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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAATCCATCAGATTTTTGCAGCTCATTGCCTGTGTATTATTGTTACTCTTTCATGGCTGGTTCCTTGTCGGCGGCGGCGGCCAGAGCGACAGGAAAGTTTCGATCTCCGGGAAGGGGGACGACATGTCGTATTTACACCGCCACCGGGTTGCCGCCGGAGACCCGTGGTGGCCGACAAGAACCGAGATCGTCGGTCGACGGTACGGTTACGATTACGAAACTGACAAACACATCGTTCCGAGTGGTCCAAATCCTCTGCATCACTAA mRNA sequence ATGAAATCCATCAGATTTTTGCAGCTCATTGCCTGTGTATTATTGTTACTCTTTCATGGCTGGTTCCTTGTCGGCGGCGGCGGCCAGAGCGACAGGAAAGTTTCGATCTCCGGGAAGGGGGACGACATGTCGTATTTACACCGCCACCGGGTTGCCGCCGGAGACCCGTGGTGGCCGACAAGAACCGAGATCGTCGGTCGACGGTACGGTTACGATTACGAAACTGACAAACACATCGTTCCGAGTGGTCCAAATCCTCTGCATCACTAA Coding sequence (CDS) ATGAAATCCATCAGATTTTTGCAGCTCATTGCCTGTGTATTATTGTTACTCTTTCATGGCTGGTTCCTTGTCGGCGGCGGCGGCCAGAGCGACAGGAAAGTTTCGATCTCCGGGAAGGGGGACGACATGTCGTATTTACACCGCCACCGGGTTGCCGCCGGAGACCCGTGGTGGCCGACAAGAACCGAGATCGTCGGTCGACGGTACGGTTACGATTACGAAACTGACAAACACATCGTTCCGAGTGGTCCAAATCCTCTGCATCACTAA Protein sequence MKSIRFLQLIACVLLLLFHGWFLVGGGGQSDRKVSISGKGDDMSYLHRHRVAAGDPWWPTRTEIVGRRYGYDYETDKHIVPSGPNPLHH
Homology
BLAST of MS024621 vs. NCBI nr
Match: KYP55648.1 (hypothetical protein KK1_001870 [Cajanus cajan]) HSP 1 Score: 56.2 bits (134), Expect = 1.6e-04 Identity = 40/109 (36.70%), Postives = 53/109 (48.62%), Query Frame = 0
Query: 4 IRFLQLIACVL-----LLLFHGWF---------LVGGGGQSDRKVSISGKGDDMS-YLHR 63
IRF L++ +L LLFHGWF L+ +RK+ +G G D + +LHR
Sbjct: 5 IRFQHLLSFILWLFLFSLLFHGWFAFKSNNHNALISNNMSPNRKILATGPGFDFTPFLHR 64
Query: 64 HRVAAGDPW--------WPTRTEIVGRRYGYDYETDKHIVPSGPNPLHH 90
HR P P +TEI R Y +K +VP+GPNPLHH
Sbjct: 65 HRHHHHHPRHHHRSHMPQPNQTEIDPR-----YGVEKRLVPTGPNPLHH 108
BLAST of MS024621 vs. ExPASy TrEMBL
Match: A0A151SLI2 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_001870 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 8.0e-05 Identity = 40/109 (36.70%), Postives = 53/109 (48.62%), Query Frame = 0
Query: 4 IRFLQLIACVL-----LLLFHGWF---------LVGGGGQSDRKVSISGKGDDMS-YLHR 63
IRF L++ +L LLFHGWF L+ +RK+ +G G D + +LHR
Sbjct: 5 IRFQHLLSFILWLFLFSLLFHGWFAFKSNNHNALISNNMSPNRKILATGPGFDFTPFLHR 64
Query: 64 HRVAAGDPW--------WPTRTEIVGRRYGYDYETDKHIVPSGPNPLHH 90
HR P P +TEI R Y +K +VP+GPNPLHH
Sbjct: 65 HRHHHHHPRHHHRSHMPQPNQTEIDPR-----YGVEKRLVPTGPNPLHH 108
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KYP55648.1 | 1.6e-04 | 36.70 | hypothetical protein KK1_001870 [Cajanus cajan] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A151SLI2 | 8.0e-05 | 36.70 | Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_001870 PE=3 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
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| MS024621.1 | MS024621.1 | mRNA |
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