Moc06g06190 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc06g06190
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein isoform 1
Location	chr6: 4468449 .. 4468745 (+)
RNA-Seq Expression	Moc06g06190
Synteny	Moc06g06190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGGAGCTGAAATAATGGTTGCTGGATCATGTGTGTTTGATGGGATGAGCATATCAATGGAAGATTTTTTGATCGAGAGAAGGCCTTATCATCGCAACTGTGGCTGCAAATTACACATCAAAAATGGCTCTTGCCCACATCCTCCTTTCAAAACTTCTTCTCTTTCGTTTATGAGAAACCAAAAATGGACCAAAACTACTTCTCTTCACATTCAATCTGCCTCCAAATTCTCCTCCCTTCCTTCTCCACTTCGACGCCCCGAACCAGATATTATTACTGACGAGCTCATGTGA

mRNA sequence

ATGGGAGGAGCTGAAATAATGGTTGCTGGATCATGTGTGTTTGATGGGATGAGCATATCAATGGAAGATTTTTTGATCGAGAGAAGGCCTTATCATCGCAACTGTGGCTGCAAATTACACATCAAAAATGGCTCTTGCCCACATCCTCCTTTCAAAACTTCTTCTCTTTCGTTTATGAGAAACCAAAAATGGACCAAAACTACTTCTCTTCACATTCAATCTGCCTCCAAATTCTCCTCCCTTCCTTCTCCACTTCGACGCCCCGAACCAGATATTATTACTGACGAGCTCATGTGA

Coding sequence (CDS)

ATGGGAGGAGCTGAAATAATGGTTGCTGGATCATGTGTGTTTGATGGGATGAGCATATCAATGGAAGATTTTTTGATCGAGAGAAGGCCTTATCATCGCAACTGTGGCTGCAAATTACACATCAAAAATGGCTCTTGCCCACATCCTCCTTTCAAAACTTCTTCTCTTTCGTTTATGAGAAACCAAAAATGGACCAAAACTACTTCTCTTCACATTCAATCTGCCTCCAAATTCTCCTCCCTTCCTTCTCCACTTCGACGCCCCGAACCAGATATTATTACTGACGAGCTCATGTGA

Protein sequence

MGGAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRNQKWTKTTSLHIQSASKFSSLPSPLRRPEPDIITDELM

Homology

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BLAST of Moc06g06190 vs. NCBI nr
Match: KAG6587851.1 (hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.1 bits (240), Expect = 9.2e-17
Identity = 51/84 (60.71%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 3  GAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLH--IKNGSCPHPPFKTSSLSFMR 62
          G E+M  G CVFDG SISM DFLIERRPYHRNCGC LH  +KNG CPH     SS+SF++
Sbjct: 2  GGEMM--GGCVFDG-SISMRDFLIERRPYHRNCGCALHHRLKNGGCPHA--LNSSVSFLK 61

Query: 63 NQKWTKTTSLHIQSASKFSSLPSP 85
           +KWT T  L IQ+ S+FS+  +P
Sbjct: 62 ARKWTDTCRLQIQAMSEFSAHAAP 80

[Close]

BLAST of Moc06g06190 vs. NCBI nr
Match: XP_023531633.1 (uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.5 bits (236), Expect = 2.7e-16
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 3  GAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLH--IKNGSCPHPPFKTSSLSFMR 62
          G E+M  G CVFDG SISM DFLIERRPYHRNCGC LH   KNG CPH     +S+SF++
Sbjct: 2  GGEVM--GGCVFDG-SISMHDFLIERRPYHRNCGCALHHRAKNGGCPHA--LNTSVSFLK 61

Query: 63 NQKWTKTTSLHIQSASKFSSLPSP 85
           +KWT T  L IQ+ S+FS+  +P
Sbjct: 62 ARKWTDTCRLQIQAMSEFSAHAAP 80

[Close]

BLAST of Moc06g06190 vs. NCBI nr
Match: XP_023531631.1 (uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.5 bits (236), Expect = 2.7e-16
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 3  GAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLH--IKNGSCPHPPFKTSSLSFMR 62
          G E+M  G CVFDG SISM DFLIERRPYHRNCGC LH   KNG CPH     +S+SF++
Sbjct: 2  GGEVM--GGCVFDG-SISMHDFLIERRPYHRNCGCALHHRAKNGGCPHA--LNTSVSFLK 61

Query: 63 NQKWTKTTSLHIQSASKFSSLPSP 85
           +KWT T  L IQ+ S+FS+  +P
Sbjct: 62 ARKWTDTCRLQIQAMSEFSAHAAP 80

[Close]

BLAST of Moc06g06190 vs. NCBI nr
Match: KAA0050036.1 (hypothetical protein E6C27_scaffold675G00110 [Cucumis melo var. makuwa] >TYK03640.1 hypothetical protein E5676_scaffold1369G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 9.0e-12
Identity = 46/84 (54.76%), Postives = 58/84 (69.05%), Query Frame = 0


Query: 1   MGGAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLH---IKNG-SCPHPPFKTSSL 60
           MGG    V GSCVFDG S+SM+DFLIERRPYHRNCGC LH    +NG +C H     +S+
Sbjct: 61  MGG----VVGSCVFDG-SLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSV 120

Query: 61  SFMRNQKWTKTTSLHIQSASKFSS 81
           SF++ QK   T+   ++S+SK SS
Sbjct: 121 SFLKTQKCPITSLQILRSSSKVSS 139

[Close]

BLAST of Moc06g06190 vs. NCBI nr
Match: OMO52287.1 (hypothetical protein CCACVL1_29281 [Corchorus capsularis])

HSP 1 Score: 79.0 bits (193), Expect = 2.6e-11
Identity = 44/82 (53.66%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 2  GGAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRN 61
          G AE+M    CVF+G SI M+D LIERRPYHRNCGC LH   G+C    F T +LSF + 
Sbjct: 4  GAAEMMF--RCVFEG-SIVMQDTLIERRPYHRNCGCALHKLKGACSSTCFGTRNLSFPKK 63

Query: 62 QKWTKTTSLHIQSASKFSSLPS 84
           KW + +     SASKFSS  S
Sbjct: 64 HKWNECSLSVSISASKFSSQSS 82

[Close]

BLAST of Moc06g06190 vs. ExPASy TrEMBL
Match: A0A5A7U781 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00690 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 4.3e-12
Identity = 46/84 (54.76%), Postives = 58/84 (69.05%), Query Frame = 0


Query: 1   MGGAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLH---IKNG-SCPHPPFKTSSL 60
           MGG    V GSCVFDG S+SM+DFLIERRPYHRNCGC LH    +NG +C H     +S+
Sbjct: 61  MGG----VVGSCVFDG-SLSMQDFLIERRPYHRNCGCALHDDRFRNGAACSHAMKLKNSV 120

Query: 61  SFMRNQKWTKTTSLHIQSASKFSS 81
           SF++ QK   T+   ++S+SK SS
Sbjct: 121 SFLKTQKCPITSLQILRSSSKVSS 139

[Close]

BLAST of Moc06g06190 vs. ExPASy TrEMBL
Match: A0A1R3G2J8 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29281 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-11
Identity = 44/82 (53.66%), Postives = 52/82 (63.41%), Query Frame = 0


Query: 2  GGAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPFKTSSLSFMRN 61
          G AE+M    CVF+G SI M+D LIERRPYHRNCGC LH   G+C    F T +LSF + 
Sbjct: 4  GAAEMMF--RCVFEG-SIVMQDTLIERRPYHRNCGCALHKLKGACSSTCFGTRNLSFPKK 63

Query: 62 QKWTKTTSLHIQSASKFSSLPS 84
           KW + +     SASKFSS  S
Sbjct: 64 HKWNECSLSVSISASKFSSQSS 82

[Close]

BLAST of Moc06g06190 vs. ExPASy TrEMBL
Match: A0A0A0LZ02 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265640 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.4e-09
Identity = 44/89 (49.44%), Postives = 58/89 (65.17%), Query Frame = 0


Query: 1  MGGAEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLH---IKNG-SCPHPPFKTSSL 60
          MGG      GS VFDG S+S++ FLIERRPYHRNCGC LH   I+NG +C H     +S+
Sbjct: 4  MGG-----VGSRVFDG-SLSLQSFLIERRPYHRNCGCALHDDRIRNGAACSHALKSKNSV 63

Query: 61 SFMRNQKWTKTTSLHIQSASK-FSSLPSP 85
          SF++ QK  KT+   + S+S+ F +  SP
Sbjct: 64 SFLKTQKCPKTSLQILPSSSRQFVNSESP 86

[Close]

BLAST of Moc06g06190 vs. ExPASy TrEMBL
Match: A0A2P5X4V6 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A06G055200v1 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.5e-09
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 4  AEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPF-KTSSLSFMRNQ 63
          AE+M+   CVF+G SISM+D LIERRPYHRNC C LH   G C      +T+++SF + Q
Sbjct: 3  AEMML--RCVFEG-SISMQDCLIERRPYHRNCQCALHNLKGVCLSTCISRTTNMSFPKKQ 62

Query: 64 KWTKTTSLHIQSASKFSSLPSPL 86
           W   +SL + SASKFSS PSPL
Sbjct: 63 TW-GDSSLSL-SASKFSS-PSPL 79

[Close]

BLAST of Moc06g06190 vs. ExPASy TrEMBL
Match: A0A5D2Q2E4 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A06G058900v1 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.5e-09
Identity = 46/83 (55.42%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 4  AEIMVAGSCVFDGMSISMEDFLIERRPYHRNCGCKLHIKNGSCPHPPF-KTSSLSFMRNQ 63
          AE+M+   CVF+G SISM+D LIERRPYHRNC C LH   G C      +T+++SF + Q
Sbjct: 3  AEMML--RCVFEG-SISMQDCLIERRPYHRNCQCALHNLKGVCLSTCISRTTNMSFPKKQ 62

Query: 64 KWTKTTSLHIQSASKFSSLPSPL 86
           W   +SL + SASKFSS PSPL
Sbjct: 63 TW-GDSSLSL-SASKFSS-PSPL 79

[Close]

BLAST of Moc06g06190 vs. TAIR 10
Match: AT5G35110.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46490.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.0e-05
Identity = 33/89 (37.08%), Postives = 46/89 (51.69%), Query Frame = 0


Query: 7  MVAGSC------VFDGMSISMEDFLIERRPYHRNCGCKLHIKN---GS---CPHPPFKTS 66
          M AGS       +F+G  IS  D  I+RRPYH+NCGC LH ++   GS   C H   +  
Sbjct: 1  MAAGSMDGIFRNIFEG-CISSCDSSIQRRPYHKNCGCALHERSRGGGSATPCRHGRSEVV 60

Query: 67 SLSFMRNQKWTKTTSLHIQSASKFSSLPS 84
               R+     + +LH+ S+S  S+L S
Sbjct: 61 MFPIQRSWSEGNSLALHLASSSSSSNLQS 88

[Close]

BLAST of Moc06g06190 vs. TAIR 10
Match: AT2G46490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 3.0e-05
Identity = 33/92 (35.87%), Postives = 46/92 (50.00%), Query Frame = 0


Query: 13  VFDGMSISMEDFLIERRPYHRNCGCKLHI------KNGSCPHPPF-----KTSSLSFMRN 72
           +F+G  IS  D  IERRPYH+NCGC LH       KN +   PP       + S+SF   
Sbjct: 10  IFEG-CISGLDSAIERRPYHKNCGCALHDKSSGAGKNQNQRRPPSCRRHGSSESISFPIR 69

Query: 73  QKWTK------------TTSLHIQSASKFSSL 82
           + W++            ++S ++QS S  SSL
Sbjct: 70  RSWSEGNIMAMNLFSSSSSSSNLQSLSSSSSL 100

The following BLAST results are available for this feature:

BLAST of Moc06g06190 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587851.1	9.2e-17	60.71	hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023531633.1	2.7e-16	59.52	uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023531631.1	2.7e-16	59.52	uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAA0050036.1	9.0e-12	54.76	hypothetical protein E6C27_scaffold675G00110 [Cucumis melo var. makuwa] >TYK0364...	[more]
OMO52287.1	2.6e-11	53.66	hypothetical protein CCACVL1_29281 [Corchorus capsularis]	[more]

BLAST of Moc06g06190 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc06g06190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U781	4.3e-12	54.76	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1R3G2J8	1.3e-11	53.66	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_29281 PE=4 ...	[more]
A0A0A0LZ02	3.4e-09	49.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265640 PE=4 SV=1	[more]
A0A2P5X4V6	4.5e-09	55.42	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A06G055200v1 PE...	[more]
A0A5D2Q2E4	4.5e-09	55.42	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A06G058900v1 P...	[more]

BLAST of Moc06g06190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35110.1	1.0e-05	37.08	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G46490.1	3.0e-05	35.87	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..98
None	No IPR available	PANTHER	PTHR35121	HOMEODOMAIN PROTEIN 8, PUTATIVE-RELATED	coord: 2..82
None	No IPR available	PANTHER	PTHR35121:SF4	HOMEODOMAIN PROTEIN 8, PUTATIVE-RELATED	coord: 2..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc06g06190.1	Moc06g06190.1	mRNA