MS023008 (gene) Bitter gourd (TR) v1

Overview


Name	MS023008
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	zinc finger CCCH domain-containing protein 14-like
Location	scaffold357: 505149 .. 505892 (-)
RNA-Seq Expression	MS023008
Synteny	MS023008

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAGCACTACTGGCTGCCCATTTGGTGAAGGATGCCATTTCCTGCATTATGTTCCTGGCGGCTATAATACGGTTGCTCAAATGATGAACCTAACACCTATTCCTCCAGCAGCTAGAAATATGGCAGCCCCTCCTCCAATGTCCAACGGCTCGGCCAATCCCGTTGTTAAAACTCGTATGTGCAACAAGTATAACTCCGCTGAAGGCTGCAAATTTGGTGAGAAGTGCCATTTTGCTCATGGAGAATGGGAACTTGGAAAGCCTTTAGCTCCATCTCATGATGATCTTCGGGCCATGGGACATATTCCGAACCGTTTACCCAGTAGGATGGAAGCTGCTCCATCAGGCCCTGCTGCTAGCTTTGGCGCCTCTGCGACGGCAAAGATTAGTGTGGATGCTTCCCTTGCAGGAGCCATTATAGGGAAGGGTGGTATTAATTCCAAGCAGATTTGTCGTCAAACAGGAGCCAAACTTTCGATCAGGGACCATGAATCAGATCCCAACCTCAGAAACATTGAACTTGAGGGAACATTCGATCAGATTAAGGAAGCAAGCGCAATGGTGAGGGAGCTAATCGTAACGGTTTCAATGGCAGGCCCTCCGAAATCAGCAGGTGGCACAGCTGCTCCATCAGGTAACAACCATAAGACTAAACTTTGCGATAATTTTGCCAAAGGGTCTTGCACATTTGGAGAGAGATGCCACTTTGCGCATGGTGCTGCCGAGTTGCGCAAATCTGGTGCA

mRNA sequence

TTCAGCACTACTGGCTGCCCATTTGGTGAAGGATGCCATTTCCTGCATTATGTTCCTGGCGGCTATAATACGGTTGCTCAAATGATGAACCTAACACCTATTCCTCCAGCAGCTAGAAATATGGCAGCCCCTCCTCCAATGTCCAACGGCTCGGCCAATCCCGTTGTTAAAACTCGTATGTGCAACAAGTATAACTCCGCTGAAGGCTGCAAATTTGGTGAGAAGTGCCATTTTGCTCATGGAGAATGGGAACTTGGAAAGCCTTTAGCTCCATCTCATGATGATCTTCGGGCCATGGGACATATTCCGAACCGTTTACCCAGTAGGATGGAAGCTGCTCCATCAGGCCCTGCTGCTAGCTTTGGCGCCTCTGCGACGGCAAAGATTAGTGTGGATGCTTCCCTTGCAGGAGCCATTATAGGGAAGGGTGGTATTAATTCCAAGCAGATTTGTCGTCAAACAGGAGCCAAACTTTCGATCAGGGACCATGAATCAGATCCCAACCTCAGAAACATTGAACTTGAGGGAACATTCGATCAGATTAAGGAAGCAAGCGCAATGGTGAGGGAGCTAATCGTAACGGTTTCAATGGCAGGCCCTCCGAAATCAGCAGGTGGCACAGCTGCTCCATCAGGTAACAACCATAAGACTAAACTTTGCGATAATTTTGCCAAAGGGTCTTGCACATTTGGAGAGAGATGCCACTTTGCGCATGGTGCTGCCGAGTTGCGCAAATCTGGTGCA

Coding sequence (CDS)

TTCAGCACTACTGGCTGCCCATTTGGTGAAGGATGCCATTTCCTGCATTATGTTCCTGGCGGCTATAATACGGTTGCTCAAATGATGAACCTAACACCTATTCCTCCAGCAGCTAGAAATATGGCAGCCCCTCCTCCAATGTCCAACGGCTCGGCCAATCCCGTTGTTAAAACTCGTATGTGCAACAAGTATAACTCCGCTGAAGGCTGCAAATTTGGTGAGAAGTGCCATTTTGCTCATGGAGAATGGGAACTTGGAAAGCCTTTAGCTCCATCTCATGATGATCTTCGGGCCATGGGACATATTCCGAACCGTTTACCCAGTAGGATGGAAGCTGCTCCATCAGGCCCTGCTGCTAGCTTTGGCGCCTCTGCGACGGCAAAGATTAGTGTGGATGCTTCCCTTGCAGGAGCCATTATAGGGAAGGGTGGTATTAATTCCAAGCAGATTTGTCGTCAAACAGGAGCCAAACTTTCGATCAGGGACCATGAATCAGATCCCAACCTCAGAAACATTGAACTTGAGGGAACATTCGATCAGATTAAGGAAGCAAGCGCAATGGTGAGGGAGCTAATCGTAACGGTTTCAATGGCAGGCCCTCCGAAATCAGCAGGTGGCACAGCTGCTCCATCAGGTAACAACCATAAGACTAAACTTTGCGATAATTTTGCCAAAGGGTCTTGCACATTTGGAGAGAGATGCCACTTTGCGCATGGTGCTGCCGAGTTGCGCAAATCTGGTGCA

Protein sequence

FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRMCNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAASFGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIKEASAMVRELIVTVSMAGPPKSAGGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGA

Homology

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BLAST of MS023008 vs. NCBI nr
Match: XP_022158356.1 (zinc finger CCCH domain-containing protein 14-like [Momordica charantia])

HSP 1 Score: 505.8 bits (1301), Expect = 2.2e-139
Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRM 60
           +STTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRM
Sbjct: 44  YSTTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRM 103

Query: 61  CNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAAS 120
           CNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAAS
Sbjct: 104 CNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAAS 163

Query: 121 FGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQ 180
           FGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQ
Sbjct: 164 FGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQ 223

Query: 181 IKEASAMVRELIVTVSMAGPPKSAGGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGA 240
           IKEASAMVRELIVTVSMAGPPKSAGGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGA
Sbjct: 224 IKEASAMVRELIVTVSMAGPPKSAGGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGA 283

Query: 241 AELRKSGA 249
           AELRKSGA
Sbjct: 284 AELRKSGA 291

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BLAST of MS023008 vs. NCBI nr
Match: XP_038906130.1 (zinc finger CCCH domain-containing protein 14-like [Benincasa hispida])

HSP 1 Score: 453.8 bits (1166), Expect = 9.9e-124
Identity = 222/251 (88.45%), Postives = 233/251 (92.83%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRM 60
           +STTGCPFGEGCHFLHYVPGGYN VAQMMNL P PPA R+M APPPMSNGSA  VVK+RM
Sbjct: 44  YSTTGCPFGEGCHFLHYVPGGYNAVAQMMNLPPAPPAPRSMGAPPPMSNGSATQVVKSRM 103

Query: 61  CNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAAS 120
           CNKYNSAEGCKFG+KCHFAHG+WELGKP APSHDD RAMGHIPNRL SRM+A P GPAAS
Sbjct: 104 CNKYNSAEGCKFGDKCHFAHGDWELGKPTAPSHDDPRAMGHIPNRLSSRMDATPPGPAAS 163

Query: 121 FGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQ 180
           FGASATAKISVDASLAGAIIGKGG+NSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQ
Sbjct: 164 FGASATAKISVDASLAGAIIGKGGVNSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQ 223

Query: 181 IKEASAMVRELIVTVSMAGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCHF 240
           IKEASAMVRELIVTVSMAGPPKSA    GGTAAP+G+N KTKLCDNFAKGSCTFGERCHF
Sbjct: 224 IKEASAMVRELIVTVSMAGPPKSATGATGGTAAPAGSNFKTKLCDNFAKGSCTFGERCHF 283

Query: 241 AHGAAELRKSG 248
           AHGAAELRK G
Sbjct: 284 AHGAAELRKCG 294

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BLAST of MS023008 vs. NCBI nr
Match: XP_008443064.1 (PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo])

HSP 1 Score: 442.6 bits (1137), Expect = 2.3e-120
Identity = 217/251 (86.45%), Postives = 230/251 (91.63%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRM 60
           +STTGCPFGE CHFLHYVPGGYN VAQMMNL P PPA RNM APPPMSNGSA  VVK+RM
Sbjct: 44  YSTTGCPFGEACHFLHYVPGGYNAVAQMMNLPPAPPAPRNMGAPPPMSNGSATQVVKSRM 103

Query: 61  CNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAAS 120
           CNKYNSAEGCKFG+KCHFAH EWELGKP APSHDD R++GHIPNRL +RM+AAP   AAS
Sbjct: 104 CNKYNSAEGCKFGDKCHFAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAAS 163

Query: 121 FGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQ 180
           FGAS+TAKISVDASLAGAIIGKGGINSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQ
Sbjct: 164 FGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQ 223

Query: 181 IKEASAMVRELIVTVSMAGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCHF 240
           IKEASAMV+ELI+TVSMAGPPKSA    GGTA P+GNN KTKLCDNFAKGSCTFGERCHF
Sbjct: 224 IKEASAMVQELILTVSMAGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHF 283

Query: 241 AHGAAELRKSG 248
           AHGAAELRKSG
Sbjct: 284 AHGAAELRKSG 294

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BLAST of MS023008 vs. NCBI nr
Match: XP_004136573.1 (zinc finger CCCH domain-containing protein 14 [Cucumis sativus] >KGN59309.1 hypothetical protein Csa_000911 [Cucumis sativus])

HSP 1 Score: 440.7 bits (1132), Expect = 8.6e-120
Identity = 219/252 (86.90%), Postives = 229/252 (90.87%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAA-PPPMSNGSANPVVKTR 60
           +STTGCPFGE CHFLHYVPGGYN VAQMMNL P PPA RNM A PPPMSNGSA   VK+R
Sbjct: 44  YSTTGCPFGEACHFLHYVPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSR 103

Query: 61  MCNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAA 120
           MCNKYNSAEGCKFG+KCHFAH EWELGKP APSHDD R+MGHIPNRL SRM+A P G AA
Sbjct: 104 MCNKYNSAEGCKFGDKCHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAA 163

Query: 121 SFGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFD 180
           SFGAS+TAKISVDASLAGAIIGKGGINSKQICR+TGAKLSIRDHESDPNLRNIELEG+FD
Sbjct: 164 SFGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFD 223

Query: 181 QIKEASAMVRELIVTVSMAGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCH 240
           QIKEASAMV+ELIVTVSMAGPPKSA    GGTA P+GNN KTKLCDNFAKGSCTFGERCH
Sbjct: 224 QIKEASAMVQELIVTVSMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCH 283

Query: 241 FAHGAAELRKSG 248
           FAHGAAELRKSG
Sbjct: 284 FAHGAAELRKSG 295

[Close]

BLAST of MS023008 vs. NCBI nr
Match: KAA0043727.1 (zinc finger CCCH domain-containing protein 14-like [Cucumis melo var. makuwa] >TYK25406.1 zinc finger CCCH domain-containing protein 14-like [Cucumis melo var. makuwa])

HSP 1 Score: 439.5 bits (1129), Expect = 1.9e-119
Identity = 216/249 (86.75%), Postives = 228/249 (91.57%), Query Frame = 0


Query: 3   TTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRMCN 62
           TTGCPFGE CHFLHYVPGGYN VAQMMNL P PPA RNM APPPMSNGSA  VVK+RMCN
Sbjct: 15  TTGCPFGEACHFLHYVPGGYNAVAQMMNLPPAPPAPRNMGAPPPMSNGSATQVVKSRMCN 74

Query: 63  KYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAASFG 122
           KYNSAEGCKFG+KCHFAH EWELGKP APSHDD R++GHIPNRL +RM+AAP   AASFG
Sbjct: 75  KYNSAEGCKFGDKCHFAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAASFG 134

Query: 123 ASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIK 182
           AS+TAKISVDASLAGAIIGKGGINSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIK
Sbjct: 135 ASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIK 194

Query: 183 EASAMVRELIVTVSMAGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAH 242
           EASAMV+ELI+TVSMAGPPKSA    GGTA P+GNN KTKLCDNFAKGSCTFGERCHFAH
Sbjct: 195 EASAMVQELILTVSMAGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAH 254

Query: 243 GAAELRKSG 248
           GAAELRKSG
Sbjct: 255 GAAELRKSG 263

[Close]

BLAST of MS023008 vs. ExPASy Swiss-Prot
Match: Q7F8R0 (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.1e-80
Identity = 164/261 (62.84%), Postives = 187/261 (71.65%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNL--TPIPPAARNMAAPPPMSNGSANPVVKT 60
           FST+GCPFGEGCHFLH+ PGGY  VA+M NL    I P    M     + +G   P VKT
Sbjct: 43  FSTSGCPFGEGCHFLHHFPGGYQAVAKMTNLGGPAIAPPPGRMPMGNAVPDGPPTPTVKT 102

Query: 61  RMCNKYNSAEGCKFGEKCHFAHGEWELGKPL-----APSHDDLRAMGHI-PNRLPSRMEA 120
           R+CNKYN+AEGCK+G+KCHFAHGE ELGKP+      P     R  GH  P  +PS   +
Sbjct: 103 RLCNKYNTAEGCKWGDKCHFAHGERELGKPMLMDSSMPPPMGPRPTGHFAPPPMPSPAMS 162

Query: 121 APSGPAASFGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNI 180
            P    ASFGASATAKISVDASLAG IIG+GG+N+KQI R TGAKL+IRDHESD NL+NI
Sbjct: 163 TP----ASFGASATAKISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNI 222

Query: 181 ELEGTFDQIKEASAMVRELIVTVSMAGPP---KSAGGT--AAPSGNNHKTKLCDNFAKGS 240
           ELEGTFDQIK ASAMVRELIV++    PP   K  GG+      G+N KTKLC+NF KGS
Sbjct: 223 ELEGTFDQIKNASAMVRELIVSIGGGAPPQGKKPVGGSHRGGGPGSNFKTKLCENFTKGS 282

Query: 241 CTFGERCHFAHGAAELRKSGA 249
           CTFG+RCHFAHG  ELRKS A
Sbjct: 283 CTFGDRCHFAHGENELRKSAA 299

[Close]

BLAST of MS023008 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.0e-78
Identity = 161/264 (60.98%), Postives = 185/264 (70.08%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNL-TPIPPAARNMAAPPPMSNGSANPVV--K 60
           FST GCPFGEGCHF H+VPGGY  VA+ +NL  P  PA    A     + G+++P    K
Sbjct: 47  FSTIGCPFGEGCHFSHFVPGGYQAVAKTLNLGNPAVPAPAR-APMDHAAGGNSHPASSGK 106

Query: 61  TRMCNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAM---GHIPNRLPSRMEAAP 120
           TRMC KYN+AEGCKFG+KCHFAHGE ELGKP   SH+   A    G    R      AA 
Sbjct: 107 TRMCTKYNTAEGCKFGDKCHFAHGERELGKPAYMSHESAMAPPMGGRYGGRPEPPPPAAM 166

Query: 121 SGPAASFGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIEL 180
             PA +FGASATAKISVDASLAG IIGKGG+N+KQICR TG KLSIRDHESD NL+NIEL
Sbjct: 167 GPPAGNFGASATAKISVDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIEL 226

Query: 181 EGTFDQIKEASAMVRELIVTVSMAGPPKSAGGT---AAPSG-------NNHKTKLCDNFA 240
           EG FDQIK+AS MV ELI T+S + P K   G+   AAP+G       +N+KTKLC+NF 
Sbjct: 227 EGNFDQIKQASNMVGELIATISPSTPAKKPAGSAAGAAPAGRGGPGGRSNYKTKLCENFV 286

Query: 241 KGSCTFGERCHFAHGAAELRKSGA 249
           KG+CTFG+RCHFAHG  E RK  A
Sbjct: 287 KGTCTFGDRCHFAHGENEQRKGAA 309

[Close]

BLAST of MS023008 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 3.0e-75
Identity = 153/253 (60.47%), Postives = 174/253 (68.77%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNL--TPIPPAARNMAAPPPMSNGSANPVVKT 60
           FST+GCPFG  CHFLH  PGGY   A+M +   T +      M   P   NG     VKT
Sbjct: 42  FSTSGCPFGSSCHFLHNFPGGYQAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPTSSVKT 101

Query: 61  RMCNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPA 120
           RMCNKYN+AEGCK+G KCHFAHGE ELGKP+   +     MG +P   P  M      P 
Sbjct: 102 RMCNKYNTAEGCKWGSKCHFAHGERELGKPMLLDNSMPHPMGSMPFEAPP-MPGPDIVPP 161

Query: 121 ASFGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTF 180
           ++FGASATAKISVDASLAG IIGKGG N+K I R TGAKL+IRD+ES+PNL+NIELEGTF
Sbjct: 162 STFGASATAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTF 221

Query: 181 DQIKEASAMVRELIVTVSMAGPP---KSAGGTAAPSGNNHKTKLCDNFAKGSCTFGERCH 240
           DQIK ASAMV ELIV +S   PP      G  A   G+N KTKLC+NF KGSCTFG+RCH
Sbjct: 222 DQIKHASAMVTELIVRISGNAPPAKNPGRGSHAGGPGSNFKTKLCENFNKGSCTFGDRCH 281

Query: 241 FAHGAAELRKSGA 249
           FAHG +ELRK  A
Sbjct: 282 FAHGESELRKPPA 293

[Close]

BLAST of MS023008 vs. ExPASy Swiss-Prot
Match: Q9C7C3 (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.9e-54
Identity = 126/258 (48.84%), Postives = 149/258 (57.75%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNL-TPIPPAARNMAAPPPMSNGSANPVVKTR 60
           FST+GCPFGE CHFLHYVPGGYN V+QM N+  PIP  +RNM        GS N      
Sbjct: 46  FSTSGCPFGENCHFLHYVPGGYNAVSQMTNMGPPIPQVSRNM-------QGSGN------ 105

Query: 61  MCNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAA 120
                                                        R   R E+ P G  +
Sbjct: 106 -------------------------------------------GGRFSGRGESGP-GHVS 165

Query: 121 SFGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFD 180
           +FG SATA+ SVDASLAGAIIGKGG++SKQICRQTG KLSI+DHE DPNL+NI LEGT +
Sbjct: 166 NFGDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLE 225

Query: 181 QIKEASAMVRELIVTVSMAGPPKSAGGTAAPS----------GNNHKTKLCDNFAKGSCT 240
           QI EASAMV++LI  ++ A      GG               G+N KTK+C+ F+KG+CT
Sbjct: 226 QISEASAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCT 246

Query: 241 FGERCHFAHGAAELRKSG 248
           FG+RCHFAHG AELRKSG
Sbjct: 286 FGDRCHFAHGEAELRKSG 246

[Close]

BLAST of MS023008 vs. ExPASy Swiss-Prot
Match: Q9FG30 (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-53
Identity = 126/250 (50.40%), Postives = 151/250 (60.40%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNL-TPIPPAARNMAAPPPMSNGSANPVVKTR 60
           FST+GCPFG+ CHFLHYVPGGYN  AQM NL  P+   +RNM        GS  P     
Sbjct: 46  FSTSGCPFGDNCHFLHYVPGGYNAAAQMTNLRPPVSQVSRNM-------QGSGGP----- 105

Query: 61  MCNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAA 120
                    G +F  +          G P                          SGP +
Sbjct: 106 ---------GGRFSGR----------GDP-------------------------GSGPVS 165

Query: 121 SFGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFD 180
            FGAS T+KISVDASLAGAIIGKGGI+SKQICR+TGAKLSI+DHE DPNL+ IELEGTF+
Sbjct: 166 IFGAS-TSKISVDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFE 225

Query: 181 QIKEASAMVRELIVTVSMAGPPKSAGGTAAP--SGNNHKTKLCDNFAKGSCTFGERCHFA 240
           QI  AS MVRELI  +     P+  GG       G+N+KTK+CD ++KG+CT+G+RCHFA
Sbjct: 226 QINVASGMVRELIGRLGSVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFA 238

Query: 241 HGAAELRKSG 248
           HG +ELR+SG
Sbjct: 286 HGESELRRSG 238

[Close]

BLAST of MS023008 vs. ExPASy TrEMBL
Match: A0A6J1E0P5 (zinc finger CCCH domain-containing protein 14-like OS=Momordica charantia OX=3673 GN=LOC111024859 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.1e-139
Identity = 247/248 (99.60%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRM 60
           +STTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRM
Sbjct: 44  YSTTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRM 103

Query: 61  CNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAAS 120
           CNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAAS
Sbjct: 104 CNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAAS 163

Query: 121 FGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQ 180
           FGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQ
Sbjct: 164 FGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQ 223

Query: 181 IKEASAMVRELIVTVSMAGPPKSAGGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGA 240
           IKEASAMVRELIVTVSMAGPPKSAGGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGA
Sbjct: 224 IKEASAMVRELIVTVSMAGPPKSAGGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAHGA 283

Query: 241 AELRKSGA 249
           AELRKSGA
Sbjct: 284 AELRKSGA 291

[Close]

BLAST of MS023008 vs. ExPASy TrEMBL
Match: A0A1S3B785 (zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LOC103486772 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.1e-120
Identity = 217/251 (86.45%), Postives = 230/251 (91.63%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRM 60
           +STTGCPFGE CHFLHYVPGGYN VAQMMNL P PPA RNM APPPMSNGSA  VVK+RM
Sbjct: 44  YSTTGCPFGEACHFLHYVPGGYNAVAQMMNLPPAPPAPRNMGAPPPMSNGSATQVVKSRM 103

Query: 61  CNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAAS 120
           CNKYNSAEGCKFG+KCHFAH EWELGKP APSHDD R++GHIPNRL +RM+AAP   AAS
Sbjct: 104 CNKYNSAEGCKFGDKCHFAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAAS 163

Query: 121 FGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQ 180
           FGAS+TAKISVDASLAGAIIGKGGINSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQ
Sbjct: 164 FGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQ 223

Query: 181 IKEASAMVRELIVTVSMAGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCHF 240
           IKEASAMV+ELI+TVSMAGPPKSA    GGTA P+GNN KTKLCDNFAKGSCTFGERCHF
Sbjct: 224 IKEASAMVQELILTVSMAGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHF 283

Query: 241 AHGAAELRKSG 248
           AHGAAELRKSG
Sbjct: 284 AHGAAELRKSG 294

[Close]

BLAST of MS023008 vs. ExPASy TrEMBL
Match: A0A0A0LEG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G808380 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 4.2e-120
Identity = 219/252 (86.90%), Postives = 229/252 (90.87%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAA-PPPMSNGSANPVVKTR 60
           +STTGCPFGE CHFLHYVPGGYN VAQMMNL P PPA RNM A PPPMSNGSA   VK+R
Sbjct: 44  YSTTGCPFGEACHFLHYVPGGYNAVAQMMNLPPAPPAPRNMGAPPPPMSNGSATQAVKSR 103

Query: 61  MCNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAA 120
           MCNKYNSAEGCKFG+KCHFAH EWELGKP APSHDD R+MGHIPNRL SRM+A P G AA
Sbjct: 104 MCNKYNSAEGCKFGDKCHFAHAEWELGKPSAPSHDDPRSMGHIPNRLASRMDAGPPGLAA 163

Query: 121 SFGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFD 180
           SFGAS+TAKISVDASLAGAIIGKGGINSKQICR+TGAKLSIRDHESDPNLRNIELEG+FD
Sbjct: 164 SFGASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFD 223

Query: 181 QIKEASAMVRELIVTVSMAGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCH 240
           QIKEASAMV+ELIVTVSMAGPPKSA    GGTA P+GNN KTKLCDNFAKGSCTFGERCH
Sbjct: 224 QIKEASAMVQELIVTVSMAGPPKSATGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCH 283

Query: 241 FAHGAAELRKSG 248
           FAHGAAELRKSG
Sbjct: 284 FAHGAAELRKSG 295

[Close]

BLAST of MS023008 vs. ExPASy TrEMBL
Match: A0A5A7TPJ7 (Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005480 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 9.3e-120
Identity = 216/249 (86.75%), Postives = 228/249 (91.57%), Query Frame = 0


Query: 3   TTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRMCN 62
           TTGCPFGE CHFLHYVPGGYN VAQMMNL P PPA RNM APPPMSNGSA  VVK+RMCN
Sbjct: 15  TTGCPFGEACHFLHYVPGGYNAVAQMMNLPPAPPAPRNMGAPPPMSNGSATQVVKSRMCN 74

Query: 63  KYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAASFG 122
           KYNSAEGCKFG+KCHFAH EWELGKP APSHDD R++GHIPNRL +RM+AAP   AASFG
Sbjct: 75  KYNSAEGCKFGDKCHFAHAEWELGKPSAPSHDDPRSLGHIPNRLANRMDAAPPALAASFG 134

Query: 123 ASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQIK 182
           AS+TAKISVDASLAGAIIGKGGINSKQICR+TGAKLSIRDHESDPNLRNIELEG+FDQIK
Sbjct: 135 ASSTAKISVDASLAGAIIGKGGINSKQICRRTGAKLSIRDHESDPNLRNIELEGSFDQIK 194

Query: 183 EASAMVRELIVTVSMAGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCHFAH 242
           EASAMV+ELI+TVSMAGPPKSA    GGTA P+GNN KTKLCDNFAKGSCTFGERCHFAH
Sbjct: 195 EASAMVQELILTVSMAGPPKSAIGATGGTAGPAGNNFKTKLCDNFAKGSCTFGERCHFAH 254

Query: 243 GAAELRKSG 248
           GAAELRKSG
Sbjct: 255 GAAELRKSG 263

[Close]

BLAST of MS023008 vs. ExPASy TrEMBL
Match: A0A6J1F0S5 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111441341 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 8.7e-118
Identity = 213/252 (84.52%), Postives = 226/252 (89.68%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNGSANPVVKTRM 60
           +STTGC FGEGCHFLHYVPGGYN VAQMMNL P P A RNMAAP PMSNGS     KTRM
Sbjct: 44  YSTTGCQFGEGCHFLHYVPGGYNAVAQMMNLEPAPSAPRNMAAPHPMSNGSTTQDAKTRM 103

Query: 61  CNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAAS 120
           CNKYNS EGCKFG+KCHFAHGEWELG+P APSH+D RA G+ P+RLPSRM AAP+GPAAS
Sbjct: 104 CNKYNSTEGCKFGDKCHFAHGEWELGRPSAPSHEDPRATGYFPSRLPSRMNAAPAGPAAS 163

Query: 121 FGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQ 180
           FGASATAKISVDASLAGAIIGKGG+NSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQ
Sbjct: 164 FGASATAKISVDASLAGAIIGKGGVNSKQICRQTGAKLSIRDHESDPNLRNIELEGTFDQ 223

Query: 181 IKEASAMVRELIVTVSMAGPPKSA----GGTAAPSGNNHKTKLCDNFAKGSCTFGERCHF 240
           IKEASAMVRELI TVSMAGP K+A    GG AAP+G+N+KTKLCDNF KGSCTFGERCHF
Sbjct: 224 IKEASAMVRELIATVSMAGPSKAATRTTGGPAAPAGSNYKTKLCDNFGKGSCTFGERCHF 283

Query: 241 AHGAAELRKSGA 249
           AHG+AELRKSGA
Sbjct: 284 AHGSAELRKSGA 295

[Close]

BLAST of MS023008 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 213.4 bits (542), Expect = 2.1e-55
Identity = 126/258 (48.84%), Postives = 149/258 (57.75%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNL-TPIPPAARNMAAPPPMSNGSANPVVKTR 60
           FST+GCPFGE CHFLHYVPGGYN V+QM N+  PIP  +RNM        GS N      
Sbjct: 46  FSTSGCPFGENCHFLHYVPGGYNAVSQMTNMGPPIPQVSRNM-------QGSGN------ 105

Query: 61  MCNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAA 120
                                                        R   R E+ P G  +
Sbjct: 106 -------------------------------------------GGRFSGRGESGP-GHVS 165

Query: 121 SFGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFD 180
           +FG SATA+ SVDASLAGAIIGKGG++SKQICRQTG KLSI+DHE DPNL+NI LEGT +
Sbjct: 166 NFGDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLE 225

Query: 181 QIKEASAMVRELIVTVSMAGPPKSAGGTAAPS----------GNNHKTKLCDNFAKGSCT 240
           QI EASAMV++LI  ++ A      GG               G+N KTK+C+ F+KG+CT
Sbjct: 226 QISEASAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCT 246

Query: 241 FGERCHFAHGAAELRKSG 248
           FG+RCHFAHG AELRKSG
Sbjct: 286 FGDRCHFAHGEAELRKSG 246

[Close]

BLAST of MS023008 vs. TAIR 10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 211.5 bits (537), Expect = 7.9e-55
Identity = 126/250 (50.40%), Postives = 151/250 (60.40%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNL-TPIPPAARNMAAPPPMSNGSANPVVKTR 60
           FST+GCPFG+ CHFLHYVPGGYN  AQM NL  P+   +RNM        GS  P     
Sbjct: 46  FSTSGCPFGDNCHFLHYVPGGYNAAAQMTNLRPPVSQVSRNM-------QGSGGP----- 105

Query: 61  MCNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIPNRLPSRMEAAPSGPAA 120
                    G +F  +          G P                          SGP +
Sbjct: 106 ---------GGRFSGR----------GDP-------------------------GSGPVS 165

Query: 121 SFGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFD 180
            FGAS T+KISVDASLAGAIIGKGGI+SKQICR+TGAKLSI+DHE DPNL+ IELEGTF+
Sbjct: 166 IFGAS-TSKISVDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFE 225

Query: 181 QIKEASAMVRELIVTVSMAGPPKSAGGTAAP--SGNNHKTKLCDNFAKGSCTFGERCHFA 240
           QI  AS MVRELI  +     P+  GG       G+N+KTK+CD ++KG+CT+G+RCHFA
Sbjct: 226 QINVASGMVRELIGRLGSVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFA 238

Query: 241 HGAAELRKSG 248
           HG +ELR+SG
Sbjct: 286 HGESELRRSG 238

[Close]

BLAST of MS023008 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 55.5 bits (132), Expect = 7.3e-08
Identity = 63/226 (27.88%), Postives = 89/226 (39.38%), Query Frame = 0


Query: 44  PPPMSNGSANPVVKTRMCNKYNSAEGCKFGEKCHFAHGEWELGKPLAPSHDDLRAMGHIP 103
           PPP++ G+AN   KTRMC K+  A  C+ GE C+FAHG  +L +P              P
Sbjct: 93  PPPVNKGTANIFYKTRMCAKFR-AGTCRNGELCNFAHGIEDLRQP--------------P 152

Query: 104 NRLPSRMEAAPSGPAASFGASATAKISVDASLAGAIIGKGGINSKQICRQTGAKLSIRDH 163
           +     +   P+G           +     SLA  +      + K I R    +      
Sbjct: 153 SNWQEIVGPPPAGQDRE-RERERERERERPSLAPVVNNNWEDDQKIILRMKLCRKFCFGE 212

Query: 164 ESDPNLRNIELEGTFDQIKEASAMVRE---LIVTVSMAGPPKSA----------GGTAAP 223
           E     R   +     + +E S  +RE   + V  + A  P             G    P
Sbjct: 213 ECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLIEVNRQGSIPVP 272

Query: 224 SGNNH---------KTKLCDNF-AKGSCTFGERCHFAHGAAELRKS 247
           +  N+         KT+LC  F   G C FG++CHFAHG AEL  S
Sbjct: 273 APMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNS 302

[Close]

BLAST of MS023008 vs. TAIR 10
Match: AT2G25970.1 (KH domain-containing protein )

HSP 1 Score: 52.0 bits (123), Expect = 8.0e-07
Identity = 51/183 (27.87%), Postives = 78/183 (42.62%), Query Frame = 0


Query: 33  PIPPAARNMAAP---PPMSNGSANPVVKTRMCNKYNSAE-GCKFGEKCHFAHGEWELGKP 92
           PIP A+ +  AP   PP S  S  P +      K  + E   +            + G  
Sbjct: 38  PIPSASVDPTAPTGLPPSSYNSVPPPMDEIQIAKQKAQEIAARLLNSADAKRPRVDNG-- 97

Query: 93  LAPSHDDLRAMGHIPNRLPSRMEAAPSGPAASFGA--SATAKISVDASLAGAIIGKGGIN 152
            +  + D +     P+         PS    S+G+    T KI +     G IIGKGG  
Sbjct: 98  ASYDYGDNKGFSSYPSEGKQMSGTVPSSIPVSYGSFQGTTKKIDIPNMRVGVIIGKGGET 157

Query: 153 SKQICRQTGAKLSI-RDHESDPN--LRNIELEGTFDQIKEASAMVRELIVTVSMAGPPKS 207
            K +  Q+GAK+ + RD ++DPN   R ++L GT DQI +A  ++ +++          S
Sbjct: 158 IKYLQLQSGAKIQVTRDMDADPNCATRTVDLTGTPDQISKAEQLITDVLQEAEAGNTAGS 217

[Close]

BLAST of MS023008 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 46.2 bits (108), Expect = 4.4e-05
Identity = 36/110 (32.73%), Postives = 46/110 (41.82%), Query Frame = 0


Query: 1   FSTTGCPFGEGCHFLHYVPGGYNTVAQMMNLTPIPPAARNMAAPPPMSNG----SANPVV 60
           ++  GCP+GE C FLH      N  +  ++L P    +         S G    S+N VV
Sbjct: 182 YTEEGCPYGESCTFLH-DEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGGSSSNVVV 241

Query: 61  ---------------------KTRMCNKYNSAEGCKFGEKCHFAHGEWEL 86
                                KTR+CNK+     C FG KCHFAHG  EL
Sbjct: 242 LGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAEL 290

The following BLAST results are available for this feature:

BLAST of MS023008 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158356.1	2.2e-139	99.60	zinc finger CCCH domain-containing protein 14-like [Momordica charantia]	[more]
XP_038906130.1	9.9e-124	88.45	zinc finger CCCH domain-containing protein 14-like [Benincasa hispida]	[more]
XP_008443064.1	2.3e-120	86.45	PREDICTED: zinc finger CCCH domain-containing protein 14-like [Cucumis melo]	[more]
XP_004136573.1	8.6e-120	86.90	zinc finger CCCH domain-containing protein 14 [Cucumis sativus] >KGN59309.1 hypo...	[more]
KAA0043727.1	1.9e-119	86.75	zinc finger CCCH domain-containing protein 14-like [Cucumis melo var. makuwa] >T...	[more]

BLAST of MS023008 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7F8R0	1.1e-80	62.84	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX...	[more]
Q7XPK1	5.0e-78	60.98	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]
Q69XQ3	3.0e-75	60.47	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]
Q9C7C3	2.9e-54	48.84	Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FG30	1.1e-53	50.40	Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of MS023008 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E0P5	1.1e-139	99.60	zinc finger CCCH domain-containing protein 14-like OS=Momordica charantia OX=367...	[more]
A0A1S3B785	1.1e-120	86.45	zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0LEG5	4.2e-120	86.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G808380 PE=4 SV=1	[more]
A0A5A7TPJ7	9.3e-120	86.75	Zinc finger CCCH domain-containing protein 14-like OS=Cucumis melo var. makuwa O...	[more]
A0A6J1F0S5	8.7e-118	84.52	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of MS023008 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12130.1	2.1e-55	48.84	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT5G06770.1	7.9e-55	50.40	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT3G19360.1	7.3e-08	27.88	Zinc finger (CCCH-type) family protein	[more]
AT2G25970.1	8.0e-07	27.87	KH domain-containing protein	[more]
AT1G32360.1	4.4e-05	32.73	Zinc finger (CCCH-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 123..193 e-value: 4.2E-13 score: 59.5
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 214..240 e-value: 4.8E-6 score: 36.1 coord: 57..82 e-value: 0.53 score: 18.5
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 216..239 e-value: 5.3E-9 score: 35.8 coord: 57..82 e-value: 3.0E-4 score: 20.6
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 214..241 score: 15.065375
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 1..19 score: 9.300468
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 56..83 score: 12.671155
None	No IPR available	PFAM	PF14608	zf-CCCH_2	coord: 5..16 e-value: 0.31 score: 11.7
None	No IPR available	GENE3D	4.10.1000.10		coord: 208..246 e-value: 3.5E-13 score: 50.7 coord: 48..87 e-value: 1.6E-11 score: 45.3
None	No IPR available	PANTHER	PTHR10288:SF273	TRANSCRIPTION FACTOR C3H FAMILY-RELATED	coord: 1..247
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 1..247
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 124..188 score: 14.801689
None	No IPR available	CDD	cd00105	KH-I	coord: 126..188 e-value: 6.80988E-16 score: 67.9703
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 126..190 e-value: 1.9E-12 score: 46.8
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 124..195 e-value: 4.8E-15 score: 57.2
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 116..194
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 214..244
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 54..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS023008.1	MS023008.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding