MS023120 (gene) Bitter gourd (TR) v1

Overview


Name	MS023120
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein ELF4-LIKE
Location	scaffold78: 295313 .. 295654 (-)
RNA-Seq Expression	MS023120
Synteny	MS023120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGTGACACATTTTCAGGGCTTGGCAGTGGTGCCCAGATTGATGGCAAGATTTTACAGAGATTTCAGAAGAATTTTGTTCAAGTCCAAAGCATATTGGATCAAAACAAGCTGCTCATCAGTGAAATAAACCAAAACCACGAGTCAAAGATCCCTGACAACCTCAACAGAAATGTGGGTCTGATCCGAGAACTAAACAACAATATCAGGAGGGTTGTTGACTTATATGCTGATCTTTCATATAACTTCACCAGATCCGTGGAAGTTTCTTCAGAAGGCGATTCCAGTGGAGCTTTGAAGTCAGATGGAAAAGCAGGCCAGAAGAGAAACAGGGTTGTT

mRNA sequence

ATGGAGGGTGACACATTTTCAGGGCTTGGCAGTGGTGCCCAGATTGATGGCAAGATTTTACAGAGATTTCAGAAGAATTTTGTTCAAGTCCAAAGCATATTGGATCAAAACAAGCTGCTCATCAGTGAAATAAACCAAAACCACGAGTCAAAGATCCCTGACAACCTCAACAGAAATGTGGGTCTGATCCGAGAACTAAACAACAATATCAGGAGGGTTGTTGACTTATATGCTGATCTTTCATATAACTTCACCAGATCCGTGGAAGTTTCTTCAGAAGGCGATTCCAGTGGAGCTTTGAAGTCAGATGGAAAAGCAGGCCAGAAGAGAAACAGGGTTGTT

Coding sequence (CDS)

ATGGAGGGTGACACATTTTCAGGGCTTGGCAGTGGTGCCCAGATTGATGGCAAGATTTTACAGAGATTTCAGAAGAATTTTGTTCAAGTCCAAAGCATATTGGATCAAAACAAGCTGCTCATCAGTGAAATAAACCAAAACCACGAGTCAAAGATCCCTGACAACCTCAACAGAAATGTGGGTCTGATCCGAGAACTAAACAACAATATCAGGAGGGTTGTTGACTTATATGCTGATCTTTCATATAACTTCACCAGATCCGTGGAAGTTTCTTCAGAAGGCGATTCCAGTGGAGCTTTGAAGTCAGATGGAAAAGCAGGCCAGAAGAGAAACAGGGTTGTT

Protein sequence

MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNRVV

Homology

[Close]

BLAST of MS023120 vs. NCBI nr
Match: XP_022147541.1 (protein ELF4-LIKE 4 [Momordica charantia])

HSP 1 Score: 218.4 bits (555), Expect = 3.2e-53
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNRVV 115
           GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNRVV
Sbjct: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNRVV 114

[Close]

BLAST of MS023120 vs. NCBI nr
Match: XP_022961237.1 (protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022961238.1 protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022961239.1 protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022987288.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_022987289.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_022987290.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_023516901.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023516902.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023516903.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >KAG6590027.1 Protein ELF4-LIKE 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023688.1 Protein ELF4-LIKE 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 199.1 bits (505), Expect = 2.0e-47
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSGLGS AQID KILQ FQKNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSSAQIDTKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNR 113
           GLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGALKSDGKAGQKRNR
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNR 112

[Close]

BLAST of MS023120 vs. NCBI nr
Match: XP_022933909.1 (protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022933910.1 protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022933911.1 protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022968596.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_022968604.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_022968613.1 protein ELF4-LIKE 4-like [Cucurbita maxima] >XP_023529215.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >XP_023529216.1 protein ELF4-LIKE 4-like [Cucurbita pepo subsp. pepo] >KAG6588067.1 Protein ELF4-LIKE 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.7 bits (504), Expect = 2.6e-47
Identity = 104/114 (91.23%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSG+GS AQID KILQ F KNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNRVV 115
           GLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGALKSDGKAGQKRNR V
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRAV 114

[Close]

BLAST of MS023120 vs. NCBI nr
Match: XP_004144022.1 (protein ELF4-LIKE 4 [Cucumis sativus] >XP_008450908.1 PREDICTED: protein ELF4-LIKE 4 [Cucumis melo] >XP_008450909.1 PREDICTED: protein ELF4-LIKE 4 [Cucumis melo] >XP_008450910.1 PREDICTED: protein ELF4-LIKE 4 [Cucumis melo] >XP_011660014.1 protein ELF4-LIKE 4 [Cucumis sativus] >XP_031736193.1 protein ELF4-LIKE 4 [Cucumis sativus] >XP_031736194.1 protein ELF4-LIKE 4 [Cucumis sativus] >XP_038878351.1 protein ELF4-LIKE 4 [Benincasa hispida] >XP_038878352.1 protein ELF4-LIKE 4 [Benincasa hispida] >KAA0055791.1 protein ELF4-LIKE 4-like isoform X2 [Cucumis melo var. makuwa] >KGN66281.1 hypothetical protein Csa_007334 [Cucumis sativus] >TYK10042.1 protein ELF4-LIKE 4-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 198.0 bits (502), Expect = 4.5e-47
Identity = 104/112 (92.86%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSGLGS  QID KILQ FQKNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSSPQIDSKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNR 113
           GLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGALKSDGKAGQKRNR
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNR 112

[Close]

BLAST of MS023120 vs. NCBI nr
Match: KAG7021961.1 (Protein ELF4-LIKE 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 103/112 (91.96%), Postives = 107/112 (95.54%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSG+GS AQID KILQ F KNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNR 113
           GLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGALKSDGKAGQKRNR
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNR 112

[Close]

BLAST of MS023120 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.0e-38
Identity = 82/112 (73.21%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGD  SG G    +DGK+LQ FQK+FV VQ ILDQN+LLI+EINQNHESK PDNL RNV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNR 113
           GLI+ELNNNIRRV  LY DLS++F RSV+ SSEG+SSG LKSDGKA QKR R
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFR 112

[Close]

BLAST of MS023120 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-36
Identity = 81/113 (71.68%), Postives = 93/113 (82.30%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGD +SG G   Q+DGK+LQ FQK+FVQVQ ILDQN+LLI+EINQNHESK  D+L RNV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKA-GQKRNR 113
           GLIRELNNNIR V  LY DLS++F RSV+ SSEG+S+G LKSDGKA  QKR R
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTGTLKSDGKANNQKRFR 117

[Close]

BLAST of MS023120 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.6e-34
Identity = 75/98 (76.53%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 1  MEGDTFSG-LGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRN 60
          MEGDT S  +GSG Q+DGKILQ F+K+FVQVQ+ILD N+LLI+EINQNHESKIPDNL RN
Sbjct: 1  MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 61 VGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSS 98
          VGLIRELNNN+RRV  LY DLS NF++S+E SSEGDSS
Sbjct: 61 VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSS 98

[Close]

BLAST of MS023120 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.0e-13
Identity = 35/83 (42.17%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 16  DGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVD 75
           D  + +   +NF QVQS+LD+N+ LI ++N NH+S++ DN+++NV LI+ELN NI +VV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 76  LYADLSYNFTRSVEVSSEGDSSG 99
           +Y+DL+ +F+        G   G
Sbjct: 82  MYSDLNTSFSSGFHGGKNGHDGG 104

[Close]

BLAST of MS023120 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.4e-13
Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 0


Query: 2   EGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVG 61
           E D      S A  D ++       F + Q  LDQN+ LI  +N+NH S+IPDN++RNVG
Sbjct: 20  ENDGEDVAASAAVEDVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVG 79

Query: 62  LIRELNNNIRRVVDLYADLSYNFTRSVE----VSSEGDSS 98
           LI E+N NI +V+++Y+DLS NF +  +     + +GD++
Sbjct: 80  LINEINGNISQVMEIYSDLSLNFAKKFDQRRRTTKDGDTT 119

[Close]

BLAST of MS023120 vs. ExPASy TrEMBL
Match: A0A6J1D2P4 (protein ELF4-LIKE 4 OS=Momordica charantia OX=3673 GN=LOC111016445 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.6e-53
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNRVV 115
           GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNRVV
Sbjct: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNRVV 114

[Close]

BLAST of MS023120 vs. ExPASy TrEMBL
Match: A0A6J1JGF0 (protein ELF4-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111484884 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.7e-48
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSGLGS AQID KILQ FQKNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSSAQIDTKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNR 113
           GLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGALKSDGKAGQKRNR
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNR 112

[Close]

BLAST of MS023120 vs. ExPASy TrEMBL
Match: A0A6J1H9N1 (protein ELF4-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111461807 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 9.7e-48
Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSGLGS AQID KILQ FQKNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGLGSSAQIDTKILQTFQKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNR 113
           GLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGALKSDGKAGQKRNR
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNR 112

[Close]

BLAST of MS023120 vs. ExPASy TrEMBL
Match: A0A6J1I047 (protein ELF4-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111467765 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 104/114 (91.23%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSG+GS AQID KILQ F KNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNRVV 115
           GLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGALKSDGKAGQKRNR V
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRAV 114

[Close]

BLAST of MS023120 vs. ExPASy TrEMBL
Match: A0A6J1F126 (protein ELF4-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111441179 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 104/114 (91.23%), Postives = 108/114 (94.74%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGDTFSG+GS AQID KILQ F KNFVQVQ+ILDQNKLLISEINQNHESKIPDNLNRNV
Sbjct: 1   MEGDTFSGIGSTAQIDSKILQTFHKNFVQVQNILDQNKLLISEINQNHESKIPDNLNRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNRVV 115
           GLIRELNNNIRRVVDLYADLS +FTRS+EVSSEGDSSGALKSDGKAGQKRNR V
Sbjct: 61  GLIRELNNNIRRVVDLYADLSCSFTRSMEVSSEGDSSGALKSDGKAGQKRNRAV 114

[Close]

BLAST of MS023120 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 )

HSP 1 Score: 159.1 bits (401), Expect = 2.1e-39
Identity = 82/112 (73.21%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGD  SG G    +DGK+LQ FQK+FV VQ ILDQN+LLI+EINQNHESK PDNL RNV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNR 113
           GLI+ELNNNIRRV  LY DLS++F RSV+ SSEG+SSG LKSDGKA QKR R
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFR 112

[Close]

BLAST of MS023120 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 )

HSP 1 Score: 159.1 bits (401), Expect = 2.1e-39
Identity = 82/112 (73.21%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGD  SG G    +DGK+LQ FQK+FV VQ ILDQN+LLI+EINQNHESK PDNL RNV
Sbjct: 1   MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKAGQKRNR 113
           GLI+ELNNNIRRV  LY DLS++F RSV+ SSEG+SSG LKSDGKA QKR R
Sbjct: 61  GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFR 112

[Close]

BLAST of MS023120 vs. TAIR 10
Match: AT1G72630.1 (ELF4-like 2 )

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-37
Identity = 81/113 (71.68%), Postives = 93/113 (82.30%), Query Frame = 0


Query: 1   MEGDTFSGLGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNV 60
           MEGD +SG G   Q+DGK+LQ FQK+FVQVQ ILDQN+LLI+EINQNHESK  D+L RNV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 61  GLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSSGALKSDGKA-GQKRNR 113
           GLIRELNNNIR V  LY DLS++F RSV+ SSEG+S+G LKSDGKA  QKR R
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTGTLKSDGKANNQKRFR 117

[Close]

BLAST of MS023120 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 )

HSP 1 Score: 146.0 bits (367), Expect = 1.9e-35
Identity = 75/98 (76.53%), Postives = 86/98 (87.76%), Query Frame = 0


Query: 1  MEGDTFSG-LGSGAQIDGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRN 60
          MEGDT S  +GSG Q+DGKILQ F+K+FVQVQ+ILD N+LLI+EINQNHESKIPDNL RN
Sbjct: 1  MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 61 VGLIRELNNNIRRVVDLYADLSYNFTRSVEVSSEGDSS 98
          VGLIRELNNN+RRV  LY DLS NF++S+E SSEGDSS
Sbjct: 61 VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSS 98

[Close]

BLAST of MS023120 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) )

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-14
Identity = 35/83 (42.17%), Postives = 57/83 (68.67%), Query Frame = 0


Query: 16  DGKILQRFQKNFVQVQSILDQNKLLISEINQNHESKIPDNLNRNVGLIRELNNNIRRVVD 75
           D  + +   +NF QVQS+LD+N+ LI ++N NH+S++ DN+++NV LI+ELN NI +VV+
Sbjct: 22  DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVN 81

Query: 76  LYADLSYNFTRSVEVSSEGDSSG 99
           +Y+DL+ +F+        G   G
Sbjct: 82  MYSDLNTSFSSGFHGGKNGHDGG 104

The following BLAST results are available for this feature:

BLAST of MS023120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147541.1	3.2e-53	100.00	protein ELF4-LIKE 4 [Momordica charantia]	[more]
XP_022961237.1	2.0e-47	93.75	protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022961238.1 protein ELF4-LIKE ...	[more]
XP_022933909.1	2.6e-47	91.23	protein ELF4-LIKE 4-like [Cucurbita moschata] >XP_022933910.1 protein ELF4-LIKE ...	[more]
XP_004144022.1	4.5e-47	92.86	protein ELF4-LIKE 4 [Cucumis sativus] >XP_008450908.1 PREDICTED: protein ELF4-LI...	[more]
KAG7021961.1	1.3e-46	91.96	Protein ELF4-LIKE 4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MS023120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q570U6	3.0e-38	73.21	Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1	[more]
Q94BS8	2.8e-36	71.68	Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1	[more]
Q8S8F5	2.6e-34	76.53	Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1	[more]
O04211	2.0e-13	42.17	Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1	[more]
O80877	3.4e-13	40.00	Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1	[more]

BLAST of MS023120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D2P4	1.6e-53	100.00	protein ELF4-LIKE 4 OS=Momordica charantia OX=3673 GN=LOC111016445 PE=3 SV=1	[more]
A0A6J1JGF0	9.7e-48	93.75	protein ELF4-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111484884 PE=3 SV=1	[more]
A0A6J1H9N1	9.7e-48	93.75	protein ELF4-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111461807 PE=3 SV=1	[more]
A0A6J1I047	1.3e-47	91.23	protein ELF4-LIKE 4-like OS=Cucurbita maxima OX=3661 GN=LOC111467765 PE=3 SV=1	[more]
A0A6J1F126	1.3e-47	91.23	protein ELF4-LIKE 4-like OS=Cucurbita moschata OX=3662 GN=LOC111441179 PE=3 SV=1	[more]

BLAST of MS023120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17455.1	2.1e-39	73.21	ELF4-like 4	[more]
AT1G17455.2	2.1e-39	73.21	ELF4-like 4	[more]
AT1G72630.1	2.0e-37	71.68	ELF4-like 2	[more]
AT2G06255.1	1.9e-35	76.53	ELF4-like 3	[more]
AT2G40080.1	1.4e-14	42.17	Protein of unknown function (DUF1313)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009741	Protein EARLY FLOWERING 4 domain	PFAM	PF07011	Elf4	coord: 14..95 e-value: 2.9E-38 score: 129.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..114
None	No IPR available	PANTHER	PTHR33469:SF16	PROTEIN ELF4-LIKE 3	coord: 1..113
IPR040462	Protein EARLY FLOWERING 4	PANTHER	PTHR33469	PROTEIN ELF4-LIKE 4	coord: 1..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023120.1	MS023120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042753	positive regulation of circadian rhythm