Moc04g01030 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc04g01030
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionCLAVATA3/ESR-RELATED 7
Locationchr4: 694201 .. 697099 (+)
RNA-Seq ExpressionMoc04g01030
SyntenyMoc04g01030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTTCTTCTGTTGTCCTCCGCCGTGTCGGAATCCCGGGTTCTCGGAGTGGAAAGGCCGATGCTCGTGGCACTCCAGCAGCTGCAAGAGAAGCTGCTGCTTCGGGGGAACAGCGGTGCAGCGTCGGCGGTGAAGGCTGTGGCGGCCGGAAAATCTTATGCGGCGTCGAAGCGGTCTAGCCCCGGTGGACCTGACCCGAGACACCATTGAGGAAATTTCACAGTGCAGCTTCTTCCAATCAGCTTTATCCATTTTCATTTACATGCAGAGAGACGACAATTATCGTTGCCGTTTTTAGTTAATTCCGTTGCTTTGTTTTTGTGTTAGTTGTGTGTGTCTTTGTTTTAATGAGTTTTACCTTTTTCTTTTTCCTTTGAGATTCCAACTTTTGAACTACTAGAAAAAGCTGTCTTATCCGCTTCAAATTAGTGCTAATTAATGAATTTTGTGGTAATTATCAATGAATCCTTAAGTCTGTTGGGATTTTCAAACACATTAAATGCTATATTTAATAGTCAACTTATCTGTTGTAATAAAAGAACATTACGACATTAAATAGATATAGATAATTTAACCAGTTAAATTATGTTAACGGACTAAATAATAATTTAAGACGACAAGGAGAAATTAATTAGCATAACAAACAAAATACATAAAACTTTTTTGAATTAATATAAAATCCGCTATCATATAAAAAAAATCTTATAGGGATATAATTGACGATAAATGGATCTAAAAATATAATTTATATGCATGAAGAAAAATAGTGATGAAATTAAAATTTTAAAAAAAATTAAACTAAATTGTAAAATTATCTAATTAGGGACTAAATACAAATTAACCCTACAAGCTTTTATTATTTACGATATTTTTGGATATGATTATTCATTATGGATTAAATACGATCAACGATGATAAAATATAAGGTAATCTAATTCATATATGAATATCTCAATACTCCTCCTATGAACTTGGAAAATTGCACAAGATCCAACAATGCAGGGTTATTTGAATATACAAGATCGATCTTCCAAAACCATGTTAAGGATGAATAGACTATTACTCAGTTCAAAAGTTTAATGGATTGAGTAAATTTCCTTTATTCACATGACACAAACAAAATGCAGACATGAGAAAATCATTTTTCTATGAATATGAAATCTACTGAACTAATACCACACGTCAATGAGCATACAAGTAAAGGTTAACTTGGTCAAAGCAACTACTAAATATTTCTTTGTCAGAGGTTCGAAATCTCCTACCCCTGTTGAGTTAAAAAAAAGAAAAAAAACTACTAATATCTTATCGACCTCTAATTGCAGTTCAAAACAACTCTATTTTTCTTAGTACAACAATACATAGAGTCGAGATTTTTTTAATCGAGAATATATATCTTAATTCGTTGAACTATGTCCAGATTGAGCAATTGAAAACTATATTAAATTAATACCGTCCATGACCATTTATAGGTAGATTTAAACTTTATGTTTTCAGGTTTTGGTTAATTTTGTGTCCAATTAACGACTCTTTGGAATATTTAAGGAAAGAGGGCCGCGCAATTGGTGTGGGAAAATGTGGCTTTTCGTGGGAAGGAATCTATAAGACTACATTATATAACAAAGAAAAATTAGCACAAAACATATTATATATATAATCCCATGTGCACATCTGATTCATTTTCTACATATAAATACCTCTATTTTATTATTTTAAATCAGAAAATTATTCACACATCAGAATCCTTGTCGTCCCCTCTACCTTTTTTTCTTTTAATCTTTTTTTTTTTTGCTTCTTTTTACTTATTCTCAAATACTAAATAATCCTCCGCGCTCTGCATACCTCTCAAAACATCTTGTAATAGTATGATATACTATTCGCCTTAAACTTAAATTTATGTGATTTTACTTTGAAGCATCAATAACTTGTCACCTTGTGACCAGCCTGAAGATCAGACAATGATCAACTCGATCGTAGAAAATAATAATGGAAGCGACATAAGTAATTAGTGGATTTGGATCACGGATATAAAGTTAGCATACCCAATAGAAATATGGTTCTAATTAAGTACTTATACAACTTATATGGTGTGATCTTTTCCATTTCTAATCAATTTGGATTATATTCGTATCAAAAAAATGTTTACAGGTTGCAATTTAATTTTAAGAGTAAATGGGACAGACCCACGTAAAATTACTCCCTAAATACCTCGATTCATGTTTAAAATATTGTTTCGACCCTATCGAATAATTTGTCAAGGGAGAAGAGAGAGGTGATTTAAGATGAAGCTACAAAGGATGATCTCTTACTTTTAGGATATTCTAAACAACTCTCACTCTTTGAAATCCAAAAGTTGGTGTCATCCCATGTTGTTCAAAACACAAAAGTGAGACCAAGAGACAAAAAAGAAACCCTAAGACAAATTTTCTGACTCACCATTTACACTCCCCACTACTACTCTAGCTCACTTCTTAATTCCCCAAAAAACTCAAAATTCATTTTCAAAACCCCTTCTATTCTCTCCTATAAATACCTCAAAAAACCCCACCTTTAATCACCAAACAACTTCCCACTTCTTCTTCACATGCAACTTATTTTCCTATTGAAATCAATCACATTATTTCCAATGGCCAGCCGTGGTTTTAACCCAAAACTTGCTCCATTGGTGGCAGTCCTTTTCATGCTCATGCTTGTCTCAGCCGTGGCCGGCCGCCATGCACCGCCGCCGCCACTGTCGGAGGCCACCCAAATCAGCAGCAGCATTATAATGCTGCGTAAATTGGGTTATAGCAAAACCCAAATGGAGCATTTTAGACGACTTTATTCAAATTCCATCGACAGATACACACCCGGAGGGCCTGATTCTCAGCACCATTCTCAGCCCCCTCGCCTTCCATAG

mRNA sequence

ATGTTGGTTCTTCTGTTGTCCTCCGCCGTGTCGGAATCCCGGGTTCTCGGAGTGGAAAGGCCGATGCTCGTGGCACTCCAGCAGCTGCAAGAGAAGCTGCTGCTTCGGGGGAACAGCGGTGCAGCGTCGGCGGTGAAGGCTGTGGCGGCCGGAAAATCTTATGCGGCGTCGAAGCGGTCTAGCCCCGCCGTGGCCGGCCGCCATGCACCGCCGCCGCCACTGTCGGAGGCCACCCAAATCAGCAGCAGCATTATAATGCTGCGTAAATTGGGTTATAGCAAAACCCAAATGGAGCATTTTAGACGACTTTATTCAAATTCCATCGACAGATACACACCCGGAGGGCCTGATTCTCAGCACCATTCTCAGCCCCCTCGCCTTCCATAG

Coding sequence (CDS)

ATGTTGGTTCTTCTGTTGTCCTCCGCCGTGTCGGAATCCCGGGTTCTCGGAGTGGAAAGGCCGATGCTCGTGGCACTCCAGCAGCTGCAAGAGAAGCTGCTGCTTCGGGGGAACAGCGGTGCAGCGTCGGCGGTGAAGGCTGTGGCGGCCGGAAAATCTTATGCGGCGTCGAAGCGGTCTAGCCCCGCCGTGGCCGGCCGCCATGCACCGCCGCCGCCACTGTCGGAGGCCACCCAAATCAGCAGCAGCATTATAATGCTGCGTAAATTGGGTTATAGCAAAACCCAAATGGAGCATTTTAGACGACTTTATTCAAATTCCATCGACAGATACACACCCGGAGGGCCTGATTCTCAGCACCATTCTCAGCCCCCTCGCCTTCCATAG

Protein sequence

MLVLLLSSAVSESRVLGVERPMLVALQQLQEKLLLRGNSGAASAVKAVAAGKSYAASKRSSPAVAGRHAPPPPLSEATQISSSIIMLRKLGYSKTQMEHFRRLYSNSIDRYTPGGPDSQHHSQPPRLP
Homology
[Close]
BLAST of Moc04g01030 vs. NCBI nr
Match: KAG6589262.1 (hypothetical protein SDJN03_17827, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 92.8 bits (229), Expect = 2.3e-15
Identity = 47/66 (71.21%), Postives = 54/66 (81.82%), Query Frame = 0 

Query: 64  VAGRHAPPP-PLSEATQISSSIIMLRKLGYSKTQMEHFRRLYSNSIDRYTPGGPDSQHHS 123
           VAGRHA PP    E T+ SSSI+++RK GYSKTQMEH +RL S+S +RYTPGGPDSQHHS
Sbjct: 26  VAGRHATPPWTTEEVTESSSSIMIMRKFGYSKTQMEHLKRL-SSSTERYTPGGPDSQHHS 85

Query: 124 QPPRLP 129
            PPRLP
Sbjct: 86  HPPRLP 90

[Close]
BLAST of Moc04g01030 vs. NCBI nr
Match: KAA0061638.1 (hypothetical protein E6C27_scaffold212G00060 [Cucumis melo var. makuwa] >TYK05869.1 hypothetical protein E5676_scaffold1465G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 3.4e-11
Identity = 44/70 (62.86%), Postives = 50/70 (71.43%), Query Frame = 0 

Query: 63  AVAGRHAPPPP--LSEATQ--ISSSIIMLRKLGYSKTQMEHFRRLYSNSIDRYTPGGPDS 122
           A A RHA   P  + EAT+   SS  +++RK GYSK QMEH RRL S+S  RY PGGPDS
Sbjct: 24  AAADRHATALPWTVEEATERISSSRNMIMRKFGYSKRQMEHLRRLSSSSTARYIPGGPDS 83

Query: 123 QHHSQPPRLP 129
           QHHSQPPRLP
Sbjct: 84  QHHSQPPRLP 93

[Close]
BLAST of Moc04g01030 vs. NCBI nr
Match: KAE8647339.1 (hypothetical protein Csa_003556, partial [Cucumis sativus])

HSP 1 Score: 73.2 bits (178), Expect = 1.9e-09
Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 0 

Query: 74  LSEATQ--ISSSIIMLRKLGYSKTQMEHFRRLYSNSIDRYTPGGPDSQHHSQPP 126
           + EAT+   SSS +++RK GYSK QMEH RRL S+S +RY PGGPDSQHHSQPP
Sbjct: 38  VEEATERISSSSNMVMRKFGYSKRQMEHLRRLSSSSTERYIPGGPDSQHHSQPP 91

[Close]
BLAST of Moc04g01030 vs. NCBI nr
Match: KAG6572409.1 (hypothetical protein SDJN03_29137, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.8 bits (177), Expect = 2.4e-09
Identity = 42/75 (56.00%), Postives = 50/75 (66.67%), Query Frame = 0 

Query: 63  AVAGRHAPPPPLSEATQI---------SSSIIMLRKLGYSKTQMEHFRRLYSNSIDRYTP 122
           A AGRHA P    EA  I         SSS +++R+LGY+K+QMEH RRL S+S  RY P
Sbjct: 27  AAAGRHALPLRTEEAAAIEGGGGSSSSSSSSMIMRRLGYTKSQMEHLRRL-SSSTARYIP 86

Query: 123 GGPDSQHHSQPPRLP 129
           GGPDSQHHS+ PR P
Sbjct: 87  GGPDSQHHSRSPRSP 100

[Close]
BLAST of Moc04g01030 vs. NCBI nr
Match: MBA0739247.1 (hypothetical protein [Gossypium gossypioides])

HSP 1 Score: 58.9 bits (141), Expect = 3.6e-05
Identity = 24/49 (48.98%), Postives = 38/49 (77.55%), Query Frame = 0 

Query: 82  SSIIMLRKLGYSKTQMEHFRRLYS--NSIDRYTPGGPDSQHHSQPPRLP 129
           SS ++LRKLGY + ++EH+R++++     DR +PGGPD +HH+ PPR+P
Sbjct: 30  SSRLLLRKLGYDRNKLEHYRQVFALKADSDRVSPGGPDHEHHAHPPRMP 78

[Close]
BLAST of Moc04g01030 vs. ExPASy Swiss-Prot
Match: Q8S8N1 (CLAVATA3/ESR (CLE)-related protein 7 OS=Arabidopsis thaliana OX=3702 GN=CLE7 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.2e-04
Identity = 21/53 (39.62%), Postives = 35/53 (66.04%), Query Frame = 0 

Query: 74  LSEATQISSSIIMLRKLGYSKTQMEHFRRLYS--NSIDRYTPGGPDSQHHSQP 125
           ++  T+   S  +L++LGY+ ++++   R  S  N +DR++PGGPD QHHS P
Sbjct: 27  VNSKTKDGESNDLLKRLGYNVSELKRIGRELSVQNEVDRFSPGGPDPQHHSYP 79

[Close]
BLAST of Moc04g01030 vs. ExPASy TrEMBL
Match: A0A0A0KGI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419510 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-11
Identity = 39/57 (68.42%), Postives = 46/57 (80.70%), Query Frame = 0 

Query: 74  LSEATQ--ISSSIIMLRKLGYSKTQMEHFRRLYSNSIDRYTPGGPDSQHHSQPPRLP 129
           + EAT+   SSS +++RK GYSK QMEH RRL S+S +RY PGGPDSQHHSQPPRLP
Sbjct: 38  VEEATERISSSSNMVMRKFGYSKRQMEHLRRLSSSSTERYIPGGPDSQHHSQPPRLP 94

[Close]
BLAST of Moc04g01030 vs. ExPASy TrEMBL
Match: A0A5D3C664 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00250 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.6e-11
Identity = 44/70 (62.86%), Postives = 50/70 (71.43%), Query Frame = 0 

Query: 63  AVAGRHAPPPP--LSEATQ--ISSSIIMLRKLGYSKTQMEHFRRLYSNSIDRYTPGGPDS 122
           A A RHA   P  + EAT+   SS  +++RK GYSK QMEH RRL S+S  RY PGGPDS
Sbjct: 24  AAADRHATALPWTVEEATERISSSRNMIMRKFGYSKRQMEHLRRLSSSSTARYIPGGPDS 83

Query: 123 QHHSQPPRLP 129
           QHHSQPPRLP
Sbjct: 84  QHHSQPPRLP 93

[Close]
BLAST of Moc04g01030 vs. ExPASy TrEMBL
Match: A0A7J9BSX3 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_012535 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.8e-05
Identity = 24/49 (48.98%), Postives = 38/49 (77.55%), Query Frame = 0 

Query: 82  SSIIMLRKLGYSKTQMEHFRRLYS--NSIDRYTPGGPDSQHHSQPPRLP 129
           SS ++LRKLGY + ++EH+R++++     DR +PGGPD +HH+ PPR+P
Sbjct: 30  SSRLLLRKLGYDRNKLEHYRQVFALKADSDRVSPGGPDHEHHAHPPRMP 78

[Close]
BLAST of Moc04g01030 vs. ExPASy TrEMBL
Match: A0A2P5YW95 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A09G002500v1 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.1e-05
Identity = 23/49 (46.94%), Postives = 38/49 (77.55%), Query Frame = 0 

Query: 82  SSIIMLRKLGYSKTQMEHFRRLYS--NSIDRYTPGGPDSQHHSQPPRLP 129
           SS ++LR+LGY + ++EH+R++++     DR +PGGPD +HH+ PPR+P
Sbjct: 30  SSRLLLRELGYDRNKLEHYRQVFALKADSDRVSPGGPDHEHHAHPPRMP 78

[Close]
BLAST of Moc04g01030 vs. ExPASy TrEMBL
Match: A0A5D2TG78 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A09G002300v1 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 5.1e-05
Identity = 23/49 (46.94%), Postives = 38/49 (77.55%), Query Frame = 0 

Query: 82  SSIIMLRKLGYSKTQMEHFRRLYS--NSIDRYTPGGPDSQHHSQPPRLP 129
           SS ++LR+LGY + ++EH+R++++     DR +PGGPD +HH+ PPR+P
Sbjct: 30  SSRLLLRELGYDRNKLEHYRQVFALKADSDRVSPGGPDHEHHAHPPRMP 78

[Close]
BLAST of Moc04g01030 vs. TAIR 10
Match: AT2G31082.1 (CLAVATA3/ESR-RELATED 7 )

HSP 1 Score: 45.8 bits (107), Expect = 3.0e-05
Identity = 21/53 (39.62%), Postives = 35/53 (66.04%), Query Frame = 0 

Query: 74  LSEATQISSSIIMLRKLGYSKTQMEHFRRLYS--NSIDRYTPGGPDSQHHSQP 125
           ++  T+   S  +L++LGY+ ++++   R  S  N +DR++PGGPD QHHS P
Sbjct: 27  VNSKTKDGESNDLLKRLGYNVSELKRIGRELSVQNEVDRFSPGGPDPQHHSYP 79

The following BLAST results are available for this feature:
BLAST of Moc04g01030 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589262.12.3e-1571.21hypothetical protein SDJN03_17827, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0061638.13.4e-1162.86hypothetical protein E6C27_scaffold212G00060 [Cucumis melo var. makuwa] >TYK0586... [more]
KAE8647339.11.9e-0966.67hypothetical protein Csa_003556, partial [Cucumis sativus][more]
KAG6572409.12.4e-0956.00hypothetical protein SDJN03_29137, partial [Cucurbita argyrosperma subsp. sorori... [more]
MBA0739247.13.6e-0548.98hypothetical protein [Gossypium gossypioides][more]
BLAST of Moc04g01030 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8S8N14.2e-0439.62CLAVATA3/ESR (CLE)-related protein 7 OS=Arabidopsis thaliana OX=3702 GN=CLE7 PE=... [more]
BLAST of Moc04g01030 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGI41.3e-1168.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419510 PE=3 SV=1[more]
A0A5D3C6641.6e-1162.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A7J9BSX31.8e-0548.98Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_012535 PE=3 ... [more]
A0A2P5YW955.1e-0546.94Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A09G002500v1 PE... [more]
A0A5D2TG785.1e-0546.94Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A09G002300v1 P... [more]
BLAST of Moc04g01030 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G31082.13.0e-0539.62CLAVATA3/ESR-RELATED 7 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..78
NoneNo IPR availablePANTHERPTHR36016:SF9SUBFAMILY NOT NAMEDcoord: 80..128
IPR039617CLAVATA3/ESR (CLE)-related proteinPANTHERPTHR36016CLAVATA3/ESR (CLE)-RELATED PROTEIN 7coord: 80..128

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc04g01030.1Moc04g01030.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045168 cell-cell signaling involved in cell fate commitment
cellular_component GO:0005615 extracellular space