Sbjct: 227 ANAVTEE--VQDALLLAVDSPLDDWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSA 286
Query: 241 SKTKGIGNSEF---GGNQWKLTKGSKLVTIGHRRSTVYTSQL 264
G+G+ G+ W L K + + RR+ + QL
Sbjct: 287 LDVVGLGDVRISLPNGSVWLLEKVRHIPDL--RRNLISVGQL 324
BLAST of Moc08g37020 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 8.0e-18
Identity = 104/421 (24.70%), Postives = 172/421 (40.86%), Query Frame = 0
Query: 1 MKDEDWVETNEQAVAFIRLCM--NVASLVVNETTAIYLMKALENRYKKPLANNKVYLVRR 60
MK EDW + +E+A + IRL + +V + +++E TA + LE+ Y NK+YL ++
Sbjct: 47 MKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQ 106
Query: 61 FFNIQMEENTSVNSHINEITKLINQLASVKITFSDEVNAIQLLTSLPKSWETMKTAVSNS 120
+ + M E T+ SH+N LI QLA++ + +E AI LL SLP S++ + T + +
Sbjct: 107 LYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHG 166
Query: 121 --------------LEDKSLKFSEICDAAIAEKIR----------------REESGKEST 180
L +K K E A+ + R R +S S
Sbjct: 167 KTTIELKDVTSALLLNEKMRKKPENQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSK 226
Query: 181 SVQKLSIGC-------------RKRYMAESNAVVDDTLVSVASNTET------------- 240
S + C RK S DD ++ N +
Sbjct: 227 SRVRNCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMH 286
Query: 241 -ENQSSEWLIDSSASVHISSNRRLFTSFRRGNHSHVRMWNGRLSKTKGIGN--------- 300
SEW++D++AS H + R LF + G+ V+M N SK GIG+
Sbjct: 287 LSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGC 346
Query: 301 -----------------------------SEFGGNQWKLTKGSKLVTIGHRRSTVYTSQL 319
S F +W+LTKGS ++ G R T+Y +
Sbjct: 347 TLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNA 406
BLAST of Moc08g37020 vs. ExPASy TrEMBL
Match:
A0A438FJS0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_4031 PE=4 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 1.4e-33
Identity = 101/268 (37.69%), Postives = 153/268 (57.09%), Query Frame = 0
Query: 1 MKDEDWVETNEQAVAFIRLCM--NVASLVVNETTAIYLMKALENRYKKPLANNKVYLVRR 60
MK E+W + Q + IRL + +VA VV E T LMKAL Y+KP ANNKV+L+++
Sbjct: 47 MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKK 106
Query: 61 FFNIQMEENTSVNSHINEITKLINQLASVKITFSDEVNAIQLLTSLPKSWETMKTAVSNS 120
FN++M EN SV H+NE + NQL+SV+I F DE+ A+ +L SLP SWE M+ AVSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166
Query: 121 LEDKSLKFSEICDAAIAEKIRREESGKESTSVQKLSIGCRKRYMAESNAVVDDTLVSVAS 180
+ LK+++I D +AE+IRR ++G+ S S L++ R R V D L++V S
Sbjct: 167 TGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNLETRGR-----EEVQDALLLAVDS 226
Query: 181 NTETENQSSEWLIDSSASVHISSNRRLFTSFRRGNHSHVRMWNGRLSKTKGIGNSEF--- 240
+ +W++DS AS H + +R + ++ G+ V + +G G+G+
Sbjct: 227 PLD------DWVLDSGASFHTTPHREIIQNYVAGDFGKVYLADGSALDVVGLGDVRISLP 286
Query: 241 GGNQWKLTKGSKLVTIGHRRSTVYTSQL 264
G+ W L K + + RR+ + QL
Sbjct: 287 NGSVWLLEKVRHIPDL--RRNLISVGQL 301
BLAST of Moc08g37020 vs. ExPASy TrEMBL
Match:
A0A2N9GH12 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29668 PE=4 SV=1)
HSP 1 Score: 153.3 bits (386), Expect = 1.8e-33
Identity = 100/291 (34.36%), Postives = 158/291 (54.30%), Query Frame = 0
Query: 1 MKDEDWVETNEQAVAFIRLCM--NVASLVVNETTAIYLMKALENRYKKPLANNKVYLVRR 60
M+D +W + Q + IRL + +VA VV ETT + LM AL Y+KP NNKV+L+++
Sbjct: 24 MEDAEWALLDRQVLGVIRLTLSKSVAHNVVKETTTVGLMTALSGMYEKPSTNNKVHLMKK 83
Query: 61 FFNIQMEENTSVNSHINEITKLINQLASVKITFSDEVNAIQLLTSLPKSWETMKTAVSNS 120
FN++M E+ +V H+NE + NQL+SV+I F DE+ A+ +L SLP SWE M+ AV+NS
Sbjct: 84 LFNLKMAESATVAKHLNEFNTITNQLSSVEIEFDDEIRALIVLASLPNSWEAMRMAVNNS 143
Query: 121 LEDKSLKFSEICDAAIAEKIRREESGKESTSVQKLSIGCRKRYMAE-----SNAVVDDTL 180
LK+ I D ++E++RR ++ ++ Q R + + VVDD
Sbjct: 144 AGKDKLKYENIRDLILSEEVRRRDACIDNAKGQAFVTENRDKDHKHDDEKGTTVVVDDEK 203
Query: 181 VSVASNTE-----TENQSSEWLIDSSASVHISSNRRLFTSFRRGNHSHVRMWNGRLSKTK 240
V V S E +N EW+++S+A+ H+ ++ LFT+++ G+ V+M N SK
Sbjct: 204 VVVLSVQEQKCEHVDNIDDEWVVNSAATHHVVRSKELFTTYKAGDFGTVKMGNTSYSKIV 263
Query: 241 GIGNSEFGGN------------QWKLTKGSKLVTIGHRRSTVYTSQLSVAR 268
GIG+ N +WKL KG +V G +Y +++ +
Sbjct: 264 GIGDVCIKNNVGFTVMLKNANGRWKLAKGPMVVARGRICCGLYRTRVKACK 314
BLAST of Moc08g37020 vs. ExPASy TrEMBL
Match:
A0A2N9GZ72 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35439 PE=4 SV=1)
HSP 1 Score: 152.9 bits (385), Expect = 2.4e-33
Identity = 106/331 (32.02%), Postives = 167/331 (50.45%), Query Frame = 0
Query: 1 MKDEDWVETNEQAVAFIRLCM--NVASLVVNETTAIYLMKALENRYKKPLANNKVYLVRR 60
M+D +W + Q + IRL + ++A VV ETT + LM AL Y+KP ANNKV+L+++
Sbjct: 47 MEDAEWALLDRQVLGVIRLTLSRSIAHNVVKETTTVGLMTALSGMYEKPSANNKVHLMKK 106
Query: 61 FFNIQMEENTSVNSHINEITKLINQLASVKITFSDEVNAIQLLTSLPKSWETMKTAVSNS 120
FN++M E +V H+NE + NQL+SV+I F DE+ A+ +L SLP SWE M+ AVSNS
Sbjct: 107 LFNLKMAEGAAVAKHLNEFNTITNQLSSVEIEFDDEIRALIVLASLPNSWEAMRMAVSNS 166
Query: 121 LEDKSLKFSEICDAAIAEKIRREESGKESTSVQKLSIGCRKRYMAE-----SNAVVDDTL 180
LK+ +I D ++E++RR ++ ++ Q R + + AVVDD
Sbjct: 167 AGKGKLKYDDIRDLILSEEVRRRDACIDNAEGQAFVTENRDKDHKHDDEKGTTAVVDDEE 226
Query: 181 VSVASNTE-----TENQSSEWLIDSSASVHISSNRRLFTSFRRGNHSHVRMWNGRLSKTK 240
V V S E +N EW++DS+A+ H+ + LFT+++ G+ V+M N SK
Sbjct: 227 VVVLSVQEQKCEHVDNIDDEWVVDSAATHHVVRTKELFTTYKAGDFGTVKMGNTSYSKIV 286
Query: 241 GIGN--------------------------------------SEFGGNQWKLTKGSKLVT 276
GIG+ + G +WKL KG +V
Sbjct: 287 GIGDVCIKTNVGFTVMLKNVRHVPDLCFNLISTPVMDRAGYCNHLGNGRWKLAKGPMVVA 346
BLAST of Moc08g37020 vs. ExPASy TrEMBL
Match:
A0A803NDX7 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)
HSP 1 Score: 150.6 bits (379), Expect = 1.2e-32
Identity = 97/250 (38.80%), Postives = 142/250 (56.80%), Query Frame = 0
Query: 1 MKDEDWVETNEQAVAFIRLCM--NVASLVVNETTAIYLMKALENRYKKPLANNKVYLVRR 60
M++ +W + QA+ IRL + NVA + ETT LMKAL N Y+KP A+NKV+L+RR
Sbjct: 1 MQEAEWKLLDRQALGVIRLTLSRNVAFNIAKETTTAGLMKALSNMYEKPSASNKVHLMRR 60
Query: 61 FFNIQMEENTSVNSHINEITKLINQLASVKITFSDEVNAIQLLTSLPKSWETMKTAVSNS 120
F+++M E SV H+NE+ + QL+SV+I F DEV A+ LL+SLP SW TAVS+S
Sbjct: 61 LFSLRMSEGGSVAQHLNELNSVTTQLSSVEIKFDDEVLALILLSSLPDSWNATVTAVSSS 120
Query: 121 LEDKSLKFSEICDAAIAEKIRREESGKESTSVQKLSIGCRKRYMAESNAVV----DDTLV 180
+ LKF ++CD ++E+IRR ESG ++ G K AE+N DDTL+
Sbjct: 121 SGNNKLKFDDVCDLVLSEEIRRRESGTIKNQCKRTPKG--KEVKAEANVTSTGEGDDTLI 180
Query: 181 SVASNTETENQSSEWLIDSSASVHISSNRRLFTSFRRGNHSHVRMWNGRLSKTKGIGN-- 240
E++ W++DS AS H +SN+ F + N V + + + G N
Sbjct: 181 -----CSLESKEESWVLDSGASFHATSNKNFFEKYVHRNLGQVYLGDDQPCDIVGQSNVK 240
Query: 241 SEFGGNQWKL 243
+ G+ W+L
Sbjct: 241 IKLNGSAWEL 243
BLAST of Moc08g37020 vs. ExPASy TrEMBL
Match:
A0A438HDD3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_926 PE=4 SV=1)
HSP 1 Score: 149.8 bits (377), Expect = 2.0e-32
Identity = 117/371 (31.54%), Postives = 189/371 (50.94%), Query Frame = 0
Query: 1 MKDEDWVETNEQAVAFIRLCM--NVASLVVNETTAIYLMKALENRYKKPLANNKVYLVRR 60
MK E+W + Q + IRL + +VA VV E T LMKAL Y+KP ANNKV+L+++
Sbjct: 47 MKAEEWALLDRQVLGVIRLTLSRSVAHNVVKEKTTADLMKALSGMYEKPSANNKVHLMKK 106
Query: 61 FFNIQMEENTSVNSHINEITKLINQLASVKITFSDEVNAIQLLTSLPKSWETMKTAVSNS 120
FN++M EN SV H+NE + NQL+SV+I F DE+ A+ +L SLP SWE M+ AVSNS
Sbjct: 107 LFNLKMAENASVAQHLNEFNTITNQLSSVEIDFDDEIRALIVLASLPNSWEAMRMAVSNS 166
Query: 121 LEDKSLKFSEICDAAIAEKIRREESGKESTSVQKLSIGCR--------------KRYMAE 180
+ LK+++I D +AE+IRR ++G+ S S L++ R K
Sbjct: 167 TGKEKLKYNDIRDLILAEEIRRRDAGETSGSGSALNLETRGRGHFKRQCKSPKKKNEDDS 226
Query: 181 SNAVVDDTLVSVASNTETENQSSEWLIDSSASVHISSNRRLFTSFRRGNHSHVRMWNGRL 240
+NAV ++ V A ++ +W++DS AS H + +R + ++ G+ V + +G
Sbjct: 227 ANAVTEE--VQDALLLAVDSPLDDWVLDSRASFHTTPHREIIQNYVAGDFGKVYLADGSA 286
Query: 241 SKTKGIGNSEF---GGNQWKLTKGSKLVTIGHRRSTVYTSQLSVARGSLKQWMQVAD--- 300
G+G+ G+ W L K + + RR+ + QL G ++ VAD
Sbjct: 287 LDVVGLGDVRISLPNGSIWLLEKVRHIPDL--RRNLISVGQLD-DEGHAILFVGVADAST 346
Query: 301 ---------GVQRREALKIFSRRLEVVAIEALKFSKIIKDYCCSGKQDRCFVSKWEIVGI 341
G + +K+ + ++ ++++ F + + C GKQ + KW+ +
Sbjct: 347 DTSLWHRRLGHMSEKGMKMLLSKGKLPELKSIDFD--MCESCILGKQKK----KWKAMVE 406
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RVW60263.1 | 2.9e-33 | 37.69 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
RVW82472.1 | 4.2e-32 | 31.54 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
RVW34240.1 | 5.5e-32 | 36.16 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
RVX07359.1 | 7.2e-32 | 36.19 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
RVW73393.1 | 7.2e-32 | 35.82 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 8.0e-18 | 24.70 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
A0A438FJS0 | 1.4e-33 | 37.69 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A0A2N9GH12 | 1.8e-33 | 34.36 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29668 PE=4 SV=1 | [more] |
A0A2N9GZ72 | 2.4e-33 | 32.02 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35439 PE=4 SV=1 | [more] |
A0A803NDX7 | 1.2e-32 | 38.80 | Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | [more] |
A0A438HDD3 | 2.0e-32 | 31.54 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
Match Name | E-value | Identity | Description | |