MS024635 (gene) Bitter gourd (TR) v1

Overview


Name	MS024635
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Pentatricopeptide repeat-containing protein
Location	scaffold127: 1006266 .. 1009438 (-)
RNA-Seq Expression	MS024635
Synteny	MS024635

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGCAAAACCCAAGCTGCGGCAAGCCATAGACTTGCTCTGCTCTCGGGGCAGCGCTTCCTCTGAGGCATACACCCACTTGATCCTCGAATGCGTGCGTACCAATGAAGTCGACCAAGCCAAGAGACTGCAATCTCACATGGAACACCACCTTTTCCAACCCCCTGATCCTTTTCTCCAGAATCAGCTACTTCATTTGTATGCTAAATTTGGGAAAGTTCGAGATGCCCAAAACCTGTTTGATAAAATGCTCGAGAGGGATGTTTTCTCCTGGAATGCGCTGCTCTCTGCGTATGCTAAATCGGGGTCTATCCAGAATTTGCAGGCGACATTTGATCGAATGCCTTTCCGGGATTCGGTTTCATACAATACGACGATTGCTGGGTTTGCTGGAAATGGTTGTCCAAAAGAGTCGCTCGAGCTTTTTAGGAGAATGCAGAGTGAAGGTTTTGTGCCTACGGAGTATACGAATGTGAGTGCATTGAATGCGGCTGCGCAGTTGGTGGATTTGAGGCGTGGGAAAGAAATTCATGGGAGTGTTATTGTGCATAAATTTTTAGGGAATACGTTCATCTGGAATGCTTTAACAGACATGTATGCTAAATGTGGTGAGATTGAACAGGCAAGGTGGCTGTTTGATCATCTTGCTAACAAGAATTTGATTTCTTGGAACTTGATGATATCTGGGTATGTGAAGAATGGACAGCCTGAGAAGTGCATTGGCCTGTTACATGAAATGCAGATGTCTGGTCACATGCCTGATCAAGTTACGATGTCAACTATAATTGCAGCTTACTGTCAATGTCGATGTGTAGATGAAGCAAGAAAGGTGTTTAGTGAATTTAAGGAGAAGGATATTGTTTGCTGGACAGCCATGTTGGTGGGTTATGCAAAGAATGGCAGAGAAGAGGATGCACTGTTGTTGTTTAATGAAATGCTGTTAGAACATGTTAAACCTGACAGCTACACTTTATCAAGTGTTGTCAGTTCATGTTCCAAATTAGCATCTCTGTATCATGGTCAGGCAGTCCATGGGAAATCAATTCTTGCTGGGCTTGATAATAATTTGCTTGTTTCTAGTGCACTAATTGATATGTATTCTAAATGTGGTTTCGTAGACGATGCAAGGTCAGTCTTCAACATGATGCCGACTAGGAATGTGATTTCATGGAATGCTATGATTGTTGGTTATGCTCAAAATGGACATGATAAGGATGCCCTTGCATTCTTTGAAAATATGTTGCAACAGAAATTTAAACCGGATAATGTAACATTTATAGGTGTTTTATCTGCTTGTCTCCATTCTAATTGGATTGAGAAAGGGCAGGGGTATTTTGATTCCATAAGCAATCAACATGGACTGATACCTACTGTGGATCATTATGCGTGTATGGTCAATCTCCTAGGACGTTTGGGCCGCATTGATCAAGCAGTTGATCTAATAAAAAGTATGCCCCATGAACCAGATTGCCTGATCTGGTCCACACTTCTATCAGTTAGTGCAGTGAAGGGTGATATTGCAAATGCAGAAATGGCAGCTAGGTATCTCTTTGAATTGGATCCTCTGAATGCTGTACCTTATGTTATGCTCTCAAATATGTATGCCTCTATGGGTAGATGGAAGGATGTAGCATCAGTTAGGACTCTCATGAAGAGCAAGAATGTCAAAAAATTTGCTGGGTACAGTTGGATTGAGATTGATAATGAGGTGCACAAATTTACATCTGAGGACCGGACTCATCCAGAAACAGAGAAAATATATGAAGAATTGAACATGTTGATTAGGAAATTTCAAGAAGATGGATTTACCCCTAATACAAATCTAGTTTTGCATGATGTCGGGGAGGACGAAAAGTTCAAATCTATATGTTTCCACAGTGAGAAACTTGCACTTGCTTTTGGTCTGGTAAAGAAACCTAATGGAGTTACTCCAATTAGGATTATAAAAAATATTCGCATTTGTAGTGACTGCCATGAATTTATGAAGTTTGCTTCTAGGATTATTAGAAGGCAAATAATCTTGAGAGATTCAAATAGATTTCATCATTTTGCAACTGGGAAATGCTCCTGTAAGGACAACTGGTAACGGATATGCTGGTGTAGATTGGGGGAAGCCACTGAGTTTCAAGGTGAGAAAATGGTGATGCGAGGATACAGAGATCAAAACAAGGAAGAGTAGAAGGTTCAAGGAAAGGCTTCAGGTCCTGAATTTTTCAAAATGCGAAAGCTTAATGACATTTAACTTTCAAAAGTTAGTCGAAATTCTAAAATAGGAAAGAGATTCACACCTTATTAGAGCATGTCATATTACAACATTGAACCGATGGAAGTTTCCTTGTACACATCCTCCGAACTCAGTCTTTTGTGAGACAGAGTCAGTTTTGTGCACTGAGGAACATCAATCTACAACTCACCAACTCCAAGGTTAGTAGTGTAGGAAAATCTCTCATTTGTTATGTATCAGAAGCACACACATCTTTCTTCCACTTTAAATTTCATAGTTATAAGTCAGTCATTCTGATCTTCACCATAAATCAGTTGAAGGATTGGTTAATTCTACACAGGCTTGTGAGACCTCGTAACACTCAAATGTCATTATGTAATTGACAAGTGAAGAGAAACAGAAGACAAGGTGAACCGACACTCTGCCAGGAAAAAAGCATAGAATCCAAGAGGATGTTACAATTAATGAAGGGGACATCATGTCCAAAGAAACGGCTGCAATGATAGCCCTTAGTTCAAGGATGCATAGTAATGACTCGTGGTAGAATAAACAGCGAGAATTCTCTAGTTTTCCAGTGAGAACGAAACAATACAATGTTTAAAGTGGCCTATTTACTTCTCCTGAAATTCCCTTTTACTGGCAGAAAATTTGCTCGCGTAGCTTCTTTCTTTAACATTGATTGATAACTTGTCGATATCTCGACGTTCATGCATGCTTCCTTAGACAGATACTGAATGGTGCCCAAATTTCCATGTAGTACAGGTTCTTCCATAGCCATCAAATGGGCCATTCTTATCTTTCATCTGCTTGCTCACTTGTCTCAGAGTAGGAAAAGGTTGGATTCTGATAATTTGTACTGCAATCAGAAAGAGTTCCATGGTTTGGTGGTAATTATCTTCGTACTTTGTGCTGCAGAACCACGTGCTGGAAACTTGGCTGCTAATTGA

mRNA sequence

ATGCAAGCAAAACCCAAGCTGCGGCAAGCCATAGACTTGCTCTGCTCTCGGGGCAGCGCTTCCTCTGAGGCATACACCCACTTGATCCTCGAATGCGTGCGTACCAATGAAGTCGACCAAGCCAAGAGACTGCAATCTCACATGGAACACCACCTTTTCCAACCCCCTGATCCTTTTCTCCAGAATCAGCTACTTCATTTGTATGCTAAATTTGGGAAAGTTCGAGATGCCCAAAACCTGTTTGATAAAATGCTCGAGAGGGATGTTTTCTCCTGGAATGCGCTGCTCTCTGCGTATGCTAAATCGGGGTCTATCCAGAATTTGCAGGCGACATTTGATCGAATGCCTTTCCGGGATTCGGTTTCATACAATACGACGATTGCTGGGTTTGCTGGAAATGGTTGTCCAAAAGAGTCGCTCGAGCTTTTTAGGAGAATGCAGAGTGAAGGTTTTGTGCCTACGGAGTATACGAATGTGAGTGCATTGAATGCGGCTGCGCAGTTGGTGGATTTGAGGCGTGGGAAAGAAATTCATGGGAGTGTTATTGTGCATAAATTTTTAGGGAATACGTTCATCTGGAATGCTTTAACAGACATGTATGCTAAATGTGGTGAGATTGAACAGGCAAGGTGGCTGTTTGATCATCTTGCTAACAAGAATTTGATTTCTTGGAACTTGATGATATCTGGGTATGTGAAGAATGGACAGCCTGAGAAGTGCATTGGCCTGTTACATGAAATGCAGATGTCTGGTCACATGCCTGATCAAAGTAGGAAAAGGTTGGATTCTGATAATTTGTACTGCAATCAGAAAGAGTTCCATGGTTTGGTGGTAATTATCTTCGTACTTTGTGCTGCAGAACCACGTGCTGGAAACTTGGCTGCTAATTGA

Coding sequence (CDS)

ATGCAAGCAAAACCCAAGCTGCGGCAAGCCATAGACTTGCTCTGCTCTCGGGGCAGCGCTTCCTCTGAGGCATACACCCACTTGATCCTCGAATGCGTGCGTACCAATGAAGTCGACCAAGCCAAGAGACTGCAATCTCACATGGAACACCACCTTTTCCAACCCCCTGATCCTTTTCTCCAGAATCAGCTACTTCATTTGTATGCTAAATTTGGGAAAGTTCGAGATGCCCAAAACCTGTTTGATAAAATGCTCGAGAGGGATGTTTTCTCCTGGAATGCGCTGCTCTCTGCGTATGCTAAATCGGGGTCTATCCAGAATTTGCAGGCGACATTTGATCGAATGCCTTTCCGGGATTCGGTTTCATACAATACGACGATTGCTGGGTTTGCTGGAAATGGTTGTCCAAAAGAGTCGCTCGAGCTTTTTAGGAGAATGCAGAGTGAAGGTTTTGTGCCTACGGAGTATACGAATGTGAGTGCATTGAATGCGGCTGCGCAGTTGGTGGATTTGAGGCGTGGGAAAGAAATTCATGGGAGTGTTATTGTGCATAAATTTTTAGGGAATACGTTCATCTGGAATGCTTTAACAGACATGTATGCTAAATGTGGTGAGATTGAACAGGCAAGGTGGCTGTTTGATCATCTTGCTAACAAGAATTTGATTTCTTGGAACTTGATGATATCTGGGTATGTGAAGAATGGACAGCCTGAGAAGTGCATTGGCCTGTTACATGAAATGCAGATGTCTGGTCACATGCCTGATCAAAGTAGGAAAAGGTTGGATTCTGATAATTTGTACTGCAATCAGAAAGAGTTCCATGGTTTGGTGGTAATTATCTTCGTACTTTGTGCTGCAGAACCACGTGCTGGAAACTTGGCTGCTAATTGA

Protein sequence

MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFLQNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDSVSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGSVIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKCIGLLHEMQMSGHMPDQSRKRLDSDNLYCNQKEFHGLVVIIFVLCAAEPRAGNLAAN

Homology

[Close]

BLAST of MS024635 vs. NCBI nr
Match: XP_022145099.1 (pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia] >XP_022145100.1 pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia])

HSP 1 Score: 528.9 bits (1361), Expect = 2.9e-146
Identity = 255/256 (99.61%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL 60
           MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL
Sbjct: 1   MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL 60

Query: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120
           QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS
Sbjct: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120

Query: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGS 180
           VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQL+DLRRGKEIHGS
Sbjct: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLLDLRRGKEIHGS 180

Query: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240
           VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC
Sbjct: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240

Query: 241 IGLLHEMQMSGHMPDQ 257
           IGLLHEMQMSGHMPDQ
Sbjct: 241 IGLLHEMQMSGHMPDQ 256

[Close]

BLAST of MS024635 vs. NCBI nr
Match: XP_022960689.1 (pentatricopeptide repeat-containing protein At4g02750-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 466.5 bits (1199), Expect = 1.8e-127
Identity = 220/256 (85.94%), Postives = 239/256 (93.36%), Query Frame = 0


Query: 1   MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL 60
           M+AK KLRQA+DLLCSR +A+SEAYT L+LECVR NE+DQAKRLQSHMEHHLFQPPDPFL
Sbjct: 1   MKAKSKLRQAVDLLCSRSTATSEAYTQLVLECVRANEIDQAKRLQSHMEHHLFQPPDPFL 60

Query: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120
            NQLLHLYAKFGK+RDAQNLFDKMLERDVFSWNALLSAYAKSGSIQ+L+ATFDRMP+RDS
Sbjct: 61  HNQLLHLYAKFGKLRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQDLRATFDRMPYRDS 120

Query: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGS 180
           VSYNT IAG +GN  PKESLELFRRMQ EG  PTEYTNVSALNA+AQL+DLRRGK+IHGS
Sbjct: 121 VSYNTIIAGLSGNSFPKESLELFRRMQREGLAPTEYTNVSALNASAQLLDLRRGKQIHGS 180

Query: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240
           VIVH +LGN FI NALTDMYAKCGEIEQARWLFD L NKNL+SWNLMISGYVKNGQPEKC
Sbjct: 181 VIVHNYLGNVFICNALTDMYAKCGEIEQARWLFDRLTNKNLVSWNLMISGYVKNGQPEKC 240

Query: 241 IGLLHEMQMSGHMPDQ 257
           IGLLH+M++SGHMPDQ
Sbjct: 241 IGLLHDMRLSGHMPDQ 256

[Close]

BLAST of MS024635 vs. NCBI nr
Match: KAG6589945.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 466.5 bits (1199), Expect = 1.8e-127
Identity = 220/256 (85.94%), Postives = 239/256 (93.36%), Query Frame = 0


Query: 1   MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL 60
           M+AK KLRQA+DLLCSR +A+SEAYT L+LECVR NE+DQAKRLQSHMEHHLFQPPDPFL
Sbjct: 1   MKAKSKLRQAVDLLCSRSTATSEAYTQLVLECVRANEIDQAKRLQSHMEHHLFQPPDPFL 60

Query: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120
            NQLLHLYAKFGK+RDAQNLFDKMLERDVFSWNALLSAYAKSGSIQ+L+ATFDRMP+RDS
Sbjct: 61  HNQLLHLYAKFGKLRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQDLRATFDRMPYRDS 120

Query: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGS 180
           VSYNT IAG +GN  PKESLELFRRMQ EG  PTEYTNVSALNA+AQL+DLRRGK+IHGS
Sbjct: 121 VSYNTIIAGLSGNSFPKESLELFRRMQREGLAPTEYTNVSALNASAQLLDLRRGKQIHGS 180

Query: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240
           VIVH +LGN FI NALTDMYAKCGEIEQARWLFD L NKNL+SWNLMISGYVKNGQPEKC
Sbjct: 181 VIVHNYLGNVFICNALTDMYAKCGEIEQARWLFDRLTNKNLVSWNLMISGYVKNGQPEKC 240

Query: 241 IGLLHEMQMSGHMPDQ 257
           IGLLH+M++SGHMPDQ
Sbjct: 241 IGLLHDMRLSGHMPDQ 256

[Close]

BLAST of MS024635 vs. NCBI nr
Match: KAG7023609.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 466.5 bits (1199), Expect = 1.8e-127
Identity = 220/256 (85.94%), Postives = 239/256 (93.36%), Query Frame = 0


Query: 1   MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL 60
           M+AK KLRQA+DLLCSR +A+SEAYT L+LECVR NE+DQAKRLQSHMEHHLFQPPDPFL
Sbjct: 1   MKAKSKLRQAVDLLCSRSTATSEAYTQLVLECVRANEIDQAKRLQSHMEHHLFQPPDPFL 60

Query: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120
            NQLLHLYAKFGK+RDAQNLFDKMLERDVFSWNALLSAYAKSGSIQ+L+ATFDRMP+RDS
Sbjct: 61  HNQLLHLYAKFGKLRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQDLRATFDRMPYRDS 120

Query: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGS 180
           VSYNT IAG +GN  PKESLELFRRMQ EG  PTEYTNVSALNA+AQL+DLRRGK+IHGS
Sbjct: 121 VSYNTIIAGLSGNSFPKESLELFRRMQREGLAPTEYTNVSALNASAQLLDLRRGKQIHGS 180

Query: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240
           VIVH +LGN FI NALTDMYAKCGEIEQARWLFD L NKNL+SWNLMISGYVKNGQPEKC
Sbjct: 181 VIVHNYLGNVFICNALTDMYAKCGEIEQARWLFDRLTNKNLVSWNLMISGYVKNGQPEKC 240

Query: 241 IGLLHEMQMSGHMPDQ 257
           IGLLH+M++SGHMPDQ
Sbjct: 241 IGLLHDMRLSGHMPDQ 256

[Close]

BLAST of MS024635 vs. NCBI nr
Match: XP_022960690.1 (pentatricopeptide repeat-containing protein At2g13600-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 466.5 bits (1199), Expect = 1.8e-127
Identity = 220/256 (85.94%), Postives = 239/256 (93.36%), Query Frame = 0


Query: 1   MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL 60
           M+AK KLRQA+DLLCSR +A+SEAYT L+LECVR NE+DQAKRLQSHMEHHLFQPPDPFL
Sbjct: 1   MKAKSKLRQAVDLLCSRSTATSEAYTQLVLECVRANEIDQAKRLQSHMEHHLFQPPDPFL 60

Query: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120
            NQLLHLYAKFGK+RDAQNLFDKMLERDVFSWNALLSAYAKSGSIQ+L+ATFDRMP+RDS
Sbjct: 61  HNQLLHLYAKFGKLRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQDLRATFDRMPYRDS 120

Query: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGS 180
           VSYNT IAG +GN  PKESLELFRRMQ EG  PTEYTNVSALNA+AQL+DLRRGK+IHGS
Sbjct: 121 VSYNTIIAGLSGNSFPKESLELFRRMQREGLAPTEYTNVSALNASAQLLDLRRGKQIHGS 180

Query: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240
           VIVH +LGN FI NALTDMYAKCGEIEQARWLFD L NKNL+SWNLMISGYVKNGQPEKC
Sbjct: 181 VIVHNYLGNVFICNALTDMYAKCGEIEQARWLFDRLTNKNLVSWNLMISGYVKNGQPEKC 240

Query: 241 IGLLHEMQMSGHMPDQ 257
           IGLLH+M++SGHMPDQ
Sbjct: 241 IGLLHDMRLSGHMPDQ 256

[Close]

BLAST of MS024635 vs. ExPASy Swiss-Prot
Match: O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.3e-39
Identity = 85/251 (33.86%), Postives = 141/251 (56.18%), Query Frame = 0


Query: 7   LRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFLQNQLLH 66
           LR+A+ LL       +  Y +LI  C +T  +++ K++  H+    F  P   + N+LL 
Sbjct: 70  LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF-VPGIVIWNRLLR 129

Query: 67  LYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDSVSYNTT 126
           +YAK G + DA+ +FD+M  RD+ SWN +++ YA+ G ++  +  FD M  +DS S+   
Sbjct: 130 MYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAM 189

Query: 127 IAGFAGNGCPKESLELFRRMQS-EGFVPTEYTNVSALNAAAQLVDLRRGKEIHGSVIVHK 186
           + G+     P+E+L L+  MQ      P  +T   A+ AAA +  +RRGKEIHG ++   
Sbjct: 190 VTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAG 249

Query: 187 FLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKCIGLLH 246
              +  +W++L DMY KCG I++AR +FD +  K+++SW  MI  Y K+ +  +   L  
Sbjct: 250 LDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFS 309

Query: 247 EMQMSGHMPDQ 257
           E+  S   P++
Sbjct: 310 ELVGSCERPNE 319

[Close]

BLAST of MS024635 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.3e-39
Identity = 84/235 (35.74%), Postives = 132/235 (56.17%), Query Frame = 0


Query: 21  SSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFLQNQLLHLYAKFGKVRDAQNL 80
           +S  +  ++  C ++    + +++  H+   L    D ++   L+ +Y + G++ DA  +
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHV-LKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 192

Query: 81  FDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDSVSYNTTIAGFAGNGCPKESL 140
           FDK   RDV S+ AL+  YA  G I+N Q  FD +P +D VS+N  I+G+A  G  KE+L
Sbjct: 193 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 252

Query: 141 ELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGSVIVHKFLGNTFIWNALTDMY 200
           ELF+ M      P E T V+ ++A AQ   +  G+++H  +  H F  N  I NAL D+Y
Sbjct: 253 ELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 312

Query: 201 AKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKCIGLLHEMQMSGHMPD 256
           +KCGE+E A  LF+ L  K++ISWN +I GY      ++ + L  EM  SG  P+
Sbjct: 313 SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 366

[Close]

BLAST of MS024635 vs. ExPASy Swiss-Prot
Match: Q9SJG6 (Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E75 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 7.8e-38
Identity = 88/247 (35.63%), Postives = 134/247 (54.25%), Query Frame = 0


Query: 11  IDLLCSRGSASSE--AYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFLQNQLLHLY 70
           ID+LCS  S   +   Y  +     R  +    ++L   +     +  D F++N +LH+Y
Sbjct: 113 IDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLE-DDSFIRNTMLHMY 172

Query: 71  AKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDSVSYNTTIA 130
              G + +A  +F  M+  DV +WN+++  +AK G I   Q  FD MP R+ VS+N+ I+
Sbjct: 173 VTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMIS 232

Query: 131 GFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGSVIVHKFLG 190
           GF  NG  K++L++FR MQ +   P  +T VS LNA A L    +G+ IH  ++ ++F  
Sbjct: 233 GFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFEL 292

Query: 191 NTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKCIGLLHEMQ 250
           N+ +  AL DMY KCG IE+   +F+    K L  WN MI G   NG  E+ + L  E++
Sbjct: 293 NSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELE 352

Query: 251 MSGHMPD 256
            SG  PD
Sbjct: 353 RSGLEPD 358

[Close]

BLAST of MS024635 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.3e-37
Identity = 81/195 (41.54%), Postives = 113/195 (57.95%), Query Frame = 0


Query: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120
           +N L+ +Y KF  + DA  +FD+M ERDV SWN+LLS YA+ G ++  +  F  M  +  
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206

Query: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGS 180
           VS+   I+G+ G GC  E+++ FR MQ  G  P E + +S L + AQL  L  GK IH  
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266

Query: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240
                FL  T + NAL +MY+KCG I QA  LF  +  K++ISW+ MISGY  +G     
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 326

Query: 241 IGLLHEMQMSGHMPD 256
           I   +EMQ +   P+
Sbjct: 327 IETFNEMQRAKVKPN 341

[Close]

BLAST of MS024635 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.1e-37
Identity = 68/198 (34.34%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 59  FLQNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFR 118
           F+QN+L+  Y+K G + D + +FDKM +R++++WN++++   K G +    + F  MP R
Sbjct: 56  FIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPER 115

Query: 119 DSVSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIH 178
           D  ++N+ ++GFA +   +E+L  F  M  EGFV  EY+  S L+A + L D+ +G ++H
Sbjct: 116 DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH 175

Query: 179 GSVIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPE 238
             +    FL + +I +AL DMY+KCG +  A+ +FD + ++N++SWN +I+ + +NG   
Sbjct: 176 SLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAV 235

Query: 239 KCIGLLHEMQMSGHMPDQ 257
           + + +   M  S   PD+
Sbjct: 236 EALDVFQMMLESRVEPDE 253

[Close]

BLAST of MS024635 vs. ExPASy TrEMBL
Match: A0A6J1CU81 (pentatricopeptide repeat-containing protein At4g02750-like OS=Momordica charantia OX=3673 GN=LOC111014606 PE=3 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.4e-146
Identity = 255/256 (99.61%), Postives = 256/256 (100.00%), Query Frame = 0


Query: 1   MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL 60
           MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL
Sbjct: 1   MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL 60

Query: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120
           QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS
Sbjct: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120

Query: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGS 180
           VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQL+DLRRGKEIHGS
Sbjct: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLLDLRRGKEIHGS 180

Query: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240
           VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC
Sbjct: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240

Query: 241 IGLLHEMQMSGHMPDQ 257
           IGLLHEMQMSGHMPDQ
Sbjct: 241 IGLLHEMQMSGHMPDQ 256

[Close]

BLAST of MS024635 vs. ExPASy TrEMBL
Match: A0A6J1HBT0 (pentatricopeptide repeat-containing protein At4g02750-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461409 PE=3 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 8.5e-128
Identity = 220/256 (85.94%), Postives = 239/256 (93.36%), Query Frame = 0


Query: 1   MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL 60
           M+AK KLRQA+DLLCSR +A+SEAYT L+LECVR NE+DQAKRLQSHMEHHLFQPPDPFL
Sbjct: 1   MKAKSKLRQAVDLLCSRSTATSEAYTQLVLECVRANEIDQAKRLQSHMEHHLFQPPDPFL 60

Query: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120
            NQLLHLYAKFGK+RDAQNLFDKMLERDVFSWNALLSAYAKSGSIQ+L+ATFDRMP+RDS
Sbjct: 61  HNQLLHLYAKFGKLRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQDLRATFDRMPYRDS 120

Query: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGS 180
           VSYNT IAG +GN  PKESLELFRRMQ EG  PTEYTNVSALNA+AQL+DLRRGK+IHGS
Sbjct: 121 VSYNTIIAGLSGNSFPKESLELFRRMQREGLAPTEYTNVSALNASAQLLDLRRGKQIHGS 180

Query: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240
           VIVH +LGN FI NALTDMYAKCGEIEQARWLFD L NKNL+SWNLMISGYVKNGQPEKC
Sbjct: 181 VIVHNYLGNVFICNALTDMYAKCGEIEQARWLFDRLTNKNLVSWNLMISGYVKNGQPEKC 240

Query: 241 IGLLHEMQMSGHMPDQ 257
           IGLLH+M++SGHMPDQ
Sbjct: 241 IGLLHDMRLSGHMPDQ 256

[Close]

BLAST of MS024635 vs. ExPASy TrEMBL
Match: A0A6J1H9T7 (pentatricopeptide repeat-containing protein At2g13600-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461409 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 8.5e-128
Identity = 220/256 (85.94%), Postives = 239/256 (93.36%), Query Frame = 0


Query: 1   MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL 60
           M+AK KLRQA+DLLCSR +A+SEAYT L+LECVR NE+DQAKRLQSHMEHHLFQPPDPFL
Sbjct: 1   MKAKSKLRQAVDLLCSRSTATSEAYTQLVLECVRANEIDQAKRLQSHMEHHLFQPPDPFL 60

Query: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120
            NQLLHLYAKFGK+RDAQNLFDKMLERDVFSWNALLSAYAKSGSIQ+L+ATFDRMP+RDS
Sbjct: 61  HNQLLHLYAKFGKLRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQDLRATFDRMPYRDS 120

Query: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGS 180
           VSYNT IAG +GN  PKESLELFRRMQ EG  PTEYTNVSALNA+AQL+DLRRGK+IHGS
Sbjct: 121 VSYNTIIAGLSGNSFPKESLELFRRMQREGLAPTEYTNVSALNASAQLLDLRRGKQIHGS 180

Query: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240
           VIVH +LGN FI NALTDMYAKCGEIEQARWLFD L NKNL+SWNLMISGYVKNGQPEKC
Sbjct: 181 VIVHNYLGNVFICNALTDMYAKCGEIEQARWLFDRLTNKNLVSWNLMISGYVKNGQPEKC 240

Query: 241 IGLLHEMQMSGHMPDQ 257
           IGLLH+M++SGHMPDQ
Sbjct: 241 IGLLHDMRLSGHMPDQ 256

[Close]

BLAST of MS024635 vs. ExPASy TrEMBL
Match: A0A6J1JK08 (putative pentatricopeptide repeat-containing protein At1g68930 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485131 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.1e-126
Identity = 219/256 (85.55%), Postives = 237/256 (92.58%), Query Frame = 0


Query: 1   MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL 60
           M+AK KLRQA+ LLCSR +A+SEAYT L+LECVR NE+DQAKRLQSHMEHHLFQPPDPFL
Sbjct: 1   MKAKSKLRQAVALLCSRSTATSEAYTQLVLECVRANEIDQAKRLQSHMEHHLFQPPDPFL 60

Query: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120
            NQLLHLYAKFGK+RDAQNLFDKMLERDVFSWNALLSAYAKSGSIQ+L+ATFDRMP+RDS
Sbjct: 61  HNQLLHLYAKFGKLRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQDLRATFDRMPYRDS 120

Query: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGS 180
           VSYNT IAG +GN  PKESLELFRRMQ EG  PTEYTNVSALNA+AQL+DLRRGK+IHGS
Sbjct: 121 VSYNTIIAGLSGNSFPKESLELFRRMQREGLEPTEYTNVSALNASAQLLDLRRGKQIHGS 180

Query: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240
           VIVH +LGN FI NALTDMYAKCGEIE ARWLFD L NKNL+SWNLMISGYVKNGQPEKC
Sbjct: 181 VIVHNYLGNVFICNALTDMYAKCGEIEHARWLFDRLTNKNLVSWNLMISGYVKNGQPEKC 240

Query: 241 IGLLHEMQMSGHMPDQ 257
           IGLLHEM++SGHMPDQ
Sbjct: 241 IGLLHEMRLSGHMPDQ 256

[Close]

BLAST of MS024635 vs. ExPASy TrEMBL
Match: A0A6J1JAW4 (pentatricopeptide repeat-containing protein At4g02750-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485131 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.1e-126
Identity = 219/256 (85.55%), Postives = 237/256 (92.58%), Query Frame = 0


Query: 1   MQAKPKLRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFL 60
           M+AK KLRQA+ LLCSR +A+SEAYT L+LECVR NE+DQAKRLQSHMEHHLFQPPDPFL
Sbjct: 1   MKAKSKLRQAVALLCSRSTATSEAYTQLVLECVRANEIDQAKRLQSHMEHHLFQPPDPFL 60

Query: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120
            NQLLHLYAKFGK+RDAQNLFDKMLERDVFSWNALLSAYAKSGSIQ+L+ATFDRMP+RDS
Sbjct: 61  HNQLLHLYAKFGKLRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQDLRATFDRMPYRDS 120

Query: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGS 180
           VSYNT IAG +GN  PKESLELFRRMQ EG  PTEYTNVSALNA+AQL+DLRRGK+IHGS
Sbjct: 121 VSYNTIIAGLSGNSFPKESLELFRRMQREGLEPTEYTNVSALNASAQLLDLRRGKQIHGS 180

Query: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240
           VIVH +LGN FI NALTDMYAKCGEIE ARWLFD L NKNL+SWNLMISGYVKNGQPEKC
Sbjct: 181 VIVHNYLGNVFICNALTDMYAKCGEIEHARWLFDRLTNKNLVSWNLMISGYVKNGQPEKC 240

Query: 241 IGLLHEMQMSGHMPDQ 257
           IGLLHEM++SGHMPDQ
Sbjct: 241 IGLLHEMRLSGHMPDQ 256

[Close]

BLAST of MS024635 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 6.6e-40
Identity = 84/235 (35.74%), Postives = 132/235 (56.17%), Query Frame = 0


Query: 21  SSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFLQNQLLHLYAKFGKVRDAQNL 80
           +S  +  ++  C ++    + +++  H+   L    D ++   L+ +Y + G++ DA  +
Sbjct: 133 NSYTFPFVLKSCAKSKAFKEGQQIHGHV-LKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 192

Query: 81  FDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDSVSYNTTIAGFAGNGCPKESL 140
           FDK   RDV S+ AL+  YA  G I+N Q  FD +P +D VS+N  I+G+A  G  KE+L
Sbjct: 193 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 252

Query: 141 ELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGSVIVHKFLGNTFIWNALTDMY 200
           ELF+ M      P E T V+ ++A AQ   +  G+++H  +  H F  N  I NAL D+Y
Sbjct: 253 ELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLY 312

Query: 201 AKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKCIGLLHEMQMSGHMPD 256
           +KCGE+E A  LF+ L  K++ISWN +I GY      ++ + L  EM  SG  P+
Sbjct: 313 SKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPN 366

[Close]

BLAST of MS024635 vs. TAIR 10
Match: AT4G37170.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 6.6e-40
Identity = 85/251 (33.86%), Postives = 141/251 (56.18%), Query Frame = 0


Query: 7   LRQAIDLLCSRGSASSEAYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFLQNQLLH 66
           LR+A+ LL       +  Y +LI  C +T  +++ K++  H+    F  P   + N+LL 
Sbjct: 70  LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGF-VPGIVIWNRLLR 129

Query: 67  LYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDSVSYNTT 126
           +YAK G + DA+ +FD+M  RD+ SWN +++ YA+ G ++  +  FD M  +DS S+   
Sbjct: 130 MYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAM 189

Query: 127 IAGFAGNGCPKESLELFRRMQS-EGFVPTEYTNVSALNAAAQLVDLRRGKEIHGSVIVHK 186
           + G+     P+E+L L+  MQ      P  +T   A+ AAA +  +RRGKEIHG ++   
Sbjct: 190 VTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAG 249

Query: 187 FLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKCIGLLH 246
              +  +W++L DMY KCG I++AR +FD +  K+++SW  MI  Y K+ +  +   L  
Sbjct: 250 LDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFS 309

Query: 247 EMQMSGHMPDQ 257
           E+  S   P++
Sbjct: 310 ELVGSCERPNE 319

[Close]

BLAST of MS024635 vs. TAIR 10
Match: AT2G42920.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 5.6e-39
Identity = 88/247 (35.63%), Postives = 134/247 (54.25%), Query Frame = 0


Query: 11  IDLLCSRGSASSE--AYTHLILECVRTNEVDQAKRLQSHMEHHLFQPPDPFLQNQLLHLY 70
           ID+LCS  S   +   Y  +     R  +    ++L   +     +  D F++N +LH+Y
Sbjct: 113 IDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLE-DDSFIRNTMLHMY 172

Query: 71  AKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDSVSYNTTIA 130
              G + +A  +F  M+  DV +WN+++  +AK G I   Q  FD MP R+ VS+N+ I+
Sbjct: 173 VTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMIS 232

Query: 131 GFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGSVIVHKFLG 190
           GF  NG  K++L++FR MQ +   P  +T VS LNA A L    +G+ IH  ++ ++F  
Sbjct: 233 GFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFEL 292

Query: 191 NTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKCIGLLHEMQ 250
           N+ +  AL DMY KCG IE+   +F+    K L  WN MI G   NG  E+ + L  E++
Sbjct: 293 NSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELE 352

Query: 251 MSGHMPD 256
            SG  PD
Sbjct: 353 RSGLEPD 358

[Close]

BLAST of MS024635 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 157.5 bits (397), Expect = 1.6e-38
Identity = 81/195 (41.54%), Postives = 113/195 (57.95%), Query Frame = 0


Query: 61  QNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFRDS 120
           +N L+ +Y KF  + DA  +FD+M ERDV SWN+LLS YA+ G ++  +  F  M  +  
Sbjct: 147 ENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI 206

Query: 121 VSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIHGS 180
           VS+   I+G+ G GC  E+++ FR MQ  G  P E + +S L + AQL  L  GK IH  
Sbjct: 207 VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLY 266

Query: 181 VIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPEKC 240
                FL  T + NAL +MY+KCG I QA  LF  +  K++ISW+ MISGY  +G     
Sbjct: 267 AERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGA 326

Query: 241 IGLLHEMQMSGHMPD 256
           I   +EMQ +   P+
Sbjct: 327 IETFNEMQRAKVKPN 341

[Close]

BLAST of MS024635 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 3.6e-38
Identity = 68/198 (34.34%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 59  FLQNQLLHLYAKFGKVRDAQNLFDKMLERDVFSWNALLSAYAKSGSIQNLQATFDRMPFR 118
           F+QN+L+  Y+K G + D + +FDKM +R++++WN++++   K G +    + F  MP R
Sbjct: 56  FIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPER 115

Query: 119 DSVSYNTTIAGFAGNGCPKESLELFRRMQSEGFVPTEYTNVSALNAAAQLVDLRRGKEIH 178
           D  ++N+ ++GFA +   +E+L  F  M  EGFV  EY+  S L+A + L D+ +G ++H
Sbjct: 116 DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVH 175

Query: 179 GSVIVHKFLGNTFIWNALTDMYAKCGEIEQARWLFDHLANKNLISWNLMISGYVKNGQPE 238
             +    FL + +I +AL DMY+KCG +  A+ +FD + ++N++SWN +I+ + +NG   
Sbjct: 176 SLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAV 235

Query: 239 KCIGLLHEMQMSGHMPDQ 257
           + + +   M  S   PD+
Sbjct: 236 EALDVFQMMLESRVEPDE 253

The following BLAST results are available for this feature:

BLAST of MS024635 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145099.1	2.9e-146	99.61	pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia]...	[more]
XP_022960689.1	1.8e-127	85.94	pentatricopeptide repeat-containing protein At4g02750-like isoform X1 [Cucurbita...	[more]
KAG6589945.1	1.8e-127	85.94	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG7023609.1	1.8e-127	85.94	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022960690.1	1.8e-127	85.94	pentatricopeptide repeat-containing protein At2g13600-like isoform X2 [Cucurbita...	[more]

BLAST of MS024635 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23169	9.3e-39	33.86	Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	9.3e-39	35.74	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SJG6	7.8e-38	35.63	Pentatricopeptide repeat-containing protein At2g42920, chloroplastic OS=Arabidop...	[more]
Q9SIL5	2.3e-37	41.54	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]
Q9SIT7	5.1e-37	34.34	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]

BLAST of MS024635 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CU81	1.4e-146	99.61	pentatricopeptide repeat-containing protein At4g02750-like OS=Momordica charanti...	[more]
A0A6J1HBT0	8.5e-128	85.94	pentatricopeptide repeat-containing protein At4g02750-like isoform X1 OS=Cucurbi...	[more]
A0A6J1H9T7	8.5e-128	85.94	pentatricopeptide repeat-containing protein At2g13600-like isoform X2 OS=Cucurbi...	[more]
A0A6J1JK08	2.1e-126	85.55	putative pentatricopeptide repeat-containing protein At1g68930 isoform X2 OS=Cuc...	[more]
A0A6J1JAW4	2.1e-126	85.55	pentatricopeptide repeat-containing protein At4g02750-like isoform X1 OS=Cucurbi...	[more]

BLAST of MS024635 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08070.1	6.6e-40	35.74	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G37170.1	6.6e-40	33.86	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G42920.1	5.6e-39	35.63	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT2G20540.1	1.6e-38	41.54	mitochondrial editing factor 21	[more]
AT2G13600.1	3.6e-38	34.34	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 174..262 e-value: 3.0E-18 score: 67.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 20..173 e-value: 4.7E-30 score: 107.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 43..223
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 90..115 e-value: 0.0096 score: 16.1 coord: 192..217 e-value: 0.0021 score: 18.2 coord: 62..88 e-value: 3.8E-4 score: 20.5 coord: 222..251 e-value: 1.4E-9 score: 37.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 119..164 e-value: 1.0E-7 score: 32.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 222..255 e-value: 2.0E-9 score: 35.0 coord: 121..155 e-value: 2.9E-7 score: 28.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 220..254 score: 12.079411
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 57..91 score: 9.646002
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 189..219 score: 9.010246
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 119..153 score: 12.298636
None	No IPR available	PANTHER	PTHR47929	FAMILY NOT NAMED	coord: 24..115 coord: 93..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS024635.1	MS024635.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding