Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGAGCTGAAATAATGGTTGCTGGATCATGTGTGTTTGATGGGATGAGCATATCAATGGAAGATTTTTTGATCGAGAGAAGGCCTTATCATCGCAACTGTGGCTGCAAATTACACATCAAAAATGGCTCTTGCCCACATCCTCCTTTCAAAACTTCTTCTCTTTCGTTTATGAGAAACCAAAAATGGACCAAAACTACTTCTCTTCACATTCAATCTGCCTCCAAATTCTCCTCCCTTCCTTCTCCACTTCGACGCCCCGAACCAGATATTATTACTGACGAGCTCATGTGA
mRNA sequence
ATGGGAGGAGCTGAAATAATGGTTGCTGGATCATGTGTGTTTGATGGGATGAGCATATCAATGGAAGATTTTTTGATCGAGAGAAGGCCTTATCATCGCAACTGTGGCTGCAAATTACACATCAAAAATGGCTCTTGCCCACATCCTCCTTTCAAAACTTCTTCTCTTTCGTTTATGAGAAACCAAAAATGGACCAAAACTACTTCTCTTCACATTCAATCTGCCTCCAAATTCTCCTCCCTTCCTTCTCCACTTCGACGCCCCGAACCAGATATTATTACTGACGAGCTCATGTGA
Coding sequence (CDS)
ATGGGAGGAGCTGAAATAATGGTTGCTGGATCATGTGTGTTTGATGGGATGAGCATATCAATGGAAGATTTTTTGATCGAGAGAAGGCCTTATCATCGCAACTGTGGCTGCAAATTACACATCAAAAATGGCTCTTGCCCACATCCTCCTTTCAAAACTTCTTCTCTTTCGTTTATGAGAAACCAAAAATGGACCAAAACTACTTCTCTTCACATTCAATCTGCCTCCAAATTCTCCTCCCTTCCTTCTCCACTTCGACGCCCCGAACCAGATATTATTACTGACGAGCTCATGTGA
Protein sequence
MGGAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPSPLRRPEPDIITDELM
Homology
BLAST of Moc06g06190 vs. NCBI nr
Match:
KAG6587851.1 (hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 97.1 bits (240), Expect = 9.2e-17
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0
Query: 3 GAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLH--IKNGSCPHPPFKTSSLSFMR 62
G E+M G CVFDG SISM DFLIERRPYHRNCGC LH +KNG CPH SS+SF++
Sbjct: 2 GGEMM--GGCVFDG-SISMRDFLIERRPYHRNCGCALHHRLKNGGCPHA--LNSSVSFLK 61
Query: 63 NQKWTKTTSLHIQSASKFSSLPSP 85
+KWT T L IQ+ S+FS+ +P
Sbjct: 62 ARKWTDTCRLQIQAMSEFSAHAAP 80
BLAST of Moc06g06190 vs. NCBI nr
Match:
XP_023531633.1 (uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 95.5 bits (236), Expect = 2.7e-16
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 0
Query: 3 GAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLH--IKNGSCPHPPFKTSSLSFMR 62
G E+M G CVFDG SISM DFLIERRPYHRNCGC LH KNG CPH +S+SF++
Sbjct: 2 GGEVM--GGCVFDG-SISMHDFLIERRPYHRNCGCALHHRAKNGGCPHA--LNTSVSFLK 61
Query: 63 NQKWTKTTSLHIQSASKFSSLPSP 85
+KWT T L IQ+ S+FS+ +P
Sbjct: 62 ARKWTDTCRLQIQAMSEFSAHAAP 80
BLAST of Moc06g06190 vs. NCBI nr
Match:
XP_023531631.1 (uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 95.5 bits (236), Expect = 2.7e-16
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 0
Query: 3 GAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLH--IKNGSCPHPPFKTSSLSFMR 62
G E+M G CVFDG SISM DFLIERRPYHRNCGC LH KNG CPH +S+SF++
Sbjct: 2 GGEVM--GGCVFDG-SISMHDFLIERRPYHRNCGCALHHRAKNGGCPHA--LNTSVSFLK 61
Query: 63 NQKWTKTTSLHIQSASKFSSLPSP 85
+KWT T L IQ+ S+FS+ +P
Sbjct: 62 ARKWTDTCRLQIQAMSEFSAHAAP 80
BLAST of Moc06g06190 vs. NCBI nr
Match:
KAA0050036.1 (hypothetical protein E6C27_scaffold675G00110 [Cucumis melo var. makuwa] >TYK03640.1 hypothetical protein E5676_scaffold1369G00690 [Cucumis melo var. makuwa])
HSP 1 Score: 80.5 bits (197), Expect = 9.0e-12
Identity = 46/84 (54.76%), Postives = 58/84 (69.05%), Query Frame = 0
Query: 1 MGGAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLH---IKNG-SCPHPPFKTSSL 60
MGG V GSCVFDG S+SM+DFLIERRPYHRNCGC LH +NG +C H +S+
Sbjct: 61 MGG----VVGSCVFDG-SLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSV 120
Query: 61 SFMRNQKWTKTTSLHIQSASKFSS 81
SF++ QK T+ ++S+SK SS
Sbjct: 121 SFLKTQKCPITSLQILRSSSKVSS 139
BLAST of Moc06g06190 vs. NCBI nr
Match:
OMO52287.1 (hypothetical protein CCACVL1_29281 [Corchorus capsularis])
HSP 1 Score: 79.0 bits (193), Expect = 2.6e-11
Identity = 44/82 (53.66%), Postives = 52/82 (63.41%), Query Frame = 0
Query: 2 GGAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRN 61
G AE+M CVF+G SI M+D LIERRPYHRNCGC LH G+C F T +LSF +
Sbjct: 4 GAAEMMF--RCVFEG-SIVMQDTLIERRPYHRNCGCALHKLKGACSSTCFGTRNLSFPKK 63
Query: 62 QKWTKTTSLHIQSASKFSSLPS 84
KW + + SASKFSS S
Sbjct: 64 HKWNECSLSVSISASKFSSQSS 82
BLAST of Moc06g06190 vs. ExPASy TrEMBL
Match:
A0A5A7U781 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00690 PE=4 SV=1)
HSP 1 Score: 80.5 bits (197), Expect = 4.3e-12
Identity = 46/84 (54.76%), Postives = 58/84 (69.05%), Query Frame = 0
Query: 1 MGGAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLH---IKNG-SCPHPPFKTSSL 60
MGG V GSCVFDG S+SM+DFLIERRPYHRNCGC LH +NG +C H +S+
Sbjct: 61 MGG----VVGSCVFDG-SLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSV 120
Query: 61 SFMRNQKWTKTTSLHIQSASKFSS 81
SF++ QK T+ ++S+SK SS
Sbjct: 121 SFLKTQKCPITSLQILRSSSKVSS 139
BLAST of Moc06g06190 vs. ExPASy TrEMBL
Match:
A0A1R3G2J8 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29281 PE=4 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 1.3e-11
Identity = 44/82 (53.66%), Postives = 52/82 (63.41%), Query Frame = 0
Query: 2 GGAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRN 61
G AE+M CVF+G SI M+D LIERRPYHRNCGC LH G+C F T +LSF +
Sbjct: 4 GAAEMMF--RCVFEG-SIVMQDTLIERRPYHRNCGCALHKLKGACSSTCFGTRNLSFPKK 63
Query: 62 QKWTKTTSLHIQSASKFSSLPS 84
KW + + SASKFSS S
Sbjct: 64 HKWNECSLSVSISASKFSSQSS 82
BLAST of Moc06g06190 vs. ExPASy TrEMBL
Match:
A0A0A0LZ02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265640 PE=4 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 3.4e-09
Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 0
Query: 1 MGGAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLH---IKNG-SCPHPPFKTSSL 60
MGG GS VFDG S+S++ FLIERRPYHRNCGC LH I+NG +C H +S+
Sbjct: 4 MGG-----VGSRVFDG-SLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSV 63
Query: 61 SFMRNQKWTKTTSLHIQSASK-FSSLPSP 85
SF++ QK KT+ + S+S+ F + SP
Sbjct: 64 SFLKTQKCPKTSLQILPSSSRQFVNSESP 86
BLAST of Moc06g06190 vs. ExPASy TrEMBL
Match:
A0A2P5X4V6 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A06G055200v1 PE=4 SV=1)
HSP 1 Score: 70.5 bits (171), Expect = 4.5e-09
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 0
Query: 4 AEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPF-KTSSLSFMRNQ 63
AE+M+ CVF+G SISM+D LIERRPYHRNC C LH G C +T+++SF + Q
Sbjct: 3 AEMML--RCVFEG-SISMQDCLIERRPYHRNCQCALHNLKGVCLSTCISRTTNMSFPKKQ 62
Query: 64 KWTKTTSLHIQSASKFSSLPSPL 86
W +SL + SASKFSS PSPL
Sbjct: 63 TW-GDSSLSL-SASKFSS-PSPL 79
BLAST of Moc06g06190 vs. ExPASy TrEMBL
Match:
A0A5D2Q2E4 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A06G058900v1 PE=4 SV=1)
HSP 1 Score: 70.5 bits (171), Expect = 4.5e-09
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 0
Query: 4 AEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPF-KTSSLSFMRNQ 63
AE+M+ CVF+G SISM+D LIERRPYHRNC C LH G C +T+++SF + Q
Sbjct: 3 AEMML--RCVFEG-SISMQDCLIERRPYHRNCQCALHNLKGVCLSTCISRTTNMSFPKKQ 62
Query: 64 KWTKTTSLHIQSASKFSSLPSPL 86
W +SL + SASKFSS PSPL
Sbjct: 63 TW-GDSSLSL-SASKFSS-PSPL 79
BLAST of Moc06g06190 vs. TAIR 10
Match:
AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 47.0 bits (110), Expect = 1.0e-05
Identity = 33/89 (37.08%), Postives = 46/89 (51.69%), Query Frame = 0
Query: 7 MVAGSC------VFDGMSISMEDFLIERRPYHRNCGCKLHIKN---GS---CPHPPFKTS 66
M AGS +F+G IS D I+RRPYH+NCGC LH ++ GS C H +
Sbjct: 1 MAAGSMDGIFRNIFEG-CISSCDSSIQRRPYHKNCGCALHERSRGGGSATPCRHGRSEVV 60
Query: 67 SLSFMRNQKWTKTTSLHIQSASKFSSLPS 84
R+ + +LH+ S+S S+L S
Sbjct: 61 MFPIQRSWSEGNSLALHLASSSSSSNLQS 88
BLAST of Moc06g06190 vs. TAIR 10
Match:
AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 45.4 bits (106), Expect = 3.0e-05
Identity = 33/92 (35.87%), Postives = 46/92 (50.00%), Query Frame = 0
Query: 13 VFDGMSISMEDFLIERRPYHRNCGCKLHI------KNGSCPHPPF-----KTSSLSFMRN 72
+F+G IS D IERRPYH+NCGC LH KN + PP + S+SF
Sbjct: 10 IFEG-CISGLDSAIERRPYHKNCGCALHDKSSGAGKNQNQRRPPSCRRHGSSESISFPIR 69
Query: 73 QKWTK------------TTSLHIQSASKFSSL 82
+ W++ ++S ++QS S SSL
Sbjct: 70 RSWSEGNIMAMNLFSSSSSSSNLQSLSSSSSL 100
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6587851.1 | 9.2e-17 | 60.71 | hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023531633.1 | 2.7e-16 | 59.52 | uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
XP_023531631.1 | 2.7e-16 | 59.52 | uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
KAA0050036.1 | 9.0e-12 | 54.76 | hypothetical protein E6C27_scaffold675G00110 [Cucumis melo var. makuwa] >TYK0364... | [more] |
OMO52287.1 | 2.6e-11 | 53.66 | hypothetical protein CCACVL1_29281 [Corchorus capsularis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U781 | 4.3e-12 | 54.76 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1R3G2J8 | 1.3e-11 | 53.66 | Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29281 PE=4 ... | [more] |
A0A0A0LZ02 | 3.4e-09 | 49.44 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265640 PE=4 SV=1 | [more] |
A0A2P5X4V6 | 4.5e-09 | 55.42 | Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A06G055200v1 PE... | [more] |
A0A5D2Q2E4 | 4.5e-09 | 55.42 | Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A06G058900v1 P... | [more] |
Match Name | E-value | Identity | Description | |
AT5G35110.1 | 1.0e-05 | 37.08 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT2G46490.1 | 3.0e-05 | 35.87 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |