MS018674 (gene) Bitter gourd (TR) v1

Overview
NameMS018674
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGEM-like protein 7 isoform X1
Locationscaffold313: 962698 .. 962799 (-)
RNA-Seq ExpressionMS018674
SyntenyMS018674
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGAGACTAGGATCCAAGATCACAGAAACTGTAAAGGGAAAGTTGAGCTTGGGAGCTAAAATTCTTCTAGCAGGTGGATTAAGGAAAACCTACAGGCAATTG

mRNA sequence

GTGAGACTAGGATCCAAGATCACAGAAACTGTAAAGGGAAAGTTGAGCTTGGGAGCTAAAATTCTTCTAGCAGGTGGATTAAGGAAAACCTACAGGCAATTG

Coding sequence (CDS)

GTGAGACTAGGATCCAAGATCACAGAAACTGTAAAGGGAAAGTTGAGCTTGGGAGCTAAAATTCTTCTAGCAGGTGGATTAAGGAAAACCTACAGGCAATTG

Protein sequence

VRLGSKITETVKGKLSLGAKILLAGGLRKTYRQL
Homology
[Close]
BLAST of MS018674 vs. NCBI nr
Match: XP_022141598.1 (putative GEM-like protein 8 isoform X2 [Momordica charantia])

HSP 1 Score: 61.2 bits (147), Expect = 2.0e-06
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   VRLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           VRLGSKITETVKGKLSLGAKILL GGLRK Y+QL
Sbjct: 90  VRLGSKITETVKGKLSLGAKILLVGGLRKIYKQL 123

[Close]
BLAST of MS018674 vs. NCBI nr
Match: XP_022141600.1 (putative GEM-like protein 8 isoform X4 [Momordica charantia])

HSP 1 Score: 61.2 bits (147), Expect = 2.0e-06
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   VRLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           VRLGSKITETVKGKLSLGAKILL GGLRK Y+QL
Sbjct: 79  VRLGSKITETVKGKLSLGAKILLVGGLRKIYKQL 112

[Close]
BLAST of MS018674 vs. NCBI nr
Match: XP_022141596.1 (putative GEM-like protein 8 isoform X1 [Momordica charantia] >XP_022141597.1 putative GEM-like protein 8 isoform X1 [Momordica charantia])

HSP 1 Score: 61.2 bits (147), Expect = 2.0e-06
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   VRLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           VRLGSKITETVKGKLSLGAKILL GGLRK Y+QL
Sbjct: 102 VRLGSKITETVKGKLSLGAKILLVGGLRKIYKQL 135

[Close]
BLAST of MS018674 vs. NCBI nr
Match: XP_022141602.1 (putative GEM-like protein 8 isoform X5 [Momordica charantia])

HSP 1 Score: 61.2 bits (147), Expect = 2.0e-06
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   VRLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           VRLGSKITETVKGKLSLGAKILL GGLRK Y+QL
Sbjct: 77  VRLGSKITETVKGKLSLGAKILLVGGLRKIYKQL 110

[Close]
BLAST of MS018674 vs. NCBI nr
Match: XP_022141603.1 (putative GEM-like protein 8 isoform X6 [Momordica charantia])

HSP 1 Score: 61.2 bits (147), Expect = 2.0e-06
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   VRLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           VRLGSKITETVKGKLSLGAKILL GGLRK Y+QL
Sbjct: 72  VRLGSKITETVKGKLSLGAKILLVGGLRKIYKQL 105

[Close]
BLAST of MS018674 vs. ExPASy Swiss-Prot
Match: Q9FMW6 (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 6.5e-05
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 2   RLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           +LG K+TETVK KLSLGAKIL  GGL K Y++L
Sbjct: 69  KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRL 101

[Close]
BLAST of MS018674 vs. ExPASy Swiss-Prot
Match: Q9FMW5 (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 6.5e-05
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 2  RLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
          +LG K+TETVK KLSLGAKIL  GGL K Y++L
Sbjct: 61 KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRL 93

[Close]
BLAST of MS018674 vs. ExPASy Swiss-Prot
Match: Q9FMW4 (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 1.5e-04
Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 2   RLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           +LG K+TETVK KLSLGA+IL  GGL K Y++L
Sbjct: 69  KLGPKLTETVKRKLSLGARILQMGGLEKIYKRL 101

[Close]
BLAST of MS018674 vs. ExPASy TrEMBL
Match: A0A6J1CJN3 (putative GEM-like protein 8 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011920 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.4e-07
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   VRLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           VRLGSKITETVKGKLSLGAKILL GGLRK Y+QL
Sbjct: 102 VRLGSKITETVKGKLSLGAKILLVGGLRKIYKQL 135

[Close]
BLAST of MS018674 vs. ExPASy TrEMBL
Match: A0A6J1CIK1 (putative GEM-like protein 8 isoform X4 OS=Momordica charantia OX=3673 GN=LOC111011920 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.4e-07
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   VRLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           VRLGSKITETVKGKLSLGAKILL GGLRK Y+QL
Sbjct: 79  VRLGSKITETVKGKLSLGAKILLVGGLRKIYKQL 112

[Close]
BLAST of MS018674 vs. ExPASy TrEMBL
Match: A0A6J1CJ44 (putative GEM-like protein 8 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011920 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.4e-07
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   VRLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           VRLGSKITETVKGKLSLGAKILL GGLRK Y+QL
Sbjct: 85  VRLGSKITETVKGKLSLGAKILLVGGLRKIYKQL 118

[Close]
BLAST of MS018674 vs. ExPASy TrEMBL
Match: A0A6J1CKA0 (putative GEM-like protein 8 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111011920 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.4e-07
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   VRLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           VRLGSKITETVKGKLSLGAKILL GGLRK Y+QL
Sbjct: 77  VRLGSKITETVKGKLSLGAKILLVGGLRKIYKQL 110

[Close]
BLAST of MS018674 vs. ExPASy TrEMBL
Match: A0A6J1CKZ6 (putative GEM-like protein 8 isoform X6 OS=Momordica charantia OX=3673 GN=LOC111011920 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.4e-07
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0 

Query: 1   VRLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           VRLGSKITETVKGKLSLGAKILL GGLRK Y+QL
Sbjct: 72  VRLGSKITETVKGKLSLGAKILLVGGLRKIYKQL 105

[Close]
BLAST of MS018674 vs. TAIR 10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 46.6 bits (109), Expect = 4.6e-06
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 2  RLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
          +LG K+TETVK KLSLGAKIL  GGL K Y++L
Sbjct: 61 KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRL 93

[Close]
BLAST of MS018674 vs. TAIR 10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 46.6 bits (109), Expect = 4.6e-06
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 2   RLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           +LG K+TETVK KLSLGAKIL  GGL K Y++L
Sbjct: 131 KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRL 163

[Close]
BLAST of MS018674 vs. TAIR 10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 45.4 bits (106), Expect = 1.0e-05
Identity = 22/33 (66.67%), Postives = 27/33 (81.82%), Query Frame = 0 

Query: 2   RLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           +LG K+TETVK KLSLGA+IL  GGL K Y++L
Sbjct: 69  KLGPKLTETVKRKLSLGARILQMGGLEKIYKRL 101

[Close]
BLAST of MS018674 vs. TAIR 10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related )

HSP 1 Score: 40.4 bits (93), Expect = 3.3e-04
Identity = 19/33 (57.58%), Postives = 26/33 (78.79%), Query Frame = 0 

Query: 2   RLGSKITETVKGKLSLGAKILLAGGLRKTYRQL 35
           ++  K+TETVK KLSLGA+IL  GGL K +++L
Sbjct: 68  KIRPKLTETVKRKLSLGARILQVGGLEKIFKRL 100

The following BLAST results are available for this feature:
BLAST of MS018674 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022141598.12.0e-0691.18putative GEM-like protein 8 isoform X2 [Momordica charantia][more]
XP_022141600.12.0e-0691.18putative GEM-like protein 8 isoform X4 [Momordica charantia][more]
XP_022141596.12.0e-0691.18putative GEM-like protein 8 isoform X1 [Momordica charantia] >XP_022141597.1 put... [more]
XP_022141602.12.0e-0691.18putative GEM-like protein 8 isoform X5 [Momordica charantia][more]
XP_022141603.12.0e-0691.18putative GEM-like protein 8 isoform X6 [Momordica charantia][more]
BLAST of MS018674 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FMW66.5e-0569.70GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2[more]
Q9FMW56.5e-0569.70GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1[more]
Q9FMW41.5e-0466.67Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV... [more]
BLAST of MS018674 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CJN39.4e-0791.18putative GEM-like protein 8 isoform X1 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1CIK19.4e-0791.18putative GEM-like protein 8 isoform X4 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1CJ449.4e-0791.18putative GEM-like protein 8 isoform X3 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1CKA09.4e-0791.18putative GEM-like protein 8 isoform X5 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A6J1CKZ69.4e-0791.18putative GEM-like protein 8 isoform X6 OS=Momordica charantia OX=3673 GN=LOC1110... [more]
BLAST of MS018674 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G23360.14.6e-0669.70GRAM domain-containing protein / ABA-responsive protein-related [more]
AT5G23350.14.6e-0669.70GRAM domain-containing protein / ABA-responsive protein-related [more]
AT5G23370.11.0e-0566.67GRAM domain-containing protein / ABA-responsive protein-related [more]
AT5G08350.13.3e-0457.58GRAM domain-containing protein / ABA-responsive protein-related [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS018674.1MS018674.1mRNA