Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGAATGCTTCCTGGAGTAGAGTGTGCTAGAAGAAGACGGTGTCATCAGAACAAAGTATGGTCCGATTCACCAGCGATCGCCGCTCAGGCCCTAACCAGGAGATCCGTTCTCTGCTTGTACACAAGCAACCACGAAACCCTACTCGCTTCAAATCCATCTCTGGTTCGTAAATCGCACCTCGCTCTATCGATGAATTCGAAATTTGTTCACTAGATTCGAACAAAATTGATTCAGTTTTTACTTTAAAATTCTCCAGAAGAGAAGCCTGTTAGCCGCGGTAGACGAAGACGATAAATTGGACGAAATTGCGAGAGAGGCGAAGAGGAGGTTGGACGAGCGATTGAGAACGCAGAGGAAATCAGAGGTCGAAATTGGAAGGTACTAAAACGACGCCGTTTAGAACAACACGCGACGAATTTTGCATTTCCGTAAAATATTGCTTTGTTTCTCATAGTTACAAATAATTAAAGGCCATACCATTTTATTTTTTGTTTTATTTTTTTGAAATTAAATTTGTAAATACTAGTTTTACATTTGATTATCTTCTACTTAATTTAGTTTTCAAAAATTAGTTGTTACTTAATCTAGACGTTTTTAGCAAAGATGAAAATATACCAAAACTGGGATAACTCAATTTAAATCTCTTTTCGAACACGTTGTACTAAAAGAAGTGAAAATATGTCGAAGAAATAGTGAGCAGAACATTATTTAAAAAAACATTAAATTAAAAACACAGTCTAAATATTTCGCGATTGGACGCAGTTGCAGAGGGGGAAAGTTCAAGTGGAGCAAGTTGAATTGGACAAAAAGTATGGTGAGTGCTGGTGAGACGCCTTGA
mRNA sequence
ATGGCCGGAATGCTTCCTGGAGTAGAGTGTGCTAGAAGAAGACGGTGTCATCAGAACAAAGTATGGTCCGATTCACCAGCGATCGCCGCTCAGGCCCTAACCAGGAGATCCGTTCTCTGCTTGTACACAAGCAACCACGAAACCCTACTCGCTTCAAATCCATCTCTGAAGAGAAGCCTGTTAGCCGCGGTAGACGAAGACGATAAATTGGACGAAATTGCGAGAGAGGCGAAGAGGAGGTTGGACGAGCGATTGAGAACGCAGAGGAAATCAGAGGTCGAAATTGGAAGTTGCAGAGGGGGAAAGTTCAAGTGGAGCAAGTTGAATTGGACAAAAAGTATGGTGAGTGCTGGTGAGACGCCTTGA
Coding sequence (CDS)
ATGGCCGGAATGCTTCCTGGAGTAGAGTGTGCTAGAAGAAGACGGTGTCATCAGAACAAAGTATGGTCCGATTCACCAGCGATCGCCGCTCAGGCCCTAACCAGGAGATCCGTTCTCTGCTTGTACACAAGCAACCACGAAACCCTACTCGCTTCAAATCCATCTCTGAAGAGAAGCCTGTTAGCCGCGGTAGACGAAGACGATAAATTGGACGAAATTGCGAGAGAGGCGAAGAGGAGGTTGGACGAGCGATTGAGAACGCAGAGGAAATCAGAGGTCGAAATTGGAAGTTGCAGAGGGGGAAAGTTCAAGTGGAGCAAGTTGAATTGGACAAAAAGTATGGTGAGTGCTGGTGAGACGCCTTGA
Protein sequence
MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSLLAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWTKSMVSAGETP
Homology
BLAST of Moc06g06220 vs. NCBI nr
Match:
XP_022134633.1 (uncharacterized protein LOC111006855 [Momordica charantia])
HSP 1 Score: 242.7 bits (618), Expect = 1.7e-60
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
Query: 1 MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL 60
MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL
Sbjct: 1 MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL 60
Query: 61 LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWTKSMVSAGET 120
LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWTKSMVSAGET
Sbjct: 61 LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWTKSMVSAGET 120
Query: 121 P 122
P
Sbjct: 121 P 121
BLAST of Moc06g06220 vs. NCBI nr
Match:
XP_022921934.1 (uncharacterized protein LOC111430042 isoform X1 [Cucurbita moschata])
HSP 1 Score: 179.1 bits (453), Expect = 2.3e-41
Identity = 93/112 (83.04%), Postives = 95/112 (84.82%), Query Frame = 0
Query: 1 MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL 60
MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHETLLASNPSL+RSL
Sbjct: 1 MAGMLPGVECARRRRCHQNKVWSDSPHIAAQALTRRSVLCLYTSNHETLLASNPSLERSL 60
Query: 61 LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWTK 113
L DEDDKLD AREAKRRLDERLRTQRKS KF W+KLNWTK
Sbjct: 61 LIEADEDDKLDGSAREAKRRLDERLRTQRKSR---------KFNWTKLNWTK 103
BLAST of Moc06g06220 vs. NCBI nr
Match:
XP_023515554.1 (uncharacterized protein LOC111779678 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 177.2 bits (448), Expect = 8.7e-41
Identity = 91/111 (81.98%), Postives = 94/111 (84.68%), Query Frame = 0
Query: 1 MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL 60
MAGMLPGVECARRRRCHQNKVWSDSP +AAQALTRRSVLCLYTSNHETLLASNPSL+RSL
Sbjct: 1 MAGMLPGVECARRRRCHQNKVWSDSPHVAAQALTRRSVLCLYTSNHETLLASNPSLERSL 60
Query: 61 LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWT 112
L DEDDKLD AREAKRRLDERLRTQRKS KF W+KLNWT
Sbjct: 61 LVEADEDDKLDGSAREAKRRLDERLRTQRKSR---------KFNWTKLNWT 102
BLAST of Moc06g06220 vs. NCBI nr
Match:
KAG6589799.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 176.4 bits (446), Expect = 1.5e-40
Identity = 92/112 (82.14%), Postives = 94/112 (83.93%), Query Frame = 0
Query: 1 MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL 60
MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHET LASNPSL+RSL
Sbjct: 1 MAGMLPGVECARRRRCHQNKVWSDSPHIAAQALTRRSVLCLYTSNHETHLASNPSLERSL 60
Query: 61 LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWTK 113
L DEDDKLD AREAKRRLDERLRTQRKS KF W+KLNWTK
Sbjct: 61 LIEADEDDKLDGSAREAKRRLDERLRTQRKSR---------KFNWTKLNWTK 103
BLAST of Moc06g06220 vs. NCBI nr
Match:
KAG7023470.1 (hypothetical protein SDJN02_14495 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 176.4 bits (446), Expect = 1.5e-40
Identity = 92/112 (82.14%), Postives = 94/112 (83.93%), Query Frame = 0
Query: 1 MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL 60
MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHET LASNPSL+RSL
Sbjct: 1 MAGMLPGVECARRRRCHQNKVWSDSPHIAAQALTRRSVLCLYTSNHETHLASNPSLERSL 60
Query: 61 LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWTK 113
L DEDDKLD AREAKRRLDERLRTQRKS KF W+KLNWTK
Sbjct: 61 LIEADEDDKLDGSAREAKRRLDERLRTQRKSR---------KFNWTKLNWTK 103
BLAST of Moc06g06220 vs. ExPASy TrEMBL
Match:
A0A6J1C2J4 (uncharacterized protein LOC111006855 OS=Momordica charantia OX=3673 GN=LOC111006855 PE=4 SV=1)
HSP 1 Score: 242.7 bits (618), Expect = 8.1e-61
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
Query: 1 MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL 60
MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL
Sbjct: 1 MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL 60
Query: 61 LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWTKSMVSAGET 120
LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWTKSMVSAGET
Sbjct: 61 LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWTKSMVSAGET 120
Query: 121 P 122
P
Sbjct: 121 P 121
BLAST of Moc06g06220 vs. ExPASy TrEMBL
Match:
A0A6J1E1Y4 (uncharacterized protein LOC111430042 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430042 PE=4 SV=1)
HSP 1 Score: 179.1 bits (453), Expect = 1.1e-41
Identity = 93/112 (83.04%), Postives = 95/112 (84.82%), Query Frame = 0
Query: 1 MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL 60
MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHETLLASNPSL+RSL
Sbjct: 1 MAGMLPGVECARRRRCHQNKVWSDSPHIAAQALTRRSVLCLYTSNHETLLASNPSLERSL 60
Query: 61 LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWTK 113
L DEDDKLD AREAKRRLDERLRTQRKS KF W+KLNWTK
Sbjct: 61 LIEADEDDKLDGSAREAKRRLDERLRTQRKSR---------KFNWTKLNWTK 103
BLAST of Moc06g06220 vs. ExPASy TrEMBL
Match:
A0A6J1E765 (uncharacterized protein LOC111430042 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430042 PE=4 SV=1)
HSP 1 Score: 174.9 bits (442), Expect = 2.1e-40
Identity = 91/111 (81.98%), Postives = 93/111 (83.78%), Query Frame = 0
Query: 1 MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL 60
MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHETLLASNPSL+RSL
Sbjct: 1 MAGMLPGVECARRRRCHQNKVWSDSPHIAAQALTRRSVLCLYTSNHETLLASNPSLERSL 60
Query: 61 LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWT 112
L DEDDKLD AREAKRRLDERLRTQRKS K W+KLNWT
Sbjct: 61 LIEADEDDKLDGSAREAKRRLDERLRTQRKSR---------KLNWTKLNWT 102
BLAST of Moc06g06220 vs. ExPASy TrEMBL
Match:
A0A6J1JME7 (uncharacterized protein LOC111485711 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485711 PE=4 SV=1)
HSP 1 Score: 169.9 bits (429), Expect = 6.7e-39
Identity = 89/111 (80.18%), Postives = 91/111 (81.98%), Query Frame = 0
Query: 1 MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL 60
MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHETLLASNPSL+RSL
Sbjct: 1 MAGMLPGVECARRRRCHQNKVWSDSPHIAAQALTRRSVLCLYTSNHETLLASNPSLERSL 60
Query: 61 LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWT 112
L DEDDKL AREAKRRLDERLRTQ KS KF W+K NWT
Sbjct: 61 LIEADEDDKLVGSAREAKRRLDERLRTQMKSR---------KFNWTKFNWT 102
BLAST of Moc06g06220 vs. ExPASy TrEMBL
Match:
A0A6J1JLN2 (uncharacterized protein LOC111485711 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485711 PE=4 SV=1)
HSP 1 Score: 159.5 bits (402), Expect = 9.1e-36
Identity = 82/94 (87.23%), Postives = 85/94 (90.43%), Query Frame = 0
Query: 1 MAGMLPGVECARRRRCHQNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNPSLKRSL 60
MAGMLPGVECARRRRCHQNKVWSDSP IAAQALTRRSVLCLYTSNHETLLASNPSL+RSL
Sbjct: 1 MAGMLPGVECARRRRCHQNKVWSDSPHIAAQALTRRSVLCLYTSNHETLLASNPSLERSL 60
Query: 61 LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVE 95
L DEDDKL AREAKRRLDERLRTQ KS ++
Sbjct: 61 LIEADEDDKLVGSAREAKRRLDERLRTQMKSRMK 94
BLAST of Moc06g06220 vs. TAIR 10
Match:
AT2G15580.2 (RING/U-box superfamily protein )
HSP 1 Score: 72.0 bits (175), Expect = 3.7e-13
Identity = 51/129 (39.53%), Postives = 68/129 (52.71%), Query Frame = 0
Query: 1 MAGMLPGVECARRRRCH------QNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNP 60
MAGMLPGVECARRRR H ++ + A A TRR LYT+NHE+ A
Sbjct: 1 MAGMLPGVECARRRRFHGGAPPIESSNTASVAAAAGHVWTRRPSFSLYTTNHESHQAHVS 60
Query: 61 SLKRSL---LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSKLNWT 120
+RS+ D D+KLD A+EAK+RL++RLR ++ G K +NW+
Sbjct: 61 FSERSVRNKSYGEDNDEKLDGAAKEAKQRLNKRLRIPPRTS------SGKMVKTKGINWS 120
BLAST of Moc06g06220 vs. TAIR 10
Match:
AT2G15580.1 (RING/U-box superfamily protein )
HSP 1 Score: 68.2 bits (165), Expect = 5.3e-12
Identity = 48/116 (41.38%), Postives = 65/116 (56.03%), Query Frame = 0
Query: 1 MAGMLPGVECARRRRCH------QNKVWSDSPAIAAQALTRRSVLCLYTSNHETLLASNP 60
MAGMLPGVECARRRR H ++ + A A TRR LYT+NHE+ A
Sbjct: 1 MAGMLPGVECARRRRFHGGAPPIESSNTASVAAAAGHVWTRRPSFSLYTTNHESHQAHVS 60
Query: 61 SLKRSL---LAAVDEDDKLDEIAREAKRRLDERLRTQRKSEVEIGSCRGGKFKWSK 108
+RS+ D D+KLD A+EAK+RL++RLR ++ + G +G K + K
Sbjct: 61 FSERSVRNKSYGEDNDEKLDGAAKEAKQRLNKRLRIPPRTR-QNGKDKGNKLEQGK 115
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022134633.1 | 1.7e-60 | 100.00 | uncharacterized protein LOC111006855 [Momordica charantia] | [more] |
| XP_022921934.1 | 2.3e-41 | 83.04 | uncharacterized protein LOC111430042 isoform X1 [Cucurbita moschata] | [more] |
| XP_023515554.1 | 8.7e-41 | 81.98 | uncharacterized protein LOC111779678 [Cucurbita pepo subsp. pepo] | [more] |
| KAG6589799.1 | 1.5e-40 | 82.14 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
| KAG7023470.1 | 1.5e-40 | 82.14 | hypothetical protein SDJN02_14495 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1C2J4 | 8.1e-61 | 100.00 | uncharacterized protein LOC111006855 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
| A0A6J1E1Y4 | 1.1e-41 | 83.04 | uncharacterized protein LOC111430042 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A6J1E765 | 2.1e-40 | 81.98 | uncharacterized protein LOC111430042 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
| A0A6J1JME7 | 6.7e-39 | 80.18 | uncharacterized protein LOC111485711 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
| A0A6J1JLN2 | 9.1e-36 | 87.23 | uncharacterized protein LOC111485711 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
