MS028262 (gene) Bitter gourd (TR) v1

Overview


Name	MS028262
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Auxin responsive SAUR protein
Location	scaffold47: 1141880 .. 1142164 (-)
RNA-Seq Expression	MS028262
Synteny	MS028262

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATCTCTTTGCCAAGGATTGTGAGTTCAAAGCACTTTCTGAGGCGCATTCATCAGTCTTCGAGAACCGCAGAGGTCCCGAAGGGCCACTTGGCTGTGTATGTTGGAGAGACTGATCAAAAGAAGAGATTTTTGGTCCCTGTTGCATATTTGAGCAACCCTTCATTCCATAGCTTGTTGAGTCAGTCTGAAGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTTACATTCTCTTGTACAGAAGAGATTTTCTTCAGGCATTTGGCTAGAAACAGTTAG

mRNA sequence

ATGGGCATCTCTTTGCCAAGGATTGTGAGTTCAAAGCACTTTCTGAGGCGCATTCATCAGTCTTCGAGAACCGCAGAGGTCCCGAAGGGCCACTTGGCTGTGTATGTTGGAGAGACTGATCAAAAGAAGAGATTTTTGGTCCCTGTTGCATATTTGAGCAACCCTTCATTCCATAGCTTGTTGAGTCAGTCTGAAGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTTACATTCTCTTGTACAGAAGAGATTTTCTTCAGGCATTTGGCTAGAAACAGTTAG

Coding sequence (CDS)

ATGGGCATCTCTTTGCCAAGGATTGTGAGTTCAAAGCACTTTCTGAGGCGCATTCATCAGTCTTCGAGAACCGCAGAGGTCCCGAAGGGCCACTTGGCTGTGTATGTTGGAGAGACTGATCAAAAGAAGAGATTTTTGGTCCCTGTTGCATATTTGAGCAACCCTTCATTCCATAGCTTGTTGAGTCAGTCTGAAGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTTACATTCTCTTGTACAGAAGAGATTTTCTTCAGGCATTTGGCTAGAAACAGTTAG

Protein sequence

MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS

Homology

[Close]

BLAST of MS028262 vs. NCBI nr
Match: XP_022135927.1 (indole-3-acetic acid-induced protein ARG7-like [Momordica charantia])

HSP 1 Score: 182.6 bits (462), Expect = 1.6e-42
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60
          MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL
Sbjct: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60

Query: 61 LSQSEEEFGYDHPMGGLTFSCTEEIFFR 89
          LSQSEEEFGYDHPMGGLTFSCTEEIFFR
Sbjct: 61 LSQSEEEFGYDHPMGGLTFSCTEEIFFR 88

[Close]

BLAST of MS028262 vs. NCBI nr
Match: KAG6572091.1 (hypothetical protein SDJN03_28819, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167.9 bits (424), Expect = 4.1e-38
Identity = 82/94 (87.23%), Postives = 89/94 (94.68%), Query Frame = 0


Query: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60
          MGI LPRIV++KHFLRRI QSSRTA VPKGHLAVYVGET +KKRFLVPVAYL+NPSFHSL
Sbjct: 1  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGET-EKKRFLVPVAYLNNPSFHSL 60

Query: 61 LSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS 95
          LS +EEEFGYDHPMGGLTFSCTEEIFF+HLAR+S
Sbjct: 61 LSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS 93

[Close]

BLAST of MS028262 vs. NCBI nr
Match: KAA0049714.1 (Auxin responsive SAUR protein [Cucumis melo var. makuwa] >TYK12161.1 Auxin responsive SAUR protein [Cucumis melo var. makuwa])

HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36
Identity = 79/94 (84.04%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60
          MGI LPRI   KH+ RRIHQ SRTA VPKGHLAVYVG+T +KKRFLVPVAYLSNPSFH+L
Sbjct: 1  MGIPLPRIAIPKHYSRRIHQLSRTAVVPKGHLAVYVGQT-EKKRFLVPVAYLSNPSFHNL 60

Query: 61 LSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS 95
          LSQ+EEEFGYDHPMGGLTFSCTEEIFF HLAR+S
Sbjct: 61 LSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDS 93

[Close]

BLAST of MS028262 vs. NCBI nr
Match: KAE8645662.1 (hypothetical protein Csa_020396 [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 5.5e-35
Identity = 78/94 (82.98%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1   MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60
           MGI LPRI   KHF  RI Q SRTA VPKGHLAVYVGET +KKRFLVPVAYL NPSFH+L
Sbjct: 75  MGIPLPRIAIPKHFPWRIRQLSRTAAVPKGHLAVYVGET-EKKRFLVPVAYLGNPSFHNL 134

Query: 61  LSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS 95
           LSQ+EEEFGYDHPMGGLTFSCTEEIFF HLAR+S
Sbjct: 135 LSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDS 167

[Close]

BLAST of MS028262 vs. NCBI nr
Match: XP_021602388.1 (auxin-induced protein 15A-like [Manihot esculenta] >KAG8643995.1 hypothetical protein MANES_11G068490v8 [Manihot esculenta])

HSP 1 Score: 122.5 bits (306), Expect = 2.0e-24
Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60
          MGI LPRIVS+K  LRRI  S  T +VPKGH AVYVGE +QKKRF VP++YL +PSF +L
Sbjct: 1  MGIRLPRIVSAKQILRRILLSQETTDVPKGHFAVYVGE-NQKKRFSVPISYLKHPSFQNL 60

Query: 61 LSQSEEEFGYDHPMGGLTFSCTEEIF 87
          LSQ+EEEFG+ HPMGGLT  C+E++F
Sbjct: 61 LSQAEEEFGFHHPMGGLTIPCSEQVF 85

[Close]

BLAST of MS028262 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.3e-20
Identity = 44/69 (63.77%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 18 IHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGL 77
          I ++S+ A+ PKG+LAVYVGE  + KRF++PV+YL+ PSF  LLSQ+EEEFGYDHPMGGL
Sbjct: 8  IRKASKAADAPKGYLAVYVGE--KLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGL 67

Query: 78 TFSCTEEIF 87
          T  C+E++F
Sbjct: 68 TIPCSEDVF 74

[Close]

BLAST of MS028262 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 8.9e-20
Identity = 49/86 (56.98%), Postives = 61/86 (70.93%), Query Frame = 0


Query: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60
          MG  LP I   K  +     SS++ EVPKG+L VYVG  D+ +RFL+PV+YL+ PSF  L
Sbjct: 1  MGFRLPGI--RKTSIAANQASSKSVEVPKGYLVVYVG--DKMRRFLIPVSYLNQPSFQDL 60

Query: 61 LSQSEEEFGYDHPMGGLTFSCTEEIF 87
          L+Q+EEEFGYDHPMGGLT  C E+ F
Sbjct: 61 LNQAEEEFGYDHPMGGLTIPCKEDEF 82

[Close]

BLAST of MS028262 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 8.9e-20
Identity = 43/71 (60.56%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 18 IHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMGGL 77
          I ++S   + PKG+LAVYVGE  + KRF++PV+Y++ PSF  LL+Q+EEEFGYDHPMGGL
Sbjct: 8  IRKASNAVDAPKGYLAVYVGE--KMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGL 67

Query: 78 TFSCTEEIFFR 89
          T  C+EE+F R
Sbjct: 68 TIPCSEEVFQR 76

[Close]

BLAST of MS028262 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.0e-19
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 16 RRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMG 75
          ++I   S  +  PKG LAVYVGE+ QKKR+LVP++YLS PSF +LLS+SEEEFG+DHPMG
Sbjct: 11 KKILSRSTASAAPKGFLAVYVGES-QKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMG 70

Query: 76 GLTFSCTEEIFFRHLAR 93
          GLT  C E+ F    +R
Sbjct: 71 GLTIPCPEDTFINVTSR 86

[Close]

BLAST of MS028262 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.6e-19
Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60
          MG  LP I   K    R   SS+  + PKG+LAVYVGE    KRF++PV++L+ P F  L
Sbjct: 1  MGFRLPGI--RKTLSARNEASSKVLDAPKGYLAVYVGE--NMKRFVIPVSHLNQPLFQDL 60

Query: 61 LSQSEEEFGYDHPMGGLTFSCTEEIF 87
          LSQ+EEEFGYDHPMGGLT  C+E++F
Sbjct: 61 LSQAEEEFGYDHPMGGLTIPCSEDLF 82

[Close]

BLAST of MS028262 vs. ExPASy TrEMBL
Match: A0A6J1C452 (indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN=LOC111007759 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.8e-43
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60
          MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL
Sbjct: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60

Query: 61 LSQSEEEFGYDHPMGGLTFSCTEEIFFR 89
          LSQSEEEFGYDHPMGGLTFSCTEEIFFR
Sbjct: 61 LSQSEEEFGYDHPMGGLTFSCTEEIFFR 88

[Close]

BLAST of MS028262 vs. ExPASy TrEMBL
Match: A0A5D3CK22 (Auxin responsive SAUR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001010 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.4e-37
Identity = 79/94 (84.04%), Postives = 85/94 (90.43%), Query Frame = 0


Query: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60
          MGI LPRI   KH+ RRIHQ SRTA VPKGHLAVYVG+T +KKRFLVPVAYLSNPSFH+L
Sbjct: 1  MGIPLPRIAIPKHYSRRIHQLSRTAVVPKGHLAVYVGQT-EKKRFLVPVAYLSNPSFHNL 60

Query: 61 LSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS 95
          LSQ+EEEFGYDHPMGGLTFSCTEEIFF HLAR+S
Sbjct: 61 LSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDS 93

[Close]

BLAST of MS028262 vs. ExPASy TrEMBL
Match: A0A0A0K4K5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009130 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.7e-35
Identity = 78/94 (82.98%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60
          MGI LPRI   KHF  RI Q SRTA VPKGHLAVYVGET +KKRFLVPVAYL NPSFH+L
Sbjct: 1  MGIPLPRIAIPKHFPWRIRQLSRTAAVPKGHLAVYVGET-EKKRFLVPVAYLGNPSFHNL 60

Query: 61 LSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS 95
          LSQ+EEEFGYDHPMGGLTFSCTEEIFF HLAR+S
Sbjct: 61 LSQAEEEFGYDHPMGGLTFSCTEEIFFSHLARDS 93

[Close]

BLAST of MS028262 vs. ExPASy TrEMBL
Match: A0A199UBQ8 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_S033300 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 9.5e-25
Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = 0


Query: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSL 60
          MGI LPRIVS+K  LRRI  S  T +VPKGH AVYVGE +QKKRF VP++YL +PSF +L
Sbjct: 1  MGIRLPRIVSAKQILRRILLSQETTDVPKGHFAVYVGE-NQKKRFSVPISYLKHPSFQNL 60

Query: 61 LSQSEEEFGYDHPMGGLTFSCTEEIF 87
          LSQ+EEEFG+ HPMGGLT  C+E++F
Sbjct: 61 LSQAEEEFGFHHPMGGLTIPCSEQVF 85

[Close]

BLAST of MS028262 vs. ExPASy TrEMBL
Match: A0A565C4F5 (Uncharacterized protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS18980 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.2e-24
Identity = 57/87 (65.52%), Postives = 68/87 (78.16%), Query Frame = 0


Query: 1  MGISLPRIV-SSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHS 60
          M I +PR++ SSK  L+   QSS   +VPKGHLAVYVGE  QKKRF+VPV YLS+PSF  
Sbjct: 1  MAIRIPRVLQSSKQLLKSFSQSSTNVDVPKGHLAVYVGEKLQKKRFVVPVMYLSHPSFQQ 60

Query: 61 LLSQSEEEFGYDHPMGGLTFSCTEEIF 87
          LL ++EEEFG+DHPMGGLT  CTE+IF
Sbjct: 61 LLKKAEEEFGFDHPMGGLTIPCTEQIF 87

[Close]

BLAST of MS028262 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 1.9e-25
Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 0


Query: 1  MGISLPRIV-SSKHFLRRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHS 60
          M I + R++ SSK  L+ +  SS    +PKGHLAVYVGE  QK+RF+VPV YLS+P F  
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQK 60

Query: 61 LLSQSEEEFGYDHPMGGLTFSCTEEIFFRHLARNS 95
          LL ++EEEFG+DHPMGGLT  CTE+IF    +R S
Sbjct: 61 LLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLS 95

[Close]

BLAST of MS028262 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.1 bits (253), Expect = 2.6e-22
Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 0


Query: 1  MGISLPRIV-SSKHFLRRI-----HQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSN 60
          M I +PR++ SSK  LR+        SS + +VPKG+LAVYVGE +  KRF+VPV+YL  
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNM-KRFVVPVSYLDQ 60

Query: 61 PSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF 87
          PSF  LL ++EEEFG+DHPMGGLT  C+EEIF
Sbjct: 61 PSFQDLLRKAEEEFGFDHPMGGLTIPCSEEIF 91

[Close]

BLAST of MS028262 vs. TAIR 10
Match: AT4G34770.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 99.4 bits (246), Expect = 1.7e-21
Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = 0


Query: 1  MGISLPRIVSSKHFLRR--------IHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYL 60
          MGI L  +  +K  L+R        +  +S T  VPKGH+AVYVGET  +KRF++P++YL
Sbjct: 1  MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISYL 60

Query: 61 SNPSFHSLLSQSEEEFGYDHPMGGLTFSCTEEIF 87
          ++P F  LL+ +EEEFG+DHPMGGLT  CTE+ F
Sbjct: 61 NHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYF 94

[Close]

BLAST of MS028262 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 97.4 bits (241), Expect = 6.3e-21
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 1  MGISLPRIVSSKHFLRRIHQSSRTAEVPKGHLAVYVG-ETDQKKRFLVPVAYLSNPSFHS 60
          M I L R+++SK          + + VPKGH+AVYVG E + KKRF+VP++YL++PSF  
Sbjct: 1  MAIRLSRVINSK------QSQKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSFQG 60

Query: 61 LLSQSEEEFGYDHPMGGLTFSCTEEIF 87
          LLS++EEEFG++HP+GGLT  C EE F
Sbjct: 61 LLSRAEEEFGFNHPIGGLTIPCREETF 81

[Close]

BLAST of MS028262 vs. TAIR 10
Match: AT5G18030.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 96.3 bits (238), Expect = 1.4e-20
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 16 RRIHQSSRTAEVPKGHLAVYVGETDQKKRFLVPVAYLSNPSFHSLLSQSEEEFGYDHPMG 75
          ++I   S  +  PKG LAVYVGE+ QKKR+LVP++YLS PSF +LLS+SEEEFG+DHPMG
Sbjct: 11 KKILSRSTASAAPKGFLAVYVGES-QKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMG 70

Query: 76 GLTFSCTEEIFFRHLAR 93
          GLT  C E+ F    +R
Sbjct: 71 GLTIPCPEDTFINVTSR 86

The following BLAST results are available for this feature:

BLAST of MS028262 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135927.1	1.6e-42	100.00	indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]	[more]
KAG6572091.1	4.1e-38	87.23	hypothetical protein SDJN03_28819, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0049714.1	1.3e-36	84.04	Auxin responsive SAUR protein [Cucumis melo var. makuwa] >TYK12161.1 Auxin respo...	[more]
KAE8645662.1	5.5e-35	82.98	hypothetical protein Csa_020396 [Cucumis sativus]	[more]
XP_021602388.1	2.0e-24	67.44	auxin-induced protein 15A-like [Manihot esculenta] >KAG8643995.1 hypothetical pr...	[more]

BLAST of MS028262 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33081	2.3e-20	63.77	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33080	8.9e-20	56.98	Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33082	8.9e-20	60.56	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q9FJF9	2.0e-19	59.74	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 S...	[more]
P32295	2.6e-19	55.81	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]

BLAST of MS028262 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C452	7.8e-43	100.00	indole-3-acetic acid-induced protein ARG7-like OS=Momordica charantia OX=3673 GN...	[more]
A0A5D3CK22	6.4e-37	84.04	Auxin responsive SAUR protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0K4K5	2.7e-35	82.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G009130 PE=3 SV=1	[more]
A0A199UBQ8	9.5e-25	67.44	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_S033300 PE=3 SV=1	[more]
A0A565C4F5	6.2e-24	65.52	Uncharacterized protein OS=Arabis nemorensis OX=586526 GN=ANE_LOCUS18980 PE=3 SV...	[more]

BLAST of MS028262 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21210.1	1.9e-25	56.84	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	2.6e-22	57.61	SAUR-like auxin-responsive protein family	[more]
AT4G34770.1	1.7e-21	51.06	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	6.3e-21	52.87	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	1.4e-20	59.74	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..90 e-value: 1.9E-22 score: 79.2
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 15..86
None	No IPR available	PANTHER	PTHR31929:SF80	SUBFAMILY NOT NAMED	coord: 15..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS028262.1	MS028262.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin