Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATCCAGTGGAAAGTCACATCACTACTTCGAGGGAGTTTTAAGATTTGACGGGAAAAATTTCGGGTTTTGGAAAATGCAAGTGACAGATCTTCTTACATACAAGAAGATACACAAAACCTTGAAGGAACGACAGGCTGGGATGACAGATAAAGATTGGGCGGAGATGGATGAACAGGCCGTAGCGATTATCAGGTTGTGTTTGTCAATGAGTGTGGCGAGTCTTGTGGTGAGCCAAAAAATAGCAATTGATGGGATGTGAATCTCAGAGCGAAAGTGGATCCTCGTTCATGATTTTTTGAGAAAACAAAACAAATGTTCTAAGATGAAAAATACAGGAGAAACTTACATTTGAAGAACTTTTCTTCAACGATTTCCACCCGAACACCACCAAATGATCTTCCGTGCTATCCTTTTGGGTCTCGAGATTGCGCTTGTGGGAGCAATTCTTTGGAACGAGAGGGAGAGTTTCTTTAGAATTTGCCACAACACCACTGTTATCACAATAAAGTGTGATGGGCAAATTCATGTTTGGAACGACTTCCAAATATGTCAAGAACTTTCTAAGCTAAACCGCCTCTTTTGCTGCTTCACAAGCTGCAACGTACTCAGCCTCCATGGTGGAGTCAGCGATGCATCCTTGTTTGATGCTTCGCCAAACTACCGCTCCTCCGTTAAGAGTGAATACTGACCTCGACGTGGATGGTAGCTGGAAGCTAGTGAGGGGATCCAAGGTAGTGGCAGTTGGCCACAAAGAAGCTTTAGTATATGTGTCTAGATTTGAAGTTGTTAGAGGATCAAAAAGGCAGAGGATGCACAGGACTGCAGATGGTTCAAGGCGAGATTTGAAAGAATCAGTAGCATTGACAACCAGAACAGATCAGAAGAATCTGTCATCAGTTCAAAGTACAACAACTAGGAAGTAAAGAGAGGGGAAAAAGGAACAGCTCAGTGAGGTGTTCAACATGTTGTCAGTTTCTAGCACCAGTTGTCAGACGGTTTGGCGAGCTGATGAAATCGCATAGGCGACAAAGTGCATCAAGGGAGAAGATTACAGTTGGTGCTGAGGTCGAGTGTAATGTCTTTAGAGTGGCAACATAATTGGGTGGGTGTGCCAAGTTATCAAAAGGGAAGTCTTTCTTTAGAGGTCGTTGGGTTCGATTGAGGAAGGAAGCATCGGGGACCACTTAGATCGAGTGGGAGCACGTGACTGTGTCTCTAGCGTCTGGGAGACTAGACCACGTAGGATTGCTCAGTCTCGGAGCAATCACAGACGGAGCTTGGATAGGTCCAAGCAAATGAGAGTCAGTTACTGTTGGTGCAGTTAAAACTGAGCCTTGGCGGGATTGCCAAGATGATGGGTTTGCAGTACAAGATTGTTGTTTTGTCTCCAAGTAGGAGATTGTTAGTTGTGGAGACAAAAAAGATTACAAAAGAGAGGCGACGGCTCGAAGTTGGCAACATATAGAGGGGCAAATCGAGATCGACATATTTGGGTAATTAGTTCTCGATTTTATTGTGAGTGTTTTTCATTCCTTGTACATAAGTATATTGGGGTTAAATACTTAGAAGTTAGGGGACTTTTATTGAGATCTCAAAATCTGTGGGGAGATATATATTCGAGAGTGCCTTGTAATCCAATTTCATATTATGGTGGAACCCGCATCTGAGCGTAGCCCATAAATCGTTGAGGTGAACCAGTATAAATCTTGTGTCACTTTATTGTTTTCCCTATTTTTCTCTTGTATTATGTGATTGTATTAGGTAATTGGATAAAACTCTGGAAAGGGAAATTGTGTTGGAGTATCAAATTTCCCAACACGTACCTCCAAAAGGATCGAAAACTAAAAGTATAGAGATGAAAATAGTATTTTAATTTTAATTTTATGAAAATTTTCTTGAATGAAATATCCAGTTTATTGTATCTCACCGAAAATATACTTTAATGTTGTACTAAAAAAAGGAAAAAAAAAAGCGAAAAATACTTTAATAAAAAGTTGTATTGTCCCTACATTTTTTTTTTTTTATGAAATAAAAACACACCACACATGGTGTTTTTTTTTCCCTTTTTTATAATATTCATCGAGTAATTATGTTAATTATTTTTTATAAAATTAAGTATAAACCGCATGTGGTTCAGTAGCCTGAAATGACAAAAATTGGAAAAAAAATTTAGTATTACTTGGAGTATCATTCTCTCTTACACGTACTATTTGTCATATCAGAATCGATTCGTTCCATCTATTTTGTGTATGGAAGGGAGTATGGTATTCCCATATATGATTAGTAAAGATCTTAATTACATAAAAGATGGAATGTATAGAATTTACACTTTTGAAAAAATTTATTTAAGATGGTACTCATCGCCTAAATTACAAAACTATCCTTTTGTATCTACACATTAATATTAATTGATTTTTAAATTCTAGAATTCATTAATTGGAAGGTTATATTTTGAATCTCATAATAATATTTGTTTAATGATACTTTCCAAAAGAAACTAAAATACTAAAATATCCAAAAATATCTCCAAATCCTCGAATTCGAAAACCTCCAAAAATATCCTCAAATTCCTCAATTTTAAAAACCCCCAAATTCGAAAATAGTGACGGTTCGTGTCTTCTTCTCCGTTGGTCGGGATTGTTCTTCCGACTGCTTGCTCCTTCTCCGACGATTCACCTCAATTTCGCCTGCTTCATCCGTATCCGACGTTTCACCTCCATTCGTCTGCTTCATCTGTCTCAGAGGTTTAGTATCCATCGCAGAGGTTTCTTATTCGTGTCCTCCATTTCGTCCTCTCGTCTTTCACTGTTTCCGGTGCCGAGGAGTGCGTTCCCTCATCTCCGGTCCCCACGTCCGTTTATCCCAAAATTAAGGTATGCATCCCAATATATCCTAGTATTTAATAGGTATATATATTATATTCACTATATCTATAATAAAATTTCATTTCAAAATTGTTCACAGTGTATACATTATATCCTAGAAATATACCGATGAATACTTAATTATTAATATTCTATAATAATACGCAATAGGTAAGTTATATCCTACGTTAACGGTGTATATACATAATGTTATTTACCTTACGAATCTTAGTAGATTTCAGAAGTACAAGTAGAATATATATTATAACCTATATATAACATAAACATAAAAATCAAATAACGAAACAACATGAACGTAATTGAATGCATAATAAGAAATATATATACAAAGAAATTGGGATGTCTTGGTTGGCCTTATGCAAAGAAATTGGGAAATAAAAAAAATTATTAGAATAATCGTGGTGGCTCAAATGTAATCAAACATTTTAACCAAACTTGTTTTAACAAAATTGGAAATTGGAAGGGGTTAATTGAGTGGGTAGAACAAATCCGAATCATTCTAACAAAATTGGATATTGGAAATTGAAAGTGGTTAATTGCGTGGGAGGAAAAAAATCATACGGACAGAGGCAAAAACCTTGTTTTAACGGAATTGGATATTTTTTGAATTAATAATAATGGTTGCGTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCTTGGCTGCACCCCTATCTCCTTTATCAGTCATTTAGGGGCCTTAGCTGGTGATCCACGCTATTTCCCTCTCGACGATGAAGCTTATCCCTCATCGTCTCACTCGCTGATCTTGACTCTTGTTATTTTGAGATCATATCTAGTATTCAGAGTTTGCCTCGATTTGGTATCGCTCTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATAA
mRNA sequence
ATGGGATCCAGTGGAAAGTCACATCACTACTTCGAGGGAGTTTTAAGATTTGACGGGAAAAATTTCGGGTTTTGGAAAATGCAAGTGACAGATCTTCTTACATACAAGAAGATACACAAAACCTTGAAGGAACGACAGGCTGGGATGACAGATAAAGATTGGGCGGAGATGGATGAACAGGCCGTAGCGATTATCAGCTGGAAGCTAGTGAGGGGATCCAAGGTAGTGGCAGTTGGCCACAAAGAAGCTTTAGTATATGTGTCTAGATTTGAAGTTGTTAGAGGATCAAAAAGGCAGAGGATGCACAGGACTGCAGATGGTTCAAGGCGAGATTTGAAAGAATCAGTAGCATTGACAACCAGAACAGATCAGAAGAATCTGTCATCAGTTCAAACACCAGTTGTCAGACGGTTTGGCGAGCTGATGAAATCGCATAGGCGACAAAGTGCATCAAGGGAGAAGATTACAGTTGGTGCTGAGAGGTCGTTGGGTTCGATTGAGGAAGGAAGCATCGGGGACCACTTAGATCGAGTGGGAGCACGTGACTGTGTCTCTAGCGTCTGGGAGACTAGACCACGTAGGATTGCTCAGTCTCGGAGCAATCACAGACGGAGCTTGGATAGTCATTTAGGGGCCTTAGCTGGTGATCCACGCTATTTCCCTCTCGACGATGAAGCTTATCCCTCATCGTCTCACTCGCTGATCTTGACTCTTGTTATTTTGAGATCATATCTAGTATTCAGAGTTTGCCTCGATTTGGTATCGCTCTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATAA
Coding sequence (CDS)
ATGGGATCCAGTGGAAAGTCACATCACTACTTCGAGGGAGTTTTAAGATTTGACGGGAAAAATTTCGGGTTTTGGAAAATGCAAGTGACAGATCTTCTTACATACAAGAAGATACACAAAACCTTGAAGGAACGACAGGCTGGGATGACAGATAAAGATTGGGCGGAGATGGATGAACAGGCCGTAGCGATTATCAGCTGGAAGCTAGTGAGGGGATCCAAGGTAGTGGCAGTTGGCCACAAAGAAGCTTTAGTATATGTGTCTAGATTTGAAGTTGTTAGAGGATCAAAAAGGCAGAGGATGCACAGGACTGCAGATGGTTCAAGGCGAGATTTGAAAGAATCAGTAGCATTGACAACCAGAACAGATCAGAAGAATCTGTCATCAGTTCAAACACCAGTTGTCAGACGGTTTGGCGAGCTGATGAAATCGCATAGGCGACAAAGTGCATCAAGGGAGAAGATTACAGTTGGTGCTGAGAGGTCGTTGGGTTCGATTGAGGAAGGAAGCATCGGGGACCACTTAGATCGAGTGGGAGCACGTGACTGTGTCTCTAGCGTCTGGGAGACTAGACCACGTAGGATTGCTCAGTCTCGGAGCAATCACAGACGGAGCTTGGATAGTCATTTAGGGGCCTTAGCTGGTGATCCACGCTATTTCCCTCTCGACGATGAAGCTTATCCCTCATCGTCTCACTCGCTGATCTTGACTCTTGTTATTTTGAGATCATATCTAGTATTCAGAGTTTGCCTCGATTTGGTATCGCTCTCGCGGCCCGCACCGAAACAGTGCTTTACCCCTAGATAA
Protein sequence
MGSSGKSHHYFEGVLRFDGKNFGFWKMQVTDLLTYKKIHKTLKERQAGMTDKDWAEMDEQAVAIISWKLVRGSKVVAVGHKEALVYVSRFEVVRGSKRQRMHRTADGSRRDLKESVALTTRTDQKNLSSVQTPVVRRFGELMKSHRRQSASREKITVGAERSLGSIEEGSIGDHLDRVGARDCVSSVWETRPRRIAQSRSNHRRSLDSHLGALAGDPRYFPLDDEAYPSSSHSLILTLVILRSYLVFRVCLDLVSLSRPAPKQCFTPR
Homology
BLAST of Moc02g12920 vs. NCBI nr
Match:
KAA0046291.1 (putative endo-1,3(4)-beta-glucanase 2 [Cucumis melo var. makuwa])
HSP 1 Score: 111.7 bits (278), Expect = 9.9e-21
Identity = 55/64 (85.94%), Postives = 57/64 (89.06%), Query Frame = 0
Query: 205 SLDSHLGALAGDPRYFPLDDEAYPSSSHSLILTLVILRSYLVFRVCLDLVSLSRPAPKQC 264
SL SHLGALAGDP FPLDDEAYPSSSHS LTLVILRSYL+FRVCL+LV LS PAPKQC
Sbjct: 53 SLSSHLGALAGDPSCFPLDDEAYPSSSHSPTLTLVILRSYLIFRVCLNLVLLSLPAPKQC 112
Query: 265 FTPR 269
FTPR
Sbjct: 113 FTPR 116
BLAST of Moc02g12920 vs. NCBI nr
Match:
KAA0058983.1 (putative endo-1,3(4)-beta-glucanase 2 [Cucumis melo var. makuwa])
HSP 1 Score: 109.0 bits (271), Expect = 6.4e-20
Identity = 54/64 (84.38%), Postives = 56/64 (87.50%), Query Frame = 0
Query: 205 SLDSHLGALAGDPRYFPLDDEAYPSSSHSLILTLVILRSYLVFRVCLDLVSLSRPAPKQC 264
SL SHLGALAGDP FPLDDEAYPS SHS LTLVILRSYL+FRVCL+LV LS PAPKQC
Sbjct: 53 SLSSHLGALAGDPGCFPLDDEAYPSLSHSPTLTLVILRSYLIFRVCLNLVLLSLPAPKQC 112
Query: 265 FTPR 269
FTPR
Sbjct: 113 FTPR 116
BLAST of Moc02g12920 vs. NCBI nr
Match:
GEU30309.1 (reverse transcriptase domain-containing protein [Tanacetum cinerariifolium])
HSP 1 Score: 107.8 bits (268), Expect = 1.4e-19
Identity = 54/64 (84.38%), Postives = 54/64 (84.38%), Query Frame = 0
Query: 205 SLDSHLGALAGDPRYFPLDDEAYPSSSHSLILTLVILRSYLVFRVCLDLVSLSRPAPKQC 264
SL HLGALAGDP FPLDDEAYP SSH LT VILRSYLVFRVCLDLV LSRPAPKQC
Sbjct: 317 SLSGHLGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRSYLVFRVCLDLVPLSRPAPKQC 376
Query: 265 FTPR 269
FTPR
Sbjct: 377 FTPR 380
BLAST of Moc02g12920 vs. NCBI nr
Match:
PLY86165.1 (hypothetical protein LSAT_6X94260 [Lactuca sativa])
HSP 1 Score: 107.8 bits (268), Expect = 1.4e-19
Identity = 54/64 (84.38%), Postives = 54/64 (84.38%), Query Frame = 0
Query: 205 SLDSHLGALAGDPRYFPLDDEAYPSSSHSLILTLVILRSYLVFRVCLDLVSLSRPAPKQC 264
SL HLGALAGDP FPLDDEAYP SSH LT VILRSYLVFRVCLDLV LSRPAPKQC
Sbjct: 46 SLSDHLGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRSYLVFRVCLDLVPLSRPAPKQC 105
Query: 265 FTPR 269
FTPR
Sbjct: 106 FTPR 109
BLAST of Moc02g12920 vs. NCBI nr
Match:
KAG8363221.1 (hypothetical protein BUALT_BualtPtG0005500 [Buddleja alternifolia])
HSP 1 Score: 106.3 bits (264), Expect = 4.2e-19
Identity = 53/64 (82.81%), Postives = 53/64 (82.81%), Query Frame = 0
Query: 205 SLDSHLGALAGDPRYFPLDDEAYPSSSHSLILTLVILRSYLVFRVCLDLVSLSRPAPKQC 264
SL HLGALAGDP FPLDDEAYP SSH LT VI RSYLVFRVCLDLV LSRPAPKQC
Sbjct: 46 SLSDHLGALAGDPGCFPLDDEAYPPSSHWPTLTPVIFRSYLVFRVCLDLVPLSRPAPKQC 105
Query: 265 FTPR 269
FTPR
Sbjct: 106 FTPR 109
BLAST of Moc02g12920 vs. ExPASy TrEMBL
Match:
A0A5A7TY58 (Putative endo-1,3(4)-beta-glucanase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1457G00020 PE=4 SV=1)
HSP 1 Score: 111.7 bits (278), Expect = 4.8e-21
Identity = 55/64 (85.94%), Postives = 57/64 (89.06%), Query Frame = 0
Query: 205 SLDSHLGALAGDPRYFPLDDEAYPSSSHSLILTLVILRSYLVFRVCLDLVSLSRPAPKQC 264
SL SHLGALAGDP FPLDDEAYPSSSHS LTLVILRSYL+FRVCL+LV LS PAPKQC
Sbjct: 53 SLSSHLGALAGDPSCFPLDDEAYPSSSHSPTLTLVILRSYLIFRVCLNLVLLSLPAPKQC 112
Query: 265 FTPR 269
FTPR
Sbjct: 113 FTPR 116
BLAST of Moc02g12920 vs. ExPASy TrEMBL
Match:
A0A5A7USR7 (Putative endo-1,3(4)-beta-glucanase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1268G00020 PE=4 SV=1)
HSP 1 Score: 109.0 bits (271), Expect = 3.1e-20
Identity = 54/64 (84.38%), Postives = 56/64 (87.50%), Query Frame = 0
Query: 205 SLDSHLGALAGDPRYFPLDDEAYPSSSHSLILTLVILRSYLVFRVCLDLVSLSRPAPKQC 264
SL SHLGALAGDP FPLDDEAYPS SHS LTLVILRSYL+FRVCL+LV LS PAPKQC
Sbjct: 53 SLSSHLGALAGDPGCFPLDDEAYPSLSHSPTLTLVILRSYLIFRVCLNLVLLSLPAPKQC 112
Query: 265 FTPR 269
FTPR
Sbjct: 113 FTPR 116
BLAST of Moc02g12920 vs. ExPASy TrEMBL
Match:
A0A6L2J018 (Reverse transcriptase domain-containing protein OS=Tanacetum cinerariifolium OX=118510 GN=Tci_002287 PE=4 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 6.9e-20
Identity = 54/64 (84.38%), Postives = 54/64 (84.38%), Query Frame = 0
Query: 205 SLDSHLGALAGDPRYFPLDDEAYPSSSHSLILTLVILRSYLVFRVCLDLVSLSRPAPKQC 264
SL HLGALAGDP FPLDDEAYP SSH LT VILRSYLVFRVCLDLV LSRPAPKQC
Sbjct: 317 SLSGHLGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRSYLVFRVCLDLVPLSRPAPKQC 376
Query: 265 FTPR 269
FTPR
Sbjct: 377 FTPR 380
BLAST of Moc02g12920 vs. ExPASy TrEMBL
Match:
A0A2J6LFT8 (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X94260 PE=4 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 6.9e-20
Identity = 54/64 (84.38%), Postives = 54/64 (84.38%), Query Frame = 0
Query: 205 SLDSHLGALAGDPRYFPLDDEAYPSSSHSLILTLVILRSYLVFRVCLDLVSLSRPAPKQC 264
SL HLGALAGDP FPLDDEAYP SSH LT VILRSYLVFRVCLDLV LSRPAPKQC
Sbjct: 46 SLSDHLGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRSYLVFRVCLDLVPLSRPAPKQC 105
Query: 265 FTPR 269
FTPR
Sbjct: 106 FTPR 109
BLAST of Moc02g12920 vs. ExPASy TrEMBL
Match:
A0A2N9I7K2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26797 PE=4 SV=1)
HSP 1 Score: 106.3 bits (264), Expect = 2.0e-19
Identity = 55/66 (83.33%), Postives = 56/66 (84.85%), Query Frame = 0
Query: 204 RSLD-SHLGALAGDPRYFPLDDEAYPSSSHSLILTLVILRSYLVFRVCLDLVSLSRPAPK 263
R+LD HLGALAGDP FPLDDEAYP SSH LT VILRSYLVFRVCLDLV LSRPAPK
Sbjct: 420 RALDHGHLGALAGDPGCFPLDDEAYPPSSHWPTLTPVILRSYLVFRVCLDLVPLSRPAPK 479
Query: 264 QCFTPR 269
QCFTPR
Sbjct: 480 QCFTPR 485
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0046291.1 | 9.9e-21 | 85.94 | putative endo-1,3(4)-beta-glucanase 2 [Cucumis melo var. makuwa] | [more] |
KAA0058983.1 | 6.4e-20 | 84.38 | putative endo-1,3(4)-beta-glucanase 2 [Cucumis melo var. makuwa] | [more] |
GEU30309.1 | 1.4e-19 | 84.38 | reverse transcriptase domain-containing protein [Tanacetum cinerariifolium] | [more] |
PLY86165.1 | 1.4e-19 | 84.38 | hypothetical protein LSAT_6X94260 [Lactuca sativa] | [more] |
KAG8363221.1 | 4.2e-19 | 82.81 | hypothetical protein BUALT_BualtPtG0005500 [Buddleja alternifolia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TY58 | 4.8e-21 | 85.94 | Putative endo-1,3(4)-beta-glucanase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A5A7USR7 | 3.1e-20 | 84.38 | Putative endo-1,3(4)-beta-glucanase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
A0A6L2J018 | 6.9e-20 | 84.38 | Reverse transcriptase domain-containing protein OS=Tanacetum cinerariifolium OX=... | [more] |
A0A2J6LFT8 | 6.9e-20 | 84.38 | Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_6X94260 PE=4 SV=1 | [more] |
A0A2N9I7K2 | 2.0e-19 | 83.33 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26797 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |