MS016883 (gene) Bitter gourd (TR) v1

Overview


Name	MS016883
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	SAUR-like auxin-responsive protein family
Location	scaffold9_1: 786662 .. 786994 (+)
RNA-Seq Expression	MS016883
Synteny	MS016883

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTGCGCCGATCCAACAAGCTCTCGCAGGCGGCGCCGGCGGTGGTCAAGCAAATTATGAAGCGCTGTTCCTCCAGCTTGAGGAGCAAGAAGCAGCCGCCGCCGCCGCCGCAATGCGAGGAGATTCCGGTGGACGTGCCGGAGGGGCACTTCGTGGTGTACGTGAGCGAGAACAGGAGCCGCTACATCGTGCCGCTCACGTTTCTGGCGCGCCCCGAGTTCCAAATCCTTCTCCAATTGGCCGAGGAGGAGTTCGGTTTCAGCCACCGCATGGGCCTCACCATCCCCTGCGAGGAGCAGGTCTTTCGAGCCCTAACCTCGGCCCTCCGA

mRNA sequence

ATGGCGGTGCGCCGATCCAACAAGCTCTCGCAGGCGGCGCCGGCGGTGGTCAAGCAAATTATGAAGCGCTGTTCCTCCAGCTTGAGGAGCAAGAAGCAGCCGCCGCCGCCGCCGCAATGCGAGGAGATTCCGGTGGACGTGCCGGAGGGGCACTTCGTGGTGTACGTGAGCGAGAACAGGAGCCGCTACATCGTGCCGCTCACGTTTCTGGCGCGCCCCGAGTTCCAAATCCTTCTCCAATTGGCCGAGGAGGAGTTCGGTTTCAGCCACCGCATGGGCCTCACCATCCCCTGCGAGGAGCAGGTCTTTCGAGCCCTAACCTCGGCCCTCCGA

Coding sequence (CDS)

ATGGCGGTGCGCCGATCCAACAAGCTCTCGCAGGCGGCGCCGGCGGTGGTCAAGCAAATTATGAAGCGCTGTTCCTCCAGCTTGAGGAGCAAGAAGCAGCCGCCGCCGCCGCCGCAATGCGAGGAGATTCCGGTGGACGTGCCGGAGGGGCACTTCGTGGTGTACGTGAGCGAGAACAGGAGCCGCTACATCGTGCCGCTCACGTTTCTGGCGCGCCCCGAGTTCCAAATCCTTCTCCAATTGGCCGAGGAGGAGTTCGGTTTCAGCCACCGCATGGGCCTCACCATCCCCTGCGAGGAGCAGGTCTTTCGAGCCCTAACCTCGGCCCTCCGA

Protein sequence

MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR

Homology

[Close]

BLAST of MS016883 vs. NCBI nr
Match: XP_038886317.1 (auxin-responsive protein SAUR50-like [Benincasa hispida])

HSP 1 Score: 149.1 bits (375), Expect = 2.3e-32
Identity = 83/109 (76.15%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 6   SNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQC---EEIPVDVPEGHFVVYVSENRSR 65
           S KL+Q   AVVKQI KRC SSLR  K      QC   +EIPVDVP+GHFVVYVSENRSR
Sbjct: 4   STKLTQT--AVVKQIKKRC-SSLRINKNKNTHLQCGGGDEIPVDVPKGHFVVYVSENRSR 63

Query: 66  YIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR 112
           YIVPLTFL RPEFQILLQLAEEEFGF+H MGLTIPCEEQVF++LTS LR
Sbjct: 64  YIVPLTFLTRPEFQILLQLAEEEFGFNHNMGLTIPCEEQVFQSLTSMLR 109

[Close]

BLAST of MS016883 vs. NCBI nr
Match: XP_004152658.1 (auxin-responsive protein SAUR50 [Cucumis sativus] >KGN62666.1 hypothetical protein Csa_021944 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 4.4e-31
Identity = 83/114 (72.81%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 6   SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-----PPPPQC---EEIPVDVPEGHFVVYVS 65
           S KL+    AVVKQI KRCSS   +KK           QC   EEIPVDVP+GHFVVYVS
Sbjct: 4   STKLTHT--AVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYVS 63

Query: 66  ENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR 112
           ENRSRYIVPLTFL RPEFQILLQLAEEEFGFSH MGLTIPCEEQVF++LTS LR
Sbjct: 64  ENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 115

[Close]

BLAST of MS016883 vs. NCBI nr
Match: KAE8057224.1 (hypothetical protein FH972_013931 [Carpinus fangiana])

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30
Identity = 78/111 (70.27%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 1   MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENR 60
           MA++RSNKLSQA  A++KQI+KRCSS    KKQ     Q   +P+DVP+GHFVVYV ENR
Sbjct: 1   MAIKRSNKLSQA--AMLKQILKRCSS--LGKKQQGYDEQ--GLPLDVPKGHFVVYVGENR 60

Query: 61  SRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR 112
           SRYIVP+++L RPEFQILLQ AEEEFGFSH MGLTIPCEE+VF++LTS LR
Sbjct: 61  SRYIVPISYLTRPEFQILLQQAEEEFGFSHDMGLTIPCEEEVFQSLTSTLR 105

[Close]

BLAST of MS016883 vs. NCBI nr
Match: KAG6598492.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-30
Identity = 79/105 (75.24%), Postives = 82/105 (78.10%), Query Frame = 0


Query: 15  AVVKQIMKRCSSSLRSKKQPPPPPQC--------EEIPVDVPEGHFVVYVSENRSRYIVP 74
           AVVKQIMKRC S LRS K      QC         EIPVDVP+GHFVVYVSENRSRYIVP
Sbjct: 2   AVVKQIMKRC-SGLRSNKNKNNQLQCGGGAGAGAGEIPVDVPKGHFVVYVSENRSRYIVP 61

Query: 75  LTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR 112
           LT L  PEFQILLQLAEEEFGFSH MGLTIPCEEQVF++LTS LR
Sbjct: 62  LTVLTSPEFQILLQLAEEEFGFSHHMGLTIPCEEQVFQSLTSMLR 105

[Close]

BLAST of MS016883 vs. NCBI nr
Match: XP_008444786.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0065174.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa])

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-30
Identity = 83/116 (71.55%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 6   SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-------PPPPQC----EEIPVDVPEGHFVV 65
           S KL+    AVVKQI KRCSS   +KK             QC    EEIPVDVP+GHFVV
Sbjct: 4   STKLTHT--AVVKQIKKRCSSLRITKKNKNNNNNNNTHHLQCGGGGEEIPVDVPKGHFVV 63

Query: 66  YVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSAL 111
           YVSENRSRYIVPLTFL RPEFQILLQLAEEEFGFSH MGLTIPCEEQVFR+LTS L
Sbjct: 64  YVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHTMGLTIPCEEQVFRSLTSML 117

[Close]

BLAST of MS016883 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.9e-27
Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 3   VRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSR 62
           +++++KL+Q   A++KQI+KRC SSL  K        C  +P+DVP+GHF VYV ENRSR
Sbjct: 4   MKKTSKLTQT--AMLKQILKRC-SSLGKKNGGGYDEDC--LPLDVPKGHFPVYVGENRSR 63

Query: 63  YIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR 112
           YIVP++FL  PEFQ LLQ AEEEFGF H MGLTIPC+E VF+ LTS +R
Sbjct: 64  YIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of MS016883 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.2e-25
Identity = 62/112 (55.36%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 1   MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKK-QPPPPPQCEEIPVDVPEGHFVVYVSEN 60
           MA++RS+K + +  A +KQI+KRCSS  + K        Q +++P DVP+GHF VYV  N
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPN 60

Query: 61  RSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR 112
           RSRYIVP+++L   EFQ LL+LAEEEFGF H MGLTIPC+E  FR+L S  R
Sbjct: 61  RSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

[Close]

BLAST of MS016883 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.3e-19
Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 0


Query: 3   VRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSR 62
           +R+S+K +QA    +K+I+K+CSS  ++            +P DVP+GHFVVYV E R+R
Sbjct: 4   IRKSHKQTQA--LAIKKIIKKCSSFGKNNDD-------SGLPNDVPKGHFVVYVGERRNR 63

Query: 63  YIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSAL 111
           YIVP++ L  P FQ LLQ +EEEFGF+H MG+ IPC+E  F +  S +
Sbjct: 64  YIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLSFFSMI 102

[Close]

BLAST of MS016883 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.9e-14
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 0


Query: 46  DVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRM-GLTIPCEEQVFR 105
           D P+G+  VYV E   R+++P+++L +P FQ LL  AEEEFG+ H M GLTIPC E VF+
Sbjct: 16  DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75

Query: 106 ALTSAL 111
            +TS L
Sbjct: 76  CITSCL 81

[Close]

BLAST of MS016883 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.6e-14
Identity = 34/67 (50.75%), Postives = 48/67 (71.64%), Query Frame = 0


Query: 45  VDVPEGHFVVYVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRM-GLTIPCEEQVF 104
           VD P+G+  VYV E   R+++P++++ +P FQ LL  AEEEFG+ H M GLTIPC E+VF
Sbjct: 15  VDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVF 74

Query: 105 RALTSAL 111
           + +T  L
Sbjct: 75  QRITCCL 81

[Close]

BLAST of MS016883 vs. ExPASy TrEMBL
Match: A0A0A0LRM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.1e-31
Identity = 83/114 (72.81%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 6   SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-----PPPPQC---EEIPVDVPEGHFVVYVS 65
           S KL+    AVVKQI KRCSS   +KK           QC   EEIPVDVP+GHFVVYVS
Sbjct: 4   STKLTHT--AVVKQIKKRCSSLRIAKKNKNNNNNNTHLQCGGGEEIPVDVPKGHFVVYVS 63

Query: 66  ENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR 112
           ENRSRYIVPLTFL RPEFQILLQLAEEEFGFSH MGLTIPCEEQVF++LTS LR
Sbjct: 64  ENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHNMGLTIPCEEQVFQSLTSMLR 115

[Close]

BLAST of MS016883 vs. ExPASy TrEMBL
Match: A0A5N6RBC3 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013931 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.2e-31
Identity = 78/111 (70.27%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 1   MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENR 60
           MA++RSNKLSQA  A++KQI+KRCSS    KKQ     Q   +P+DVP+GHFVVYV ENR
Sbjct: 1   MAIKRSNKLSQA--AMLKQILKRCSS--LGKKQQGYDEQ--GLPLDVPKGHFVVYVGENR 60

Query: 61  SRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR 112
           SRYIVP+++L RPEFQILLQ AEEEFGFSH MGLTIPCEE+VF++LTS LR
Sbjct: 61  SRYIVPISYLTRPEFQILLQQAEEEFGFSHDMGLTIPCEEEVFQSLTSTLR 105

[Close]

BLAST of MS016883 vs. ExPASy TrEMBL
Match: A0A5A7VD05 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005110 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.1e-31
Identity = 83/116 (71.55%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 6   SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-------PPPPQC----EEIPVDVPEGHFVV 65
           S KL+    AVVKQI KRCSS   +KK             QC    EEIPVDVP+GHFVV
Sbjct: 4   STKLTHT--AVVKQIKKRCSSLRITKKNKNNNNNNNTHHLQCGGGGEEIPVDVPKGHFVV 63

Query: 66  YVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSAL 111
           YVSENRSRYIVPLTFL RPEFQILLQLAEEEFGFSH MGLTIPCEEQVFR+LTS L
Sbjct: 64  YVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHTMGLTIPCEEQVFRSLTSML 117

[Close]

BLAST of MS016883 vs. ExPASy TrEMBL
Match: A0A1S3BB62 (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103488031 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.1e-31
Identity = 83/116 (71.55%), Postives = 87/116 (75.00%), Query Frame = 0


Query: 6   SNKLSQAAPAVVKQIMKRCSSSLRSKKQP-------PPPPQC----EEIPVDVPEGHFVV 65
           S KL+    AVVKQI KRCSS   +KK             QC    EEIPVDVP+GHFVV
Sbjct: 4   STKLTHT--AVVKQIKKRCSSLRITKKNKNNNNNNNTHHLQCGGGGEEIPVDVPKGHFVV 63

Query: 66  YVSENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSAL 111
           YVSENRSRYIVPLTFL RPEFQILLQLAEEEFGFSH MGLTIPCEEQVFR+LTS L
Sbjct: 64  YVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFSHTMGLTIPCEEQVFRSLTSML 117

[Close]

BLAST of MS016883 vs. ExPASy TrEMBL
Match: A0A067HAI1 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g047827mg PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-30
Identity = 77/111 (69.37%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 1   MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENR 60
           MA+R+SNKLSQ   AV+KQI+KRCSS    KKQ       + +P+DVP+GHFVVYV ENR
Sbjct: 1   MAIRKSNKLSQT--AVIKQILKRCSS--LGKKQSYDE---QGLPLDVPKGHFVVYVGENR 60

Query: 61  SRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR 112
           SRYI+P+TFL RPEFQ LLQ AEEEFGF H MGLTIPCEEQVF++LTS LR
Sbjct: 61  SRYIIPITFLTRPEFQSLLQQAEEEFGFDHDMGLTIPCEEQVFQSLTSMLR 104

[Close]

BLAST of MS016883 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 130.6 bits (327), Expect = 8.0e-31
Identity = 71/112 (63.39%), Postives = 88/112 (78.57%), Query Frame = 0


Query: 1   MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEE-IPVDVPEGHFVVYVSEN 60
           MA++++NKL+Q   A++KQI+KRCSS    KKQ     + E   P++VP+GHFVVYV EN
Sbjct: 1   MAMKKANKLTQT--AMIKQILKRCSS--LGKKQSNVYGEDENGSPLNVPKGHFVVYVGEN 60

Query: 61  RSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR 112
           R RY+VP++FL RPEFQ+LLQ AEEEFGF H MGLTIPCEE VFR+LTS LR
Sbjct: 61  RVRYVVPISFLTRPEFQLLLQQAEEEFGFDHDMGLTIPCEEVVFRSLTSMLR 108

[Close]

BLAST of MS016883 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 127.5 bits (319), Expect = 6.7e-30
Identity = 68/113 (60.18%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 1   MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQC---EEIPVDVPEGHFVVYVS 60
           MAV+RS+KL+Q   A++KQI+KRCSS  ++        QC   + +PVDVP+GHF VYV 
Sbjct: 1   MAVKRSSKLTQT--AMLKQILKRCSSLAKN--------QCYDEDGLPVDVPKGHFPVYVG 60

Query: 61  ENRSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSAL 111
           E RSRYIVP++FL  P+F+ LLQ AEEEFGF+H MGLTIPCEE VFR+LTS +
Sbjct: 61  EKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103

[Close]

BLAST of MS016883 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 120.9 bits (302), Expect = 6.3e-28
Identity = 65/109 (59.63%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 3   VRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENRSR 62
           +++++KL+Q   A++KQI+KRC SSL  K        C  +P+DVP+GHF VYV ENRSR
Sbjct: 4   MKKTSKLTQT--AMLKQILKRC-SSLGKKNGGGYDEDC--LPLDVPKGHFPVYVGENRSR 63

Query: 63  YIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR 112
           YIVP++FL  PEFQ LLQ AEEEFGF H MGLTIPC+E VF+ LTS +R
Sbjct: 64  YIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107

[Close]

BLAST of MS016883 vs. TAIR 10
Match: AT4G38860.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.4 bits (298), Expect = 1.8e-27
Identity = 70/112 (62.50%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 1   MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKKQPPPPPQCEEIPVDVPEGHFVVYVSENR 60
           MAV+RS+KL+Q   A++KQI+KRCSS    KKQ       E +P+DVP+GHF VYV E R
Sbjct: 1   MAVKRSSKLTQT--AMLKQILKRCSS--LGKKQCYDE---EGLPLDVPKGHFPVYVGEKR 60

Query: 61  SRYIVPLTFLARPEFQILLQLAEEEFGFSHRM-GLTIPCEEQVFRALTSALR 112
           +RYIVP++FL  PEF ILLQ AEEEFGF H M GLTIPCEE VF +LTS +R
Sbjct: 61  TRYIVPISFLTHPEFLILLQQAEEEFGFRHDMGGLTIPCEEVVFLSLTSMIR 105

[Close]

BLAST of MS016883 vs. TAIR 10
Match: AT2G18010.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.3 bits (290), Expect = 1.6e-26
Identity = 62/112 (55.36%), Postives = 80/112 (71.43%), Query Frame = 0


Query: 1   MAVRRSNKLSQAAPAVVKQIMKRCSSSLRSKK-QPPPPPQCEEIPVDVPEGHFVVYVSEN 60
           MA++RS+K + +  A +KQI+KRCSS  + K        Q +++P DVP+GHF VYV  N
Sbjct: 1   MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPN 60

Query: 61  RSRYIVPLTFLARPEFQILLQLAEEEFGFSHRMGLTIPCEEQVFRALTSALR 112
           RSRYIVP+++L   EFQ LL+LAEEEFGF H MGLTIPC+E  FR+L S  R
Sbjct: 61  RSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112

The following BLAST results are available for this feature:

BLAST of MS016883 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886317.1	2.3e-32	76.15	auxin-responsive protein SAUR50-like [Benincasa hispida]	[more]
XP_004152658.1	4.4e-31	72.81	auxin-responsive protein SAUR50 [Cucumis sativus] >KGN62666.1 hypothetical prote...	[more]
KAE8057224.1	1.3e-30	70.27	hypothetical protein FH972_013931 [Carpinus fangiana]	[more]
KAG6598492.1	1.3e-30	75.24	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008444786.1	1.7e-30	71.55	PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0065174.1 auxin-ind...	[more]

BLAST of MS016883 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65695	8.9e-27	59.63	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
Q9SL45	2.2e-25	55.36	Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR1...	[more]
P0DKL1	2.3e-19	47.22	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P33081	3.9e-14	53.03	Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1	[more]
P33082	6.6e-14	50.75	Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of MS016883 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRM7	2.1e-31	72.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1	[more]
A0A5N6RBC3	6.2e-31	70.27	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013931 PE=3 SV=1	[more]
A0A5A7VD05	8.1e-31	71.55	Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3BB62	8.1e-31	71.55	auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103488031 PE=3 SV=1	[more]
A0A067HAI1	1.1e-30	69.37	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g047827mg PE=3 SV=1	[more]

BLAST of MS016883 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75580.1	8.0e-31	63.39	SAUR-like auxin-responsive protein family	[more]
AT2G21220.1	6.7e-30	60.18	SAUR-like auxin-responsive protein family	[more]
AT4G34760.1	6.3e-28	59.63	SAUR-like auxin-responsive protein family	[more]
AT4G38860.1	1.8e-27	62.50	SAUR-like auxin-responsive protein family	[more]
AT2G18010.1	1.6e-26	55.36	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 19..110 e-value: 7.3E-26 score: 90.2
None	No IPR available	PANTHER	PTHR31374:SF242	AUXIN-INDUCED PROTEIN 15A-LIKE	coord: 12..111
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 12..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016883.1	MS016883.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin