Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCCTCGAGCTTATGTCTTAATCTTCTTCTTCTGGTCTTTCCTCACCATCCTCACTCCCGCCCTCGTCCTTCTCTCCGAAAATTCAAAATCACCGCCCCCGTCTTTCGATTCTCCCGGTAAGGACCCATTTGATTCTATATTTTGTTTCCCATATTTGATATTTTAAGTTTTGACAGTCGTTTCTGATTCTTTTATTCTCTCAAATTTTTACAGTGAAATAATTAATTTTTTTTAATAAACCATATGGCGAGTGTAGATTTGAACCGAAGAGTTGCCTGAAATAATCAAAATTAGTATGTTATATTTAGTTTTTTAAATATTTATTATGTATTTTATAGGTAAAAGAAATGATATAATAATAATTTTATTTATGTTTTAGGAAAAAAAAAACTGGAAATGAGACCGAAATCAGATTCTGTTGTTTCTGAATTTTGAATACAATTTCTTTAATAAATGGGATATGATGTTTGTAGTTTCTAGTGCTTTGTTTCTGATTTTTCTCTGCTTATTTTCTGTTTGGCAGATGGGAAAAATGGAGGGATTAATATGAGTAGGAAAGTTGTGGGGTTGACGAGAAAATATGAGATGTTGAAAGTTTTGGCCGAAGAACAGAAAGCGCCGACGGCGATTCCAATCCCGGTCACGGTACCGGTGCCGTCGCCGTCGCCGGCTCCGGCTCCGGACGCTGATTTTCCGGTTCGGAGGTTCATGGCTGGTGCTGGAAAAGTCATCTTGACAACATTAAAGGTCTTGAAAGAAGCG
mRNA sequence
ATGACCCCTCGAGCTTATGTCTTAATCTTCTTCTTCTGGTCTTTCCTCACCATCCTCACTCCCGCCCTCGTCCTTCTCTCCGAAAATTCAAAATCACCGCCCCCGTCTTTCGATTCTCCCGATGGGAAAAATGGAGGGATTAATATGAGTAGGAAAGTTGTGGGGTTGACGAGAAAATATGAGATGTTGAAAGTTTTGGCCGAAGAACAGAAAGCGCCGACGGCGATTCCAATCCCGGTCACGGTACCGGTGCCGTCGCCGTCGCCGGCTCCGGCTCCGGACGCTGATTTTCCGGTTCGGAGGTTCATGGCTGGTGCTGGAAAAGTCATCTTGACAACATTAAAGGTCTTGAAAGAAGCG
Coding sequence (CDS)
ATGACCCCTCGAGCTTATGTCTTAATCTTCTTCTTCTGGTCTTTCCTCACCATCCTCACTCCCGCCCTCGTCCTTCTCTCCGAAAATTCAAAATCACCGCCCCCGTCTTTCGATTCTCCCGATGGGAAAAATGGAGGGATTAATATGAGTAGGAAAGTTGTGGGGTTGACGAGAAAATATGAGATGTTGAAAGTTTTGGCCGAAGAACAGAAAGCGCCGACGGCGATTCCAATCCCGGTCACGGTACCGGTGCCGTCGCCGTCGCCGGCTCCGGCTCCGGACGCTGATTTTCCGGTTCGGAGGTTCATGGCTGGTGCTGGAAAAGTCATCTTGACAACATTAAAGGTCTTGAAAGAAGCG
Protein sequence
MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKYEMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA
Homology
BLAST of MS016832 vs. NCBI nr
Match:
XP_022144206.1 (uncharacterized protein LOC111013954 [Momordica charantia])
HSP 1 Score: 231.1 bits (588), Expect = 5.0e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
Query: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY
Sbjct: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
Query: 61 EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA 120
EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA
Sbjct: 61 EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA 120
BLAST of MS016832 vs. NCBI nr
Match:
XP_011649628.1 (uncharacterized protein LOC105434646 [Cucumis sativus] >KGN62609.1 hypothetical protein Csa_021820 [Cucumis sativus])
HSP 1 Score: 167.9 bits (424), Expect = 5.2e-38
Identity = 92/120 (76.67%), Postives = 99/120 (82.50%), Query Frame = 0
Query: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
MTPRAYVLIFFFWS LTILTPALV LSENSK SF+S DGKNGGI MSRKVVGLTRKY
Sbjct: 1 MTPRAYVLIFFFWSLLTILTPALVFLSENSKPSLLSFESTDGKNGGIEMSRKVVGLTRKY 60
Query: 61 EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA 120
+MLK+LAEEQ+AP IP P+T P PSP+PAPA PVRRFMA AG+VIL TLK LKEA
Sbjct: 61 QMLKILAEEQRAPPLIPTPITAPAPSPTPAPA-----PVRRFMADAGEVILRTLKGLKEA 115
BLAST of MS016832 vs. NCBI nr
Match:
XP_008444727.1 (PREDICTED: uncharacterized protein LOC103487977 [Cucumis melo] >KAA0065226.1 uncharacterized protein E6C27_scaffold82G005650 [Cucumis melo var. makuwa])
HSP 1 Score: 165.6 bits (418), Expect = 2.6e-37
Identity = 89/120 (74.17%), Postives = 98/120 (81.67%), Query Frame = 0
Query: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
MTPRAYVLIFFFWS LTILTPALV LSENSK SF+S DG+NGGI MSRKVVGLTRKY
Sbjct: 1 MTPRAYVLIFFFWSLLTILTPALVFLSENSKPSLVSFESTDGENGGIEMSRKVVGLTRKY 60
Query: 61 EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA 120
+MLK+LAEEQ+AP IP P+T P PSP+PA AP PV RFMA A K+IL+TLK LKEA
Sbjct: 61 QMLKILAEEQRAPPLIPTPITAPAPSPAPASAPGNAVPVGRFMANARKLILSTLKGLKEA 120
BLAST of MS016832 vs. NCBI nr
Match:
XP_023002554.1 (uncharacterized protein LOC111496365 [Cucurbita maxima])
HSP 1 Score: 161.8 bits (408), Expect = 3.7e-36
Identity = 87/117 (74.36%), Postives = 94/117 (80.34%), Query Frame = 0
Query: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
MTPRAYVLIFFFWS LTILTPALV LSENSK+ S SPDGK GGI MSRK+VGLTRKY
Sbjct: 1 MTPRAYVLIFFFWSLLTILTPALVFLSENSKTSSLSSQSPDGKIGGIQMSRKIVGLTRKY 60
Query: 61 EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVL 118
EMLKVL EEQ +P AIP P+T P P+PS A P P+RRFMAGAGKVI+TTLK L
Sbjct: 61 EMLKVLVEEQTSPAAIPTPITAPAPAPSTALPPGTAVPLRRFMAGAGKVIVTTLKGL 117
BLAST of MS016832 vs. NCBI nr
Match:
XP_038885597.1 (uncharacterized protein LOC120075920 [Benincasa hispida])
HSP 1 Score: 159.8 bits (403), Expect = 1.4e-35
Identity = 91/120 (75.83%), Postives = 96/120 (80.00%), Query Frame = 0
Query: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
MTPRAYVLIFFFWS LTILTPALV LS+NSK SF S DGKNGGI MSRKVVGLTRKY
Sbjct: 1 MTPRAYVLIFFFWSLLTILTPALVFLSDNSKPSSLSFKSTDGKNGGIEMSRKVVGLTRKY 60
Query: 61 EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA 120
+MLKVLAEEQ AP AIP P+T P+ SPAPA A VR+FMA GKVILTTLK LKEA
Sbjct: 61 QMLKVLAEEQTAPAAIPTPIT--APALSPAPALGAAVSVRKFMADTGKVILTTLKGLKEA 118
BLAST of MS016832 vs. ExPASy TrEMBL
Match:
A0A6J1CSM4 (uncharacterized protein LOC111013954 OS=Momordica charantia OX=3673 GN=LOC111013954 PE=4 SV=1)
HSP 1 Score: 231.1 bits (588), Expect = 2.4e-57
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0
Query: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY
Sbjct: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
Query: 61 EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA 120
EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA
Sbjct: 61 EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA 120
BLAST of MS016832 vs. ExPASy TrEMBL
Match:
A0A0A0LNM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361730 PE=4 SV=1)
HSP 1 Score: 167.9 bits (424), Expect = 2.5e-38
Identity = 92/120 (76.67%), Postives = 99/120 (82.50%), Query Frame = 0
Query: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
MTPRAYVLIFFFWS LTILTPALV LSENSK SF+S DGKNGGI MSRKVVGLTRKY
Sbjct: 1 MTPRAYVLIFFFWSLLTILTPALVFLSENSKPSLLSFESTDGKNGGIEMSRKVVGLTRKY 60
Query: 61 EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA 120
+MLK+LAEEQ+AP IP P+T P PSP+PAPA PVRRFMA AG+VIL TLK LKEA
Sbjct: 61 QMLKILAEEQRAPPLIPTPITAPAPSPTPAPA-----PVRRFMADAGEVILRTLKGLKEA 115
BLAST of MS016832 vs. ExPASy TrEMBL
Match:
A0A5A7VFX0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005650 PE=4 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37
Identity = 89/120 (74.17%), Postives = 98/120 (81.67%), Query Frame = 0
Query: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
MTPRAYVLIFFFWS LTILTPALV LSENSK SF+S DG+NGGI MSRKVVGLTRKY
Sbjct: 1 MTPRAYVLIFFFWSLLTILTPALVFLSENSKPSLVSFESTDGENGGIEMSRKVVGLTRKY 60
Query: 61 EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA 120
+MLK+LAEEQ+AP IP P+T P PSP+PA AP PV RFMA A K+IL+TLK LKEA
Sbjct: 61 QMLKILAEEQRAPPLIPTPITAPAPSPAPASAPGNAVPVGRFMANARKLILSTLKGLKEA 120
BLAST of MS016832 vs. ExPASy TrEMBL
Match:
A0A1S3BAZ8 (uncharacterized protein LOC103487977 OS=Cucumis melo OX=3656 GN=LOC103487977 PE=4 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 1.3e-37
Identity = 89/120 (74.17%), Postives = 98/120 (81.67%), Query Frame = 0
Query: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
MTPRAYVLIFFFWS LTILTPALV LSENSK SF+S DG+NGGI MSRKVVGLTRKY
Sbjct: 1 MTPRAYVLIFFFWSLLTILTPALVFLSENSKPSLVSFESTDGENGGIEMSRKVVGLTRKY 60
Query: 61 EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVLKEA 120
+MLK+LAEEQ+AP IP P+T P PSP+PA AP PV RFMA A K+IL+TLK LKEA
Sbjct: 61 QMLKILAEEQRAPPLIPTPITAPAPSPAPASAPGNAVPVGRFMANARKLILSTLKGLKEA 120
BLAST of MS016832 vs. ExPASy TrEMBL
Match:
A0A6J1KQS2 (uncharacterized protein LOC111496365 OS=Cucurbita maxima OX=3661 GN=LOC111496365 PE=4 SV=1)
HSP 1 Score: 161.8 bits (408), Expect = 1.8e-36
Identity = 87/117 (74.36%), Postives = 94/117 (80.34%), Query Frame = 0
Query: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
MTPRAYVLIFFFWS LTILTPALV LSENSK+ S SPDGK GGI MSRK+VGLTRKY
Sbjct: 1 MTPRAYVLIFFFWSLLTILTPALVFLSENSKTSSLSSQSPDGKIGGIQMSRKIVGLTRKY 60
Query: 61 EMLKVLAEEQKAPTAIPIPVTVPVPSPSPAPAPDADFPVRRFMAGAGKVILTTLKVL 118
EMLKVL EEQ +P AIP P+T P P+PS A P P+RRFMAGAGKVI+TTLK L
Sbjct: 61 EMLKVLVEEQTSPAAIPTPITAPAPAPSTALPPGTAVPLRRFMAGAGKVIVTTLKGL 117
BLAST of MS016832 vs. TAIR 10
Match:
AT5G42785.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 41.2 bits (95), Expect = 6.9e-04
Identity = 27/85 (31.76%), Postives = 45/85 (52.94%), Query Frame = 0
Query: 1 MTPRAYVLIFFFWSFLTILTPALVLLSENSKSPPPSFDSPDGKNGGINMSRKVVGLTRKY 60
M RAYV+IFFFW+ LTI+TP LV S++ K+ PP + + K + R+++G + +
Sbjct: 1 MKGRAYVMIFFFWALLTIITPMLVSWSQSLKNLPPLSNDQEQKIKD-SGPRRMMGYSEEM 60
Query: 61 EMLKVLAEEQKAPTAIPIPVTVPVP 86
+ + + + P P P
Sbjct: 61 HLAQEFVSHVEEEKLMMEPSMAPTP 84
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022144206.1 | 5.0e-57 | 100.00 | uncharacterized protein LOC111013954 [Momordica charantia] | [more] |
XP_011649628.1 | 5.2e-38 | 76.67 | uncharacterized protein LOC105434646 [Cucumis sativus] >KGN62609.1 hypothetical ... | [more] |
XP_008444727.1 | 2.6e-37 | 74.17 | PREDICTED: uncharacterized protein LOC103487977 [Cucumis melo] >KAA0065226.1 unc... | [more] |
XP_023002554.1 | 3.7e-36 | 74.36 | uncharacterized protein LOC111496365 [Cucurbita maxima] | [more] |
XP_038885597.1 | 1.4e-35 | 75.83 | uncharacterized protein LOC120075920 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CSM4 | 2.4e-57 | 100.00 | uncharacterized protein LOC111013954 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A0A0LNM8 | 2.5e-38 | 76.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361730 PE=4 SV=1 | [more] |
A0A5A7VFX0 | 1.3e-37 | 74.17 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3BAZ8 | 1.3e-37 | 74.17 | uncharacterized protein LOC103487977 OS=Cucumis melo OX=3656 GN=LOC103487977 PE=... | [more] |
A0A6J1KQS2 | 1.8e-36 | 74.36 | uncharacterized protein LOC111496365 OS=Cucurbita maxima OX=3661 GN=LOC111496365... | [more] |
Match Name | E-value | Identity | Description | |
AT5G42785.1 | 6.9e-04 | 31.76 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |