MS011885 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAAAAGCCGTCCGGGACCAAGCAAGCATTTGTTCTCTTCGGAGCTTTAGCGTTGGGTTGGCTCGCCATAGAGATGGCTTTCAAGCCCTTCCTCGATAAGGCGCGCTCGGCCATGGACAAGTCTGATCCCACTCGGGATCCCGACGACCTTGTCGATAATCTATCTGATCACAGGCCATCCGATGACGATGAGTCTACCACTGCT ATGGGAAAAAAGCCGTCCGGGACCAAGCAAGCATTTGTTCTCTTCGGAGCTTTAGCGTTGGGTTGGCTCGCCATAGAGATGGCTTTCAAGCCCTTCCTCGATAAGGCGCGCTCGGCCATGGACAAGTCTGATCCCACTCGGGATCCCGACGACCTTGTCGATAATCTATCTGATCACAGGCCATCCGATGACGATGAGTCTACCACTGCT ATGGGAAAAAAGCCGTCCGGGACCAAGCAAGCATTTGTTCTCTTCGGAGCTTTAGCGTTGGGTTGGCTCGCCATAGAGATGGCTTTCAAGCCCTTCCTCGATAAGGCGCGCTCGGCCATGGACAAGTCTGATCCCACTCGGGATCCCGACGACCTTGTCGATAATCTATCTGATCACAGGCCATCCGATGACGATGAGTCTACCACTGCT MGKKPSGTKQAFVLFGALALGWLAIEMAFKPFLDKARSAMDKSDPTRDPDDLVDNLSDHRPSDDDESTTA Homology
BLAST of MS011885 vs. NCBI nr
Match: XP_022155586.1 (outer envelope membrane protein 7-like [Momordica charantia]) HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of MS011885 vs. NCBI nr
Match: XP_038888886.1 (outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888887.1 outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888888.1 outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888889.1 outer envelope membrane protein 7-like [Benincasa hispida]) HSP 1 Score: 121.3 bits (303), Expect = 3.3e-24 Identity = 61/70 (87.14%), Postives = 64/70 (91.43%), Query Frame = 0
BLAST of MS011885 vs. NCBI nr
Match: XP_023553591.1 (outer envelope membrane protein 7-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 116.7 bits (291), Expect = 8.1e-23 Identity = 59/70 (84.29%), Postives = 62/70 (88.57%), Query Frame = 0
BLAST of MS011885 vs. NCBI nr
Match: XP_022963695.1 (outer envelope membrane protein 7-like [Cucurbita moschata] >XP_022963696.1 outer envelope membrane protein 7-like [Cucurbita moschata] >XP_022963697.1 outer envelope membrane protein 7-like [Cucurbita moschata] >KAG7011240.1 Outer envelope membrane protein 7, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 114.4 bits (285), Expect = 4.0e-22 Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of MS011885 vs. NCBI nr
Match: XP_022967520.1 (outer envelope membrane protein 7-like [Cucurbita maxima] >XP_022967521.1 outer envelope membrane protein 7-like [Cucurbita maxima]) HSP 1 Score: 113.2 bits (282), Expect = 8.9e-22 Identity = 57/70 (81.43%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of MS011885 vs. ExPASy Swiss-Prot
Match: Q9SVC4 (Outer envelope membrane protein 7 OS=Arabidopsis thaliana OX=3702 GN=OEP7 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 2.1e-13 Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 0
BLAST of MS011885 vs. ExPASy TrEMBL
Match: A0A6J1DS29 (outer envelope membrane protein 7-like OS=Momordica charantia OX=3673 GN=LOC111022685 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 9.6e-30 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of MS011885 vs. ExPASy TrEMBL
Match: A0A6J1HGS4 (outer envelope membrane protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111463949 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.9e-22 Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of MS011885 vs. ExPASy TrEMBL
Match: A0A6J1HUQ5 (outer envelope membrane protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111467002 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 4.3e-22 Identity = 57/70 (81.43%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of MS011885 vs. ExPASy TrEMBL
Match: A0A5A7URM9 (6.7 kDa chloroplast outer envelope membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00570 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.1e-21 Identity = 55/68 (80.88%), Postives = 60/68 (88.24%), Query Frame = 0
BLAST of MS011885 vs. ExPASy TrEMBL
Match: A0A0A0KJE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409970 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 6.7e-15 Identity = 48/69 (69.57%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of MS011885 vs. TAIR 10
Match: AT3G52420.1 (outer envelope membrane protein 7 ) HSP 1 Score: 75.9 bits (185), Expect = 1.5e-14 Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 0
BLAST of MS011885 vs. TAIR 10
Match: AT3G63160.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: outer envelope membrane protein 7 (TAIR:AT3G52420.1); Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.1 bits (118), Expect = 8.6e-07 Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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