Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAGACACTACAACGCCCGCGTTCGACCTCGGACCTTCCAAGTCGGACATATGGTCTTAAGGAAGGTCCAAACCCATGTGAGTGCCCTTGACCCGACCTGGGAGGGGCCGTTTGAGGTCAAGGGAATAGTCCGACCTGGGACGTACATATTGGCCGATCTGAAAGGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
mRNA sequence
ATGACCAGACACTACAACGCCCGCGTTCGACCTCGGACCTTCCAAGTCGGACATATGGTCTTAAGGAAGGTCCAAACCCATGTGAGTGCCCTTGACCCGACCTGGGAGGGGCCGTTTGAGGTCAAGGGAATAGTCCGACCTGGGACGTACATATTGGCCGATCTGAAAGGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
Coding sequence (CDS)
ATGACCAGACACTACAACGCCCGCGTTCGACCTCGGACCTTCCAAGTCGGACATATGGTCTTAAGGAAGGTCCAAACCCATGTGAGTGCCCTTGACCCGACCTGGGAGGGGCCGTTTGAGGTCAAGGGAATAGTCCGACCTGGGACGTACATATTGGCCGATCTGAAAGGAGACGTCCTCGCGCACCCGTGGAACGCGGAGCACCTGAAGCGTTATTATCCTTGA
Protein sequence
MTRHYNARVRPRTFQVGHMVLRKVQTHVSALDPTWEGPFEVKGIVRPGTYILADLKGDVLAHPWNAEHLKRYYP
Homology
BLAST of Moc02g13940 vs. NCBI nr
Match:
XP_022159003.1 (uncharacterized protein LOC111025448 [Momordica charantia])
HSP 1 Score: 130.2 bits (326), Expect = 7.4e-27
Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0
Query: 1 MTRHYNARVRPRTFQVGHMVLRKVQTHVSALDPTWEGPFEVKGIVRPGTYILADLKGDVL 60
M RHYN R++PR+FQVGH+V K+Q+HV LDP+WE FEVKGIVRPGTY+LADL+ VL
Sbjct: 556 MARHYNTRIQPRSFQVGHLVSSKIQSHVGTLDPSWEELFEVKGIVRPGTYMLADLERSVL 615
Query: 61 AHPWNAEHLKRYYP 75
AHPWNAEHLKRYYP
Sbjct: 616 AHPWNAEHLKRYYP 629
BLAST of Moc02g13940 vs. NCBI nr
Match:
XP_022156070.1 (uncharacterized protein K02A2.6-like [Momordica charantia])
HSP 1 Score: 109.4 bits (272), Expect = 1.4e-20
Identity = 46/63 (73.02%), Postives = 57/63 (90.48%), Query Frame = 0
Query: 1 MTRHYNARVRPRTFQVGHMVLRKVQTHVSALDPTWEGPFEVKGIVRPGTYILADLKGDVL 60
M RHYN+RVR R+FQ+G++VLRKVQ HV L+P+WEGPFEVKGIVRPGTY+LADL+G +L
Sbjct: 288 MARHYNSRVRSRSFQIGYLVLRKVQKHVEVLEPSWEGPFEVKGIVRPGTYMLADLEGKLL 347
Query: 61 AHP 64
+HP
Sbjct: 348 SHP 350
BLAST of Moc02g13940 vs. NCBI nr
Match:
XP_022144032.1 (uncharacterized protein LOC111013824 [Momordica charantia])
HSP 1 Score: 104.8 bits (260), Expect = 3.3e-19
Identity = 43/55 (78.18%), Postives = 51/55 (92.73%), Query Frame = 0
Query: 20 VLRKVQTHVSALDPTWEGPFEVKGIVRPGTYILADLKGDVLAHPWNAEHLKRYYP 75
V +K+Q+HV LDP+WEGPFEVKGI+R GTY+LADL+G+VLAHPWNAEHLKRYYP
Sbjct: 414 VEQKIQSHVGTLDPSWEGPFEVKGIIRFGTYMLADLEGNVLAHPWNAEHLKRYYP 468
BLAST of Moc02g13940 vs. NCBI nr
Match:
XP_022156986.1 (uncharacterized protein LOC111023816 [Momordica charantia])
HSP 1 Score: 101.3 bits (251), Expect = 3.7e-18
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 0
Query: 1 MTRHYNARVRPRTFQVGHMVLRKVQTHVSALDPTWEGPFEVKGIVRPGTYILADLKGDVL 60
M R+YNARV+ RTF+ +VL+KV HV AL+P WEGP+ V I+RP Y+L+DL G L
Sbjct: 772 MARYYNARVKVRTFKPSDLVLKKVMQHVGALEPNWEGPYRVLKILRPRAYLLSDLNGRQL 831
Query: 61 AHPWNAEHLKRYY 74
HPWNAEHL+ YY
Sbjct: 832 PHPWNAEHLRVYY 844
BLAST of Moc02g13940 vs. NCBI nr
Match:
XP_022156049.1 (uncharacterized protein LOC111023017 [Momordica charantia])
HSP 1 Score: 95.1 bits (235), Expect = 2.7e-16
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0
Query: 1 MTRHYNARVRPRTFQVGHMVLRKVQTHVSALDPTWEGPFEVKGIVRPGTYILADLKGDVL 60
M R+YN R R RTF+ G + L+KV HV AL+P WEGP+ V +VRP Y+L+DL G L
Sbjct: 118 MARYYNTRERVRTFKPGDLNLKKVMQHVEALEPNWEGPYRVLKVVRPRAYLLSDLNGRQL 177
Query: 61 AHPWNAEHLKRYY 74
HPWNAE L+ YY
Sbjct: 178 PHPWNAEPLRVYY 190
BLAST of Moc02g13940 vs. ExPASy TrEMBL
Match:
A0A6J1DXL9 (uncharacterized protein LOC111025448 OS=Momordica charantia OX=3673 GN=LOC111025448 PE=4 SV=1)
HSP 1 Score: 130.2 bits (326), Expect = 3.6e-27
Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0
Query: 1 MTRHYNARVRPRTFQVGHMVLRKVQTHVSALDPTWEGPFEVKGIVRPGTYILADLKGDVL 60
M RHYN R++PR+FQVGH+V K+Q+HV LDP+WE FEVKGIVRPGTY+LADL+ VL
Sbjct: 556 MARHYNTRIQPRSFQVGHLVSSKIQSHVGTLDPSWEELFEVKGIVRPGTYMLADLERSVL 615
Query: 61 AHPWNAEHLKRYYP 75
AHPWNAEHLKRYYP
Sbjct: 616 AHPWNAEHLKRYYP 629
BLAST of Moc02g13940 vs. ExPASy TrEMBL
Match:
A0A6J1DP99 (uncharacterized protein K02A2.6-like OS=Momordica charantia OX=3673 GN=LOC111023037 PE=4 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 6.6e-21
Identity = 46/63 (73.02%), Postives = 57/63 (90.48%), Query Frame = 0
Query: 1 MTRHYNARVRPRTFQVGHMVLRKVQTHVSALDPTWEGPFEVKGIVRPGTYILADLKGDVL 60
M RHYN+RVR R+FQ+G++VLRKVQ HV L+P+WEGPFEVKGIVRPGTY+LADL+G +L
Sbjct: 288 MARHYNSRVRSRSFQIGYLVLRKVQKHVEVLEPSWEGPFEVKGIVRPGTYMLADLEGKLL 347
Query: 61 AHP 64
+HP
Sbjct: 348 SHP 350
BLAST of Moc02g13940 vs. ExPASy TrEMBL
Match:
A0A6J1CSJ1 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013824 PE=4 SV=1)
HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19
Identity = 43/55 (78.18%), Postives = 51/55 (92.73%), Query Frame = 0
Query: 20 VLRKVQTHVSALDPTWEGPFEVKGIVRPGTYILADLKGDVLAHPWNAEHLKRYYP 75
V +K+Q+HV LDP+WEGPFEVKGI+R GTY+LADL+G+VLAHPWNAEHLKRYYP
Sbjct: 414 VEQKIQSHVGTLDPSWEGPFEVKGIIRFGTYMLADLEGNVLAHPWNAEHLKRYYP 468
BLAST of Moc02g13940 vs. ExPASy TrEMBL
Match:
A0A6J1DWM2 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023816 PE=4 SV=1)
HSP 1 Score: 101.3 bits (251), Expect = 1.8e-18
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 0
Query: 1 MTRHYNARVRPRTFQVGHMVLRKVQTHVSALDPTWEGPFEVKGIVRPGTYILADLKGDVL 60
M R+YNARV+ RTF+ +VL+KV HV AL+P WEGP+ V I+RP Y+L+DL G L
Sbjct: 772 MARYYNARVKVRTFKPSDLVLKKVMQHVGALEPNWEGPYRVLKILRPRAYLLSDLNGRQL 831
Query: 61 AHPWNAEHLKRYY 74
HPWNAEHL+ YY
Sbjct: 832 PHPWNAEHLRVYY 844
BLAST of Moc02g13940 vs. ExPASy TrEMBL
Match:
A0A2N9FYD5 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19666 PE=4 SV=1)
HSP 1 Score: 97.4 bits (241), Expect = 2.6e-17
Identity = 43/79 (54.43%), Postives = 53/79 (67.09%), Query Frame = 0
Query: 1 MTRHYNARVRPRTFQVGHMVLRKV-----QTHVSALDPTWEGPFEVKGIVRPGTYILADL 60
M RHYN+RV+PR +G +VLRKV L P WEGP++V + RPGTY L D+
Sbjct: 1443 MARHYNSRVKPRQLSIGDLVLRKVTLATRNPSEGKLGPNWEGPYKVVEVRRPGTYHLEDM 1502
Query: 61 KGDVLAHPWNAEHLKRYYP 75
G L+HPWNAEHL+RYYP
Sbjct: 1503 NGRRLSHPWNAEHLRRYYP 1521
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DXL9 | 3.6e-27 | 74.32 | uncharacterized protein LOC111025448 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1DP99 | 6.6e-21 | 73.02 | uncharacterized protein K02A2.6-like OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1CSJ1 | 1.6e-19 | 78.18 | Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013824 PE=4 SV=1 | [more] |
A0A6J1DWM2 | 1.8e-18 | 58.90 | Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111023816 PE=4 SV=1 | [more] |
A0A2N9FYD5 | 2.6e-17 | 54.43 | Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19666 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |