MS014198 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATATCATGTTTTGGCAGAGGAACTTCCATGTCGATTAAGCTGCTGGTGCTTGAAAACTTTCCTGGAATCAATGTTACTCTTTCACATCATCCTCCAGATTTGACAAAATATCTTACGACAAAATTTATATCAACTGCACAAGTACTGATTATTATCATAGTGATGGCTGGTGGATATATTCTTGCCGAGATGAGAATGCCAATACCTCCTTGGTACCATCGTTTGGCCGCACACAAATTTTTTGTCATCGCAATCCCTTGGCTTCTGGGCAGCATAGCTATAAACTACCTCCAAAACACTGAGCCCTTTGAAGTTTACTTCAATGATGAACTGGTACTGAAC ATATCATGTTTTGGCAGAGGAACTTCCATGTCGATTAAGCTGCTGGTGCTTGAAAACTTTCCTGGAATCAATGTTACTCTTTCACATCATCCTCCAGATTTGACAAAATATCTTACGACAAAATTTATATCAACTGCACAAGTACTGATTATTATCATAGTGATGGCTGGTGGATATATTCTTGCCGAGATGAGAATGCCAATACCTCCTTGGTACCATCGTTTGGCCGCACACAAATTTTTTGTCATCGCAATCCCTTGGCTTCTGGGCAGCATAGCTATAAACTACCTCCAAAACACTGAGCCCTTTGAAGTTTACTTCAATGATGAACTGGTACTGAAC ATATCATGTTTTGGCAGAGGAACTTCCATGTCGATTAAGCTGCTGGTGCTTGAAAACTTTCCTGGAATCAATGTTACTCTTTCACATCATCCTCCAGATTTGACAAAATATCTTACGACAAAATTTATATCAACTGCACAAGTACTGATTATTATCATAGTGATGGCTGGTGGATATATTCTTGCCGAGATGAGAATGCCAATACCTCCTTGGTACCATCGTTTGGCCGCACACAAATTTTTTGTCATCGCAATCCCTTGGCTTCTGGGCAGCATAGCTATAAACTACCTCCAAAACACTGAGCCCTTTGAAGTTTACTTCAATGATGAACTGGTACTGAAC ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNTEPFEVYFNDELVLN Homology
BLAST of MS014198 vs. NCBI nr
Match: XP_022148433.1 (selT-like protein [Momordica charantia]) HSP 1 Score: 220.7 bits (561), Expect = 6.5e-54 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of MS014198 vs. NCBI nr
Match: PKA63308.1 (SelT-like protein [Apostasia shenzhenica]) HSP 1 Score: 107.1 bits (266), Expect = 1.0e-19 Identity = 52/114 (45.61%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of MS014198 vs. NCBI nr
Match: XP_020252680.1 (LOW QUALITY PROTEIN: selT-like protein [Asparagus officinalis]) HSP 1 Score: 102.4 bits (254), Expect = 2.6e-18 Identity = 50/113 (44.25%), Postives = 75/113 (66.37%), Query Frame = 0
BLAST of MS014198 vs. NCBI nr
Match: XP_020593214.1 (selT-like protein [Phalaenopsis equestris]) HSP 1 Score: 101.7 bits (252), Expect = 4.4e-18 Identity = 50/114 (43.86%), Postives = 76/114 (66.67%), Query Frame = 0
BLAST of MS014198 vs. NCBI nr
Match: KAG9453466.1 (hypothetical protein H6P81_006370 [Aristolochia fimbriata]) HSP 1 Score: 101.7 bits (252), Expect = 4.4e-18 Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = 0
BLAST of MS014198 vs. ExPASy Swiss-Prot
Match: Q9STZ2 (SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2) HSP 1 Score: 83.2 bits (204), Expect = 2.1e-15 Identity = 44/115 (38.26%), Postives = 71/115 (61.74%), Query Frame = 0
BLAST of MS014198 vs. ExPASy TrEMBL
Match: A0A6J1D431 (selT-like protein OS=Momordica charantia OX=3673 GN=LOC111017081 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 3.1e-54 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of MS014198 vs. ExPASy TrEMBL
Match: A0A2I0B679 (SelT-like protein OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash017777 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.0e-20 Identity = 52/114 (45.61%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of MS014198 vs. ExPASy TrEMBL
Match: A0A5B7BDY4 (Putative selT-like protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_035879 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 6.2e-18 Identity = 51/114 (44.74%), Postives = 78/114 (68.42%), Query Frame = 0
BLAST of MS014198 vs. ExPASy TrEMBL
Match: A0A314XXS3 (SelT-like protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_02303 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 6.2e-18 Identity = 52/112 (46.43%), Postives = 72/112 (64.29%), Query Frame = 0
BLAST of MS014198 vs. ExPASy TrEMBL
Match: M5WCM6 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G055700 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.4e-17 Identity = 51/114 (44.74%), Postives = 74/114 (64.91%), Query Frame = 0
BLAST of MS014198 vs. TAIR 10
Match: AT3G47300.1 (SELT-like protein precursor ) HSP 1 Score: 83.2 bits (204), Expect = 1.5e-16 Identity = 44/115 (38.26%), Postives = 71/115 (61.74%), Query Frame = 0
BLAST of MS014198 vs. TAIR 10
Match: AT5G58640.1 (Selenoprotein, Rdx type ) HSP 1 Score: 81.6 bits (200), Expect = 4.4e-16 Identity = 41/115 (35.65%), Postives = 73/115 (63.48%), Query Frame = 0
BLAST of MS014198 vs. TAIR 10
Match: AT5G58640.2 (Selenoprotein, Rdx type ) HSP 1 Score: 81.6 bits (200), Expect = 4.4e-16 Identity = 41/115 (35.65%), Postives = 73/115 (63.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|