Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGAAGGATTAGATACAACTTATAAGGTATGGAAATCTTTGGAAGAGACTCCCCTAGCCATTACCAAAGAAAATGAAATTCATATCAGTGAAGTTCTACACTATTTGAGGAAGGGGAATCTATCACTTGATGAATACATCAAGAAATTCAAATCCTTGAGTGACAAGCTTGCTGCCATGAAGAAACCATTGGATGATTTAAGCAAGGTATTCACTCTAGCTCGTGGCTTGGGCAATCAATATAAAGAATTTCGGATTGCTATGTTGTCAAAGACTCCATTTCCAACATTCAACCAATTTATCTTAGCACTAAAAGCTCATAGCAACTACATGTCCATGAAATAAAAGAAGAAAAGATCTCTCCTCCTGAAGCAAATCAAGCCTATTACAGTCAAAAGGGAAGAGGCAGAAGTAGAGGAGGATATTACAACCCAAGAGGAACGGGAAGAGGAATTCATTTCAACACCAGACAAAATGCTCAAAACCAAAATCCATCCAACTTTGCTGCTTCTAAATCAAATATTTACTCTCCCACTCAAGGATCAAATCAAGGTAACAATATACAATGTCAAATCTGTGGAAAGACTAACCACTCGGCTTTGAAATGTTGGAATAGATTTGATCATGCATATCAATCTGAAGAAATTACAAAAGCACTAGCAGCGTTGACATTTTAAGATGGAATGGACTCAAATATGTATGCTGACTCTGGTGCCACCTCTTACGTTGTCAATGATTTAGGTAAAGTTTCTAAAACTCAGAGATATATAGGGAGGAAAAACTATATGTTGGTAATGGAAATGGATTAAATATTACTCACATTGTCATGGAAAACTAAAATCTAGCCATGGTGATTTAGAATTCAATAATGTGTTAGTTGTTGATAAGTCTTGAATTTTAGGAAAAAGTGTTTACAAATTGTGCATGTTTAGTGTCTTCTGAAATTAAATACGTGTGTTTCATGCATTGAATCCGGTATAAATGGGACTATTTCTTAGAAAAGACTTGTACACTTGGTTTTGGATAGATAGATGGAATTATGAGGAAATATATATGTTTTATAGGGGAAAAAGGAAGGAAAAAGTAGCAATGCACCTGCTACATATGACACAGAGGCCATCTTAAAGCTAGCAGCGATGCGTCTGGCGCATCGCCAACACTCCAGAAACTTCAACAATGCGCTTGGCGCATTCTCCACCTACAAATAA
mRNA sequence
ATGATCGAAGGATTAGATACAACTTATAAGGTATGGAAATCTTTGGAAGAGACTCCCCTAGCCATTACCAAAGAAAATGAAATTCATATCAGTGAAGTTCTACACTATTTGAGGAAGGGGAATCTATCACTTGATGAATACATCAAGAAATTCAAATCCTTGAGTGACAAGCTTGCTGCCATGAAGAAACCATTGGATGATTTAAGCAAGGGGAAAAAGGAAGGAAAAAGTAGCAATGCACCTGCTACATATGACACAGAGGCCATCTTAAAGCTAGCAGCGATGCGTCTGGCGCATCGCCAACACTCCAGAAACTTCAACAATGCGCTTGGCGCATTCTCCACCTACAAATAA
Coding sequence (CDS)
ATGATCGAAGGATTAGATACAACTTATAAGGTATGGAAATCTTTGGAAGAGACTCCCCTAGCCATTACCAAAGAAAATGAAATTCATATCAGTGAAGTTCTACACTATTTGAGGAAGGGGAATCTATCACTTGATGAATACATCAAGAAATTCAAATCCTTGAGTGACAAGCTTGCTGCCATGAAGAAACCATTGGATGATTTAAGCAAGGGGAAAAAGGAAGGAAAAAGTAGCAATGCACCTGCTACATATGACACAGAGGCCATCTTAAAGCTAGCAGCGATGCGTCTGGCGCATCGCCAACACTCCAGAAACTTCAACAATGCGCTTGGCGCATTCTCCACCTACAAATAA
Protein sequence
MIEGLDTTYKVWKSLEETPLAITKENEIHISEVLHYLRKGNLSLDEYIKKFKSLSDKLAAMKKPLDDLSKGKKEGKSSNAPATYDTEAILKLAAMRLAHRQHSRNFNNALGAFSTYK
Homology
BLAST of Moc07g20320 vs. NCBI nr
Match:
XP_022154021.1 (uncharacterized protein LOC111021379 [Momordica charantia] >XP_022154022.1 uncharacterized protein LOC111021379 [Momordica charantia])
HSP 1 Score: 92.8 bits (229), Expect = 2.1e-15
Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = 0
Query: 1 MIEGLDTTYKVWKSLEETPLAITKENEIHISEVLHYLRKGNLSLDEYIKKFKSLSDKLAA 60
++EG +T +VW SLEE L +TKENEIH++E L L+KG+LS+DEYI+KFK+L D+L A
Sbjct: 97 LLEGTETAKEVWHSLEELLLTMTKENEIHLNEALLTLKKGSLSMDEYIRKFKNLCDRLXA 156
Query: 61 MKKPLDDLSK 71
MKKPLDDL+K
Sbjct: 157 MKKPLDDLTK 166
BLAST of Moc07g20320 vs. NCBI nr
Match:
KAA0051410.1 (putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa])
HSP 1 Score: 92.8 bits (229), Expect = 2.1e-15
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 0
Query: 1 MIEGLDTTYKVWKSLEETPLAITKENEIHISEVLHYLRKGNLSLDEYIKKFKSLSDKLAA 60
M+EGL+ ++VW SLEE L+ITKENEIHISE LH L+KG L L+EYIK F LS+KLA
Sbjct: 1 MLEGLENAHQVWNSLEEILLSITKENEIHISESLHALKKGLLILEEYIKCFMVLSEKLAV 60
Query: 61 MKKPLDDLS 70
MKKPLDDL+
Sbjct: 61 MKKPLDDLT 69
BLAST of Moc07g20320 vs. NCBI nr
Match:
RVX03989.1 (hypothetical protein CK203_021715 [Vitis vinifera])
HSP 1 Score: 74.7 bits (182), Expect = 5.9e-10
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 0
Query: 1 MIEGLDTTYKVWKSLEETPLAITKENEIHISEVLHYLRKGNLSLDEYIKKFKSLSDKLAA 60
+++G T+Y VW SLEE L +TKE E+ ++ L L+KG SLDEY+++FK + D LAA
Sbjct: 38 LLDGTKTSYDVWNSLEEKLLPMTKEKEVQLTNKLQGLKKGTRSLDEYLREFKGICDALAA 97
Query: 61 MKKPLDDLSK 71
++KP+ DL K
Sbjct: 98 VRKPVSDLDK 107
BLAST of Moc07g20320 vs. NCBI nr
Match:
CAN74381.1 (hypothetical protein VITISV_007944 [Vitis vinifera])
HSP 1 Score: 71.2 bits (173), Expect = 6.5e-09
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 0
Query: 1 MIEGLDTTYKVWKSLEETPLAITKENEIHISEVLHYLRKGNLSLDEYIKKFKSLSDKLAA 60
+++G +T Y VW SL E L +TKE E+ ++ L ++KG SLDEY+++FK + D LAA
Sbjct: 97 LLDGTETAYDVWNSLGEKLLPMTKEKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAA 156
Query: 61 MKKPLDDLSK 71
++KP+ DL K
Sbjct: 157 VRKPVSDLDK 166
BLAST of Moc07g20320 vs. NCBI nr
Match:
RVW43526.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 71.2 bits (173), Expect = 6.5e-09
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 0
Query: 1 MIEGLDTTYKVWKSLEETPLAITKENEIHISEVLHYLRKGNLSLDEYIKKFKSLSDKLAA 60
+++G +T Y VW SL E L +TKE E+ ++ L ++KG SLDEY+++FK + D LAA
Sbjct: 142 LLDGTETAYDVWNSLGEKLLPMTKEKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAA 201
Query: 61 MKKPLDDLSK 71
++KP+ DL K
Sbjct: 202 VRKPVSDLDK 211
BLAST of Moc07g20320 vs. ExPASy TrEMBL
Match:
A0A6J1DMG5 (uncharacterized protein LOC111021379 OS=Momordica charantia OX=3673 GN=LOC111021379 PE=4 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 1.0e-15
Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = 0
Query: 1 MIEGLDTTYKVWKSLEETPLAITKENEIHISEVLHYLRKGNLSLDEYIKKFKSLSDKLAA 60
++EG +T +VW SLEE L +TKENEIH++E L L+KG+LS+DEYI+KFK+L D+L A
Sbjct: 97 LLEGTETAKEVWHSLEELLLTMTKENEIHLNEALLTLKKGSLSMDEYIRKFKNLCDRLXA 156
Query: 61 MKKPLDDLSK 71
MKKPLDDL+K
Sbjct: 157 MKKPLDDLTK 166
BLAST of Moc07g20320 vs. ExPASy TrEMBL
Match:
A0A5A7U8B5 (Putative leucine-rich repeat receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G001530 PE=4 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 1.0e-15
Identity = 47/69 (68.12%), Postives = 56/69 (81.16%), Query Frame = 0
Query: 1 MIEGLDTTYKVWKSLEETPLAITKENEIHISEVLHYLRKGNLSLDEYIKKFKSLSDKLAA 60
M+EGL+ ++VW SLEE L+ITKENEIHISE LH L+KG L L+EYIK F LS+KLA
Sbjct: 1 MLEGLENAHQVWNSLEEILLSITKENEIHISESLHALKKGLLILEEYIKCFMVLSEKLAV 60
Query: 61 MKKPLDDLS 70
MKKPLDDL+
Sbjct: 61 MKKPLDDLT 69
BLAST of Moc07g20320 vs. ExPASy TrEMBL
Match:
A0A438J4W0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_021715 PE=4 SV=1)
HSP 1 Score: 74.7 bits (182), Expect = 2.8e-10
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 0
Query: 1 MIEGLDTTYKVWKSLEETPLAITKENEIHISEVLHYLRKGNLSLDEYIKKFKSLSDKLAA 60
+++G T+Y VW SLEE L +TKE E+ ++ L L+KG SLDEY+++FK + D LAA
Sbjct: 38 LLDGTKTSYDVWNSLEEKLLPMTKEKEVQLTNKLQGLKKGTRSLDEYLREFKGICDALAA 97
Query: 61 MKKPLDDLSK 71
++KP+ DL K
Sbjct: 98 VRKPVSDLDK 107
BLAST of Moc07g20320 vs. ExPASy TrEMBL
Match:
A0A2K3PNP5 (Copia-like polyprotein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g013628 PE=4 SV=1)
HSP 1 Score: 71.2 bits (173), Expect = 3.1e-09
Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 0
Query: 1 MIEGLDTTYKVWKSLEETPLAITKENEIHISEVLHYLRKGNLSLDEYIKKFKSLSDKLAA 60
MI G DT Y +W SL E L T++ E + L+ L KGNLSLDEYI+KFK L +KL+A
Sbjct: 915 MILGGDTAYYIWSSLHEQLLPNTEDGEAQLKNSLYALSKGNLSLDEYIRKFKELCNKLSA 974
Query: 61 MKKPLDDLSK 71
+ KP+ D+ K
Sbjct: 975 IGKPVSDVDK 984
BLAST of Moc07g20320 vs. ExPASy TrEMBL
Match:
A5AU03 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_013750 PE=3 SV=1)
HSP 1 Score: 71.2 bits (173), Expect = 3.1e-09
Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = 0
Query: 1 MIEGLDTTYKVWKSLEETPLAITKENEIHISEVLHYLRKGNLSLDEYIKKFKSLSDKLAA 60
+++G +T Y VW SL E L +TKE E+ ++ L ++KG SLDEY+++FK + D LAA
Sbjct: 523 LLDGTETAYDVWNSLGEKLLPMTKEKEVQLTNRLRGVKKGTRSLDEYLREFKGICDALAA 582
Query: 61 MKKPLDDLSK 71
++KP+ DL K
Sbjct: 583 VRKPVSDLDK 592
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022154021.1 | 2.1e-15 | 62.86 | uncharacterized protein LOC111021379 [Momordica charantia] >XP_022154022.1 uncha... | [more] |
KAA0051410.1 | 2.1e-15 | 68.12 | putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. mak... | [more] |
RVX03989.1 | 5.9e-10 | 48.57 | hypothetical protein CK203_021715 [Vitis vinifera] | [more] |
CAN74381.1 | 6.5e-09 | 45.71 | hypothetical protein VITISV_007944 [Vitis vinifera] | [more] |
RVW43526.1 | 6.5e-09 | 45.71 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DMG5 | 1.0e-15 | 62.86 | uncharacterized protein LOC111021379 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
A0A5A7U8B5 | 1.0e-15 | 68.12 | Putative leucine-rich repeat receptor-like protein kinase OS=Cucumis melo var. m... | [more] |
A0A438J4W0 | 2.8e-10 | 48.57 | Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_021715 PE=4 SV=1 | [more] |
A0A2K3PNP5 | 3.1e-09 | 51.43 | Copia-like polyprotein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g013628... | [more] |
A5AU03 | 3.1e-09 | 45.71 | Reverse transcriptase Ty1/copia-type domain-containing protein OS=Vitis vinifera... | [more] |
Match Name | E-value | Identity | Description | |