MS011876 (gene) Bitter gourd (TR) v1

Overview


Name	MS011876
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	mediator of RNA polymerase II transcription subunit 33B-like
Location	scaffold1150: 158757 .. 174361 (+)
RNA-Seq Expression	MS011876
Synteny	MS011876

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATGGGACAGTGTGTTGGAGCTTACGAAGTCGGCGCAGGACAAGAACTGCGATCCACTGCTCTGGGCGGTTCAGTTGAGCTCCAGCCTCAATTCTGCTGGCGTTTCCTTGCCGTCAATCGAGCTCGCCCAGCTCTTGGTCTCCCATATTTGTTGGGACAATCATGTGCCTATCATGTGGAAGTTCCTTGAGAAGGCAATGACTGCGAAAATCGTTCCTCCCCTGCTGGTTGTTGCTCTTCTTTCTACGAGGTCTCATTTCTTCTATCAATTTGATTACTACCGCTCCCCTCTTCAAGCTTCCTCGCTTCATCGAATTTTTGTTTAAATCTTATTCACGGGTGTGTTTGGACGTTGTGAATGCAGAATGTTTCATATTGGGGGCTTGTGAATTACGCTTTTTCCGGGGTAGTTCAACTTCAAAGTAATATTTTGAGTTCGCTTATTTTTCTCCTGTACACGTACGGTTAGACCATTGTGAACTTAAGTTATGGAGCATAAAGAAAAATGGAACTGAAGATAATACATATGCATTTCAACATTCATACGTCTCAATGCATCCATAGATTTCCTGCGTTGCTCTGTAATTGCCTTTCTGCTTGCATGTCATCAATAATCTCGTTGTGCTGTAGTTATCTACTGTTTTTGATAAGCTGTAGTTATCTACTGTTGATAGCAAGTTCAAGTCTGTATCGTATCGGTTGTCGTTTATCCAATAAATAAGTTTGCATAAAATACTGACGTGATTTTTGAAGATGTCTGCAACTTGTTAACATTTTATTTTTCTTCCTCATTTTTGCTTCTAACTTTGTTTCGCTTGTTTTTCTCGTCCACTATTCACTGTCCAAAGTTGACATATATGGCATTGTTTCTCTGATTTACTTCAGGGCAATTCCGTATAGAAAGCTCCGACCTGCAGCATACAGACTTTACCTGGAACTTCTCAGCCGACATGTCTTTTCATCAACATCGCAAATCAACGGACCCAATTATCAAAGGTATATTTGACTGTATTTTTATTCGTTTGCATAATAGTGGATAACCTCATTCTTTCTTTTACTCTATTCAATCATTTTTCTTTCTTAATGGTAAACCTAGAGGAAACCTTTTGCCTCGAGAGGCATTCGAGGGTATCCTCTGTCACTGCTTCTCCTTACTTCAGTGGCAGATTATTTAGCTAATAAAATTTACCCTTCTCTTTTGAGGTTCTTATTTTTCCTGTCTTCTTATTTGAGTAGATCTTGTCCTCTATTTTTTTTGTCAGCTATATTTTGCTTAATAAGAAACTAAATTCAATGAAAAAAATGATGTTTCAAAAAACTCTTCCAAGTGGCATAAAGAGTATTTAAGTTTGTAGTTATTAGAGGTCATAAAATTTATGACAAGAAAGAGCCACAAGAGTGAACTGGAAAGAAAAAAATCAAGAGACTTTCTTTGTTGTTGAAGATTATGCGGTTTCTTTCCAGCATAATTGGTAAAATAATATTCTAACAAGCTGCAACCAAAGGGCTTCCTCTACTTTCTTTGATGGATGACGATCAAGCACCGAGAGAGAAGATTGTTCATCTTGAGGGATAGAGTAACCCGTCAACTGAAGTTGAGGAGCATAAAATTTCAAGAATTCTGACTAAAACAAAAATTTAGGGATAAATGGCTTTGAGTTGCAGCGTCATTCTTGCACATAGTGCACCACCACAGAGAGGGATACTAGTTGGGGAGTCTATTTTGAGTCTTGTCATGAGTATTGATACCCTCATGAGCAAGCTCCCATTAAAAGAAAAGAACTTCACTTTCTTGAGATTTTAGAGCACTTTCTTGAGATTTTAGAGTGCCTGATCACCTTATAAAGGCCAGGGTTCTACAAGTTTCCTTTTTCGGTGATATCCTCAAACAAGGAAATGCCTGGTGAAAATTCCAGTAACAATCATCTCTGCAATTTTTTTTTTTTTGAAACAAGAAACAAACTTTTCATTAAGGTATATGAAACGAAGTAGAAGTGTTCAAAGATACAAATTTCTGAAGGAATGAAAAAGTAGATGCTGTAAAGTAAAATTAAACAAAGTAAGACATCAATTAAGGTACTAAGAAGCGCTCCCAAGAGGAATAAATTGTAGAAATTGAGTAATCCTTGAATAACAGTGAAAGCGAGCACCAATGAGAATCCTTAAACTTGGCTTGATCTTTTTAATCATCTTCCTTTATGAAAGTTATGATTCCTTAAAAAAAATTCTTAATTACCCTCTGAACAATAATGAAAGAGTATTTCAACTTTATCGTGCCATGATGTTTCATCATCTGCCGACCAAATTTTTATTTTATTCAACTGGAGGAAAAGGCCTGATGAATTATTTTATGCCATTTCAGGATCATGCAAACCATCGATGATGTCCTTCATTTGTCCCAGATATTCAGTCTCCAAGCATGTGAACCTGGGCTACTTATGGTTGAATTATTCTTTTCAATTGTGTGGCAGTTACTTGATGCATCATTGGATGATGAAGGATTGCTGGTACTTCCTGCAGAAGAGAGATCAGCCTGGTTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCTTTCAGTGAGAAGAGAACTGAGAACAGTGAAAGTTTGCTTAAAGTAAACACGGCAAAGGCTATCGAGATAATTGGACAGTTTCTGCAAAATAAAAAAACTGCAAGGATTTTGTACTTGGCCCATCGAAATATGTAAGAAGTATAATTCTTGCTAACCTCTTTTACTCTCTACCCCTGTATTCTTTAGTTTCTGAAGGAAAGACAAGCGTATTGATCTTTAGAAAGGCCATGCCTTCAGTTGTTGGAGTAACGTTTACTGATTCAGTGTAAAATGAATCCAAAATTTTGGAACAGTTCAATGAAAAATATGTAACATAATTATGCTATCTGGTTTTTAGGCCATTGCACTGGGCAGGTTTTGCTCAGCGGTTACAACTACTTGCAGCAAACTCAGCAGTTTTGAGGAACACAAAGCTAATAACTCCAGAGGTCCTTCTGCACTGGACATCTGATAAACATAGGCTTTTATCACGAGAAGGAAAAACATCTCAGCAGGAGTTTCGTAATGTAATGGCTTCTGGGTCACTATTTTCTTCCGCCGGTCAATCTCATGGTGTTAATTGGTCCACATTGTGGCTTCCCATTGATTTGTTCCTGGAAGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTTATTTGTATGAGCTAAAAATTTTTATAGTTCTCTAGTGATTCTTGAATTAAATTGATAAGTTTCCACAAGAATTCTATTGATCCAGAGTTATCTACAGGTTTGATTAAATCTTTGCAGGCAGTTAATGATACCTCCTGGCACAACACTTTTATGGGTTTGTGGATTGCAGCCTTGCGACTTATTCAAAGGGTAGGATCAATTAGTATCTTGATAAATGTATCAAGTTTAGCTGTTCCCATCCTCTTTATGTTCAGATATTAATTTTTGTCTGAAATGATTTCACATTCACAATTTACTTAATTAGCTGGCCTGTTGTCTTTAGTTGAGAAAACTTTGATTTTTGTCCTATGATAATTGTATGGCAACTTTAATTAAGGGAGATGGATAAAAAAAGGAGCATTGTGTGGGTTTTTGGTTTTTTTTTTTTTTAAATAATTTTTTGGACTCTCTGGTCTAAAGATATTTGTAACTACTCTCTCTATGCTCTTAATCGGATAGAGATCTCTCTTATAACTCCTCAATCTTCTCTTTTCTAATGAAATGTTCCCTCTGTTTCTAATTAAAAAAGGGAAAAGAATATTTGAGTATTTATTTCCTCTAGGAAATGAGTTTTATCTTTATTTCATTTAGGAAACTAAAAAATTCATGTTTAATCTGCCTCCTGGGATCTAACTCATTCCAACCTACATATATATGCTAATTATTATCATTCTTTTTAGGAAAGGGATCCTAGTGAGGGTCCTGTACCTCGTTTGGATACATGCTTGTGCATGTTGTTGTCTATTACAACCCTAGCAGTCACCATTATAATTGAAGAAGATGAAGGTGAACTGAAGGAGGAGGATGAATGCAGCCCAAGTAAAGGCAGAGATGAGAAGAAGTGTTCAGGAAAGTGCCGCAAAGGTTTGATTACGAGCCTGCAGATGTTGGGTGAATATGAGGGCTTGTTGACTCCTCCTCAATCCGTTACTGCAATAGCCAATCAAGCTGCTGCAAAAGCAGTAATGTTCATATCAGGGGTTGCAGTTGGCAACGAGTACTATGACTGTGTTAGTATGAATGACACGCCAGTTAATTGTTGTAAGTACTTATTCTAATTTTAGCATTTAACATTGGTTATACGAATCCTGTAAAAAAATGGCCTATTAAGGATTTAAATTGGTGAAATATTAGCATTCTTTTGAAACTACTAAACATAGTTAAATGAGCTATTCTATATAAAAAAAGTTGTCTCCTCTGTGGAAAAAGATAATGTTAAATGGGCTAATGTATATTGATTCATCTGCAAATGCAAACTTTTAGATTGATGCTCGATTTCTCAAGAATTCTTGGGAATAGAATTCTGTTATAAAAATTTAATCTTCACAAAAGGACATTATTGACTTCATGCTCAGATTGGTTTGATTCAGTAGTCAGCACTATTTCATCTGCAAGTTCAAAATTTTTTTTTGAAGTTCAATGTTTCAAGAATTCTTACTAATGCAATTCTGATAGATAATTTATGTACAACGAAATGCATGCTCAGAACTATTTGATAGACCTCCGATCATAAAGAAATACGTTAGGAGGAATGGTAATAAGGGAAGGAAGAATATTTCTGTGGGCCCTAATTAGTTAGAAGACGTTTTGAGTAATGAGAGAGTTTGTTATAGAGGTATGGGAGTTTGTTACAGAGAGAGTAAGGCTGTTATAGATATATATAGGTGTTGCTCTTGAAGAGGGGATCATCTTTTTGCTAGCTTGTATTTCCGTGTAAGGAATTGTGGGAGAGAATAGGGAGCTCTCAAATACTCCCTTGACCTGTAATTTTCCCTCTTGTACCTAAATAATAGAGCAGCCTCTATCACTATTTTATTCATTACTTGGAACTCCTGGTCTGCTATAAACAATTTAATCTTTCATAAAGGACAATTGAACGTATCCTGGACATTTTTATTCAGTGAACAAGTTAAAAAATTTTGGGGTACAGATTGACCTGATGTATTATACTGGTCTTTGTCATCATTTACATGCATCCTGAATTTTTTTTATTTTTTTACTGGCACTTCTGATCTTAGAACTCTCTTGCACACATTGTTACAATATTTTCATGCTTGCATACGTTTGTATTGGAAATTTATCATTTTGTGATTGGCTAATTTGTTGTTTTCTTGTTGCAGCTGGAAATATGCGTCATCTAATTGTTGAGGCTTGTATTTCTAGGAACCTTCTAGATACATCAGCATATTTTTGGCCAGGCTACGTGAATGCACGCAGCAGTCAAGTGCCTCGTAGTGCATCTGGTCAGGTTGTTGGTTGGTCATCATTCATGAAAGGATCCTCTCTAACTCTGTCAATGGTGGATGCTTTAGTGGCCACTCCAGCTTCTAGGTATGCTCTTACATGTATCTGTTTGTATCTTGTCATTATGCCATATTGACGGAAGATGTGAATAGGGTCTGTATTTTCTGTTTCCCAAAGATGTGTGAGCTTTGTTACTTGTAAAGTTGTCATACTGGGACTATCATGTGGCAATGTTGTCCTTTCTCTGACGATTGCTTTTACATAGAAAACAGTGATGACTAATATTTTAATGCAATGGGGACTAAAATTAGAGGATACCACTTTTGCAACAAGGCCGCCTTTTAGATTCGTTGTGCATGACCCCTTGAAAATGTTGGGGTGGTGGTCATATAGACCTAGGTTTGTGAAGGTTGAGAGCAAAACTTTTAGGATAGGAGTCAACACTTCATCCAGGGGAAGCGAGGCGAAGGTAACATAAATAAGGAACAATTCTTACTCGATTTCTCTGGATGGGGAGACTTTGGTGTGTGCAAGAGCGAGGGATTTGACCGAGAACAAACCTGATTTTTCTAAATCGCAACGGATTTGATTACGTTGATTTGAGAGTGATATCAAACTCAACGAAGAGAGAAGAGCTAGGAGCTGTTCAGTTTCAACTTCTTTAAGACTTCTACGTGCTTCAATATTCCAAGAGAGAGTATCCTTATCCCAACAGTCAACAATATAACAAAAAGGGAATTTAATAGCTCTGTATAAGTGAGCGAAATGGTCCTTGAGCTTTGAATTTTCGAGCCAAACATCCTGCCAAAAAAGAATATGAGTGCCACTGCCCACAATGAAGGAGCAATTATGTTGCACTTTACTCCAATGTTTGGGAATATTGAAGCTTGGTCTCTATTCTGGAAAACTAACATTCTGGATTCACAAGGTTTCGCTTGTAGCATTTCACTATAGCTACTTAGAAAAATCCACCTGAGATCGTTTACTTGAAAGGACAATCCTTTCCTGAGAATATCTTATGTTTGGGATACTTGAATTCTTGATGTGAATCATGAATGTGCTAAAATCTGTTAGACAGGTTTCTATAAAAGTATTTTGTTACTCGGGAGTCGGGTGCATAATATTTTTTTGAACAAGATGTGAAGTTCTTATTGATTAATGAAAATGAACAAAATATTTAAAAGATACAATCTCCTAGAGGGAGAGAAAGAAAACGGAAAAACAGAAAAAAAAAGGGAAAAATAATAATAAAAAAGGAAAATACAACCCAATTGAACAAGAGCGACATAAAATCAACTTCAAGGAGCAATATCAGGTGAGAAGCATGGGAGAAACCAAAAAACTTCAAAAACAAATCTTGGAGCACCATAGGATTTCAAAATACTTGGACAGAGAAGAATCCGAAGGAGGAGAATCCTCCAAAGCAAACTTTAATTCATTCAATTCCTTCAAGTAATCTTTAAGTATCTGAATCCTCCTCTCAAGATAAGAAAGATAATAGACGTATTTTTCTTCATGAATGCTAGCTAACTCTTCATTTAGAAAGGTGATATAGTCATCCAAACGGGATGCAGTGCATAATATTAGAAGTTTTTACTCTCCCACTCCTCCCCCTCCCCTTGATGAGCTATTTTCTTTTGTGGAAAAACTAGCTTTCTTTGGGAAAATGATGTAATACAAAAGAGGATAGCCCATGACAGTAGCCTACTGGAACAAAAAAACAACTACTTAACTACAAGAGTTAAACACTGCAGGAAAAGGCTCCTTCAATTAACAAGGATGAGAGACAACTGAAAAGCATTAAAATCCTTATCAACAAAGCCCAAAGGAGGGAATTGAACCTAGCAAATGCCCAAACCTCTGTCAAGAGATCTCCACACCTCTAAATATTTTGTTTCATTTATCTTAATGAAAAGTTCTGTTTCCTATAAAAAAAGTATTTTTCTATTTCTTTCATGCCAAATCTTCCATTAGACTGAAAATAAGTGGCCTGCAAAGGAGCTGTCCCCTTTCCCCAGAAGGAGGGTGAAATAACAACTCATCTATTACAGACCAATATGATCTACTCTGAGCTAGCTGCATGCCAAAAGTATCCAAAAAACTGTCTCGTATAGCACCTGGAAAAATGAATGCCTTAAATATGCCCCAACTCCTCCAAGGCACCTTTACAGACTGCACTATGAAGCTGCAAAAGAAAAGAAGACGATCTCTGCAAATCATCCATGGTATTACTTGTCTTGTGAGAAACTTGACAGGAAAAAATATTGGTTTCACAAAAGAGAGAAGGAGCTGCAAGAAAACTAGGAAAGTGAAACCACAAACAAACATCTTGTAACCTCTAGGTGAGGAGAGAGATTGGGCAGCAAAGAAAGCAACATAGAGACATTTGAAGACTCCCTATCATATAGAGGATGCCCAAAATCGAAATTGTATGAGAGGGAGTTCCTAGAAAAAAAAGAATAGAATTCACATAAGCGAACTTCAAAAAGGATAAGTGGTAAAGATAAAGAAACATAAGAGGAAGGGGGTATCTTCTATCCAACAATCATCTTAAAAAGAGTTAAAGACCCACGTTGAGGAGAACCTCAAGAATATGCGCCCAAGAAGCAGTGTATTTCCACAGGTTTTATAATGTGCCTTTAACCCTTGGCTAGAAACCTAATTTTTGTTTCACTGGAACTCACACTTGGATCTTTGGAAGGAGAATTATAATGTCAAATATAGATTGTAATATAATTCTAATAGAAACTCATAAGAAACAATTTGACGAATAAAAATATATGGGAAATCATTGTAATTCGTTTATGATTTTTTATCTACGACATAAGCCATGTACATCAGATGCCTTGTAATTTTACCCAGTGGTTTGACAATTAAATTTAACTTACACCCATGGATTTGACGGAAGCTTAGCAGAGATTGAGAAGATCTATGAGATTGCAGTCAATGGTTCAGGTGACGAGAAGATCTCTGCAGCTTCCATTTTGTGTGGGGAATCACTTGTTCGTGGTTGGAATCTACAGGTGAGTGCCAGTGGATGCCTATGATTTGTATGGCACGGTTGTGGTTTTTTTTCCTCCAATTTTTCTAAACGTAATTTTGCATCCTCATTCTCACCTTCTGGGATTATTTTAACCTATTTTCTTCTAGGAACACACCGTTCTATTTATTGCCAGATTATTATCGCCCCCAATTCCTGCAGATTACTCTGGCAGTGATAGCTATTTGATCGACTACGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGTGTGCAGATTTTTTCCTTGCATGGCATGGTAAGAATGTTAGCTTGTCTGCATATGACCCTACTTATAAGCTTCTGAATCTGAAGTTATGTTTTTCTATAAGATTATTTGTGCAAGCTTAGGAGTGGTATTATATATGATCTTATGCCTAAGTATGAGAGCTGAATTGTTTCAGAGAAGTCTTGGAAGGATTGGATACCTGGATTTTGATAGGTGAGACTGAGGCCCATTGGCAGAGATCAAAATGACTACAGTTCATTATAAGAGCATTTAGATAATTATTTGATTAGAATTGTGTTCAATTATCTATAACCTTGTTGAATGATTCTGAAAATACTAGATTTTTGGCACACACAAGAGTTTTAAAGGGATGATTTAACAAAGCAATTGAGAAATTCTGGTTTTTATAGTGTTGTGAGCTTATATTTTTTGTTGGTTGATGCCAGGTTCCTCTGCTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCAAGTCCGCCAAAGTCATGGGTCCTTACATCTGGGGAAGAGCTTACTTGTCATGCAGTATTCTCCTTGGCATTTACACTTCTGCTAAGGTTGTGGCGGTTTCATCACCCACCTGTTGAAAATGTGAAGGGAGATGCACGACCTGTGGGATCTCAACTAACTCCTGAATATCTGCTATTGGTTCGAAATTCTCAGTTGGCATCTTTTGGAAAGTCGCCCAAGGATAGATTTAAAGTTAGACGGCTGTCAAAACTTTTGAAATTTTCTTTAGAACCTATATTCATGGATTCATTTCCAAAATTGAAGGGCTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCTCTCTGGTCTTGTACCCGGGGCACCTGTTCATCAAATTGTTGATGCACTCTTGACTATGATGTTCAGGAAGATAAATCGTGGTGGACAGTCTTTGACTTCGACAACTTCAGGAAGCAGCAACTCGTCTGGATCTGCAAATGAAGAAGCCTCCATTAAGCTTAAAGTTCCTGCATGGGACATTCTCGAGGCAACTCCCTTCGTGCTGGATGCTGCTCTTACTGCTTGTGCTCATGGGCGATTGTCTCCTCGTGATTTGGCTACAGGTAAGTCCAAATCATTTTTTTAATACGAAAAATGAGAGGTTAATCTATAATTTATAATATTGAATTCTACATGTTGGGGAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACAAGATACGAACTTTTCATTGATGTGATGAAAAGGAACAAAATTTTTCAAAGATACAAACTCTCGAAAGAGTGAAAAGTAAGACAAAAAACAGAAAATACAATGAACTACAAAGAACTAATAAAAGCACCCCAACTGTTAAAAATAAGAAAAAGGAATGGGGAAATTCTTTTTAGACTGTACCATTCTTGATGTTTGAATTTAGAATTGACCATTTATTGTGATTTGTAATTAAACTGGGTGTTTAAATATCATAAGTTCACTCCGTAAACAATAAATTAGATCATTAATACCAAAAAAAAAGTTTGCATCATCTCCCTCTCCATCTCCCCTCATTAATATTACAAAAGAACCCTCTCAACTTATAAGTGGATTGTCAATAACATAAAATCCTCTCTCTTGTTGGTGATATACTGATATTATCGTCAACTGAAAACGCCTCAAGATGAAATTCAAAATGGGAACGAATGACGTGGTGATCAGAGGAGATGCCTACCATCTAAAAAGTTGTGCTTCCTTGCGATCTCTTTCACATAAAATCCTCTCTCTTGTTGCTGATATAATTTTATATACTCTTGTAACCAAGCTGATGGGTCGAAAGTTAGTTATGGAAAAGGCTTCAGTTTTTCTTAAGAATGGAGCAAATGTACTAGTTCTTTAGGCATTTATTGATGATAAACTTTTAAAAAAATTGTGGAACATTGCTAACATTCCATTCTTGTTGGTGTTCCAAGATTTAAATTTTTGTTCCTTTTTTATATAGGATTCACCTGTGAGGCCACACAGACTCTGAGCTTTCAAATTTTCCCAAAGTTTTTGGCAGCTCAAAGATCTCATCTTCAAAGACCTCTCTGACCACTCCTTATTAGCTTGAGAGAGAAGGATTCTGTTGGATGCTCTCTAAGACAAATTGTCATACTTTAATTTCTTAGGAAGCTGCTGGTAGTAGCGTATGGCCTCCCTAATCGACCCTCTTCTTAACCATTGGATTTCTCCCACCTTGAGGTTCCTTAGATGAAACCAAATTCTTTCTTGACGAGCCCAATCCATGGAAAAACTTAAATTTTCATCTCCCTCCAGCCATTGTATTGAATCTTAAATCACATCAAATTGCATCCAAGGCATCTCACGGATCTTTCTTGCTGTTAGAATGCCCTTGCTCCTTACTATCATGTTCATAAATGAGAAATCTTTATTATCAAATCTTTATTCAGTCTTTATTATCATTATCATCATCATTATTATTATATAAAGCACCAAATTTCGTTAAGATAAATGAGAAATAAAAAACAAAATATAGTTAAAAAGCACAAGCCTACTTTTACTACTTTTACTACCTAGACTTTAAAATCATTGGAGACAAATTTTATAGAATAACTCAATCCTATTGGTGATAATTTAGTGATAATTGAAGTGATATTGAGGATGTTCTAGAATTTTTATTTAAGTGGTAATTAACAGGTGAATTCTTTTTATAATTTTATATAACTATATTGTGTTTAGCAACACTTGATCATATAAATTTTAGATTTGTATAATTTTTTTAATTAAAAATTGAAGCTGATGCCTCATACCGCCTCGAGGCTTATGCCTCGCCTCTTCGAGAGGAAAAGCCTCGAGGCCACCTTTAGCCTTTTAAAACATTGCACATTATTGAGAACCTAGAACTAAGGAAGAGGACCTCTAGATAACGTTGATGTTGTTGACTTTTTCATGTGTGACTAGTCAGGAGAAATTTTAGAATTAGGGATTTTGACCTTCCAAAGCTTAGCAAAGAAAATGAGTTGTGAAATAAGAGAATGAAGCAAGCAAGGGAAAAGAAGATTAGAAAATAACAAACCTGAGGAATCAAGAGGACATATCCTGGCCTACCCTATCTGACAAAGCACTTCTCAGGTGGAAGTCAAATGAAAAGCAATCCCCTAAACACAGAAAGAAAATAGGCGATGAAACTATTTTATGCAAAGATAAAACATACAAATGAAGGAATAATAAATAAAGAGGACCATCCCCAGTCCAAAACTCTTCCCAAAAATAGACCTTAGAACCACCACTAAAAGAAAATTTAATGAAGTTCAGTAATTTGGGGAGACACTTTGAAATTGCCTTCCATGGATTCCTCAAAGTGCTCTGTCACCACCAAAATTTCCATCCATTAGCATGGTGCTTGTACTTATCAAAATCCTATTGCTATACCATCCTAGATTTTTAAGGAAGCCTCCTCAAACACTTAGTGAAAGGTGAAAAATTCTTGCACGATAAATTACCCAACCTGCCATTTTGCGACCTTCCCATCTACCCATTTGCTCAAAAAATTTCTCTCATAATTTAAAATTTTCTCCAACTTCTTTATCATGGTCAAAGACGTTTCTGTTCTAGGATTAAATCCTGGGTTTAATCATTTAACTTCTATAAATAGAATACAAGAAAAAAAGGACAGAATGCCAGTCGCCAGGCCACCCTCCAATGTTTTAACATTTTTTTTTCACCAAGGTCAAAAGACAAAGAAAAGAAGGGAGATGAAACTGTTCTCAAACTTAAAAGTAGGGCCCATTTTTAGTTATCTGTTTTAGTCATGATTTAGTGGTGATGTGAGGTCATCGTTTCCAGTCTAGATGCTCAAAAAGGCTTGTTGGCATCCAAGGATGTGTGATAATGTTCAAAGTTCCGTCTACCAAGTCGGTAATCCATATACCCTTAAGATGTTCATCAAGTGAACACCCATTTATTTCTGCAGTTCGTTCCAAGGTTTGCATGAGAATATAAGATTTGAGAACGAGATGCGTTGGATAAGATGCCTAGGAGCAAGATTAATTTGGTGCACTCTCTCTACCCACACCTTTCTCTCTCTCCATCCCATTAGGAAACAAGGATAGCTTTGGATTTGAGAGGATTTCGAAAACCCACGGGAGAGGGTTATAGGATAAACACGAGTTTTGCATCCTATTCTTAAATGAAACCAAACATGGGTATAGCTATAAGTTACTATTTCCCATGGTAGAAAACCTCTCAAAGAGCTTCTTAGAGAATTTATTAGCATGCCTCCTTTCTCAATTTAAATAAATGGGAAAATCTTATAATTTTAGGTTTCTTGTCTTTCATAGATTTTTGTTTCGGGGCGTGGTATATTTGCCTTTTTGTTTTCATCGAACTTGGCTATCTTTGTTGATTAAGAATTTGTGTACGGATTTCTTCTTGACAAATCCATATTTGTGCCCTTTTGATGGCTATCATGTCTTATGAAAATAAATTTCTTCTCATGACTGATGTAGGAAGAATCTGTCGTTGGTTTGCTTGGTAAGTTCTTTACCTCATTGTTTCAGGACTCAAAGACCTTGCTGATTTCCTACCTGCATCATTTGCTACTATTGTGAGCTACTTTTCAGCTGAAGTTACACGGGGTATATGGAAGCCAGCATTTATGAATGGAACTGATTGGCCTAGTCCTGCTGCAACCTTGTCCATCGTTGAGCAGCAGATAAAAAAAATTCTTGCTGCAACTGGTGTTGATGTCCCTAGTCTTGCTGTAGGTAAATTCTTGATGTGAATTAATGTTTGTTTTGTTTTGTTTTTTTTTTTTTGGTAGAATAATTCTTTCTGTTTGTGGGATAGTCGTATGGTAAGGTTATGACTTGTCTGGCAAATATTTTCCTACTTTTATTCCAATTGATTTGAATAAAAAAAAAGGAGGAATATGAAAAAAATATTTACAAACAAGAGATGCTTTTGAAGGGCGCTTTTATGACCTCCCTTTGTCAGTTAGGTGTATTTCTTATCTTCCACCCTATGAAACTTTTTGTTCCCAAAAATCCTTACAAACAAGAGATGCTTTTGAAGGCCGCTTTTATAATCTATCTACTGGGATAGGTAGGTGCATTTCTTATCTTTCACCTCATTTGTTTATGAAAAATTTTGTTTCGTCAGAAAATATAATAAAAATGTTCTTTATCATATAAACACCACCTAAAAGCTAAGAAAATACACTGTCCGAAATCTCCCTTCTATCCTTAGATTTCTCCATCAAGCTCTCCTATTTCTCTTTGTCTAAAAGGACAAACCCAAAAGCACAGCCTGCTGTCGGTCCACAAAATCTTCCTTTTACGCTTGAATAGTTGGCTGAACAAAAATTGGATAAGAAGGCCCCCCTTCCTGCCTCCTGGTGATTGCACTGAAAAGATATTAAGCGAAACAACTCCACCATCAACACTCTAGAAAATTCGAGTCTCGGACAAAGTAGTTGGACAAAGCGAAAAAAGTAGTTGCAAGTTCTGGAGTGTAGAATATAATGTCCATTTAGATATAGTAATCTAAATACCTATTGTGGAAGGTGATAGAAACTTTACAGTGTTTGAAGTGTGATTAAGCTGCTGAACATAAAAAAGTTTAATTGGTATTGCTATTGCTATTGCATTTCATTCGTTTTCTGTTCAATCTGAAATTGAGCTTGAACTGTATTTGCAGGTGGGAATTCTCCAGCTATGCTTCCTTTACCATTGGCTGCCCTAATAAGCCTCACAATAACTTATAAACTGGATAAAGCCTCTGAACGACTTCTTGCCCTTGTTGGCCCAGCGCTGAACACCCTTGCTGCTAGTTGTTCGTGGCCATGCACACCTATTATAGCCTCATTATGGGCTCAGAAGGTGAAGCGATGGAATGACTTCCTTGTTTTCTCTGCCTCTCGCACTGTTTTTCACCATAATAGTGATGCTGTTGTCCAGCTGCTTAAGAGTTGTTTCACTTCAACTCTCGGTTTAGGAAACTCCAATTTAAACAGTAATGGAGGTGTAGGCACGCTCCTTGGTCATGGTTTTGGCTCTCACGTCTTAGGAGGGATGTCTCCAGTTGCTCCTGGTATTCTCTATCTGCGAGTGCATCGATCGGTGAGAGATGCTTTGTTCATGGTGGAGGAGATCGTGTCTCTTCTAATGCTCTCTGTCAGAGATATTGCAGTTAGCGGGTTACCAAGGGAGAAAGCTGAAAAACTAAAGAAGACCAAACATGGAATGCGATATGAACAGGTTTCTTTTGCTTCAGCAATGTCACGTGTCAAGCTTGCAGCTTCCCTAGGAGCTTCATTAGTTTGGATATCCGGTGGATCAGGTTTAGTCCAATCTTTGTTTAAAGAAACCTTGCCGTCATGGTTTTTGTCGGTCCATTCACTGGAGCGTGAAGGTGTAGAATATGGAGGCATGGTTGCTGTGCTTGGGGGTTATGCACTTGCATTCTTTTCAGTTCTTTGTGGAACGTTTTCGTGGGGCATAGACTCGGTATCTTCAGCATCGAAGAGGCGGGCAAAGATTCTAGATTCCCACCTTGAGTTTCTTGCGAGTGCCCTAGATGGAAAATTTTCAATTGGGTGTGATTGGGCTACTTGGCGGGCTTATGTTTCAGGGTTTGTGAGCTTGATGGTGCGTTGTGCACCGAAGTGGGTGGTGGAGGTGGACGTGAACATCTTGAAGAGGTTGAGCAACGGATTAAGGCAGTTGAGCGAGGAAGAATTGGCTCTTGCCTTGCTGGAAAGTGGTGGGGTGACTGCAATGGGTGCAGCAGCTGAACTCATCATTGAAGGTGGCTTT

mRNA sequence

TTATGGGACAGTGTGTTGGAGCTTACGAAGTCGGCGCAGGACAAGAACTGCGATCCACTGCTCTGGGCGGTTCAGTTGAGCTCCAGCCTCAATTCTGCTGGCGTTTCCTTGCCGTCAATCGAGCTCGCCCAGCTCTTGGTCTCCCATATTTGTTGGGACAATCATGTGCCTATCATGTGGAAGTTCCTTGAGAAGGCAATGACTGCGAAAATCGTTCCTCCCCTGCTGGTTGTTGCTCTTCTTTCTACGAGGGCAATTCCGTATAGAAAGCTCCGACCTGCAGCATACAGACTTTACCTGGAACTTCTCAGCCGACATGTCTTTTCATCAACATCGCAAATCAACGGACCCAATTATCAAAGGATCATGCAAACCATCGATGATGTCCTTCATTTGTCCCAGATATTCAGTCTCCAAGCATGTGAACCTGGGCTACTTATGGTTGAATTATTCTTTTCAATTGTGTGGCAGTTACTTGATGCATCATTGGATGATGAAGGATTGCTGGTACTTCCTGCAGAAGAGAGATCAGCCTGGTTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCTTTCAGTGAGAAGAGAACTGAGAACAGTGAAAGTTTGCTTAAAGTAAACACGGCAAAGGCTATCGAGATAATTGGACAGTTTCTGCAAAATAAAAAAACTGCAAGGATTTTGTACTTGGCCCATCGAAATATGCCATTGCACTGGGCAGGTTTTGCTCAGCGGTTACAACTACTTGCAGCAAACTCAGCAGTTTTGAGGAACACAAAGCTAATAACTCCAGAGGTCCTTCTGCACTGGACATCTGATAAACATAGGCTTTTATCACGAGAAGGAAAAACATCTCAGCAGGAGTTTCGTAATGTAATGGCTTCTGGGTCACTATTTTCTTCCGCCGGTCAATCTCATGGTGTTAATTGGTCCACATTGTGGCTTCCCATTGATTTGTTCCTGGAAGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTTATTTGTTTGATTAAATCTTTGCAGGCAGTTAATGATACCTCCTGGCACAACACTTTTATGGGTTTGTGGATTGCAGCCTTGCGACTTATTCAAAGGGAAAGGGATCCTAGTGAGGGTCCTGTACCTCGTTTGGATACATGCTTGTGCATGTTGTTGTCTATTACAACCCTAGCAGTCACCATTATAATTGAAGAAGATGAAGGTGAACTGAAGGAGGAGGATGAATGCAGCCCAAGTAAAGGCAGAGATGAGAAGAAGTGTTCAGGAAAGTGCCGCAAAGGTTTGATTACGAGCCTGCAGATGTTGGGTGAATATGAGGGCTTGTTGACTCCTCCTCAATCCGTTACTGCAATAGCCAATCAAGCTGCTGCAAAAGCAGTAATGTTCATATCAGGGGTTGCAGTTGGCAACGAGTACTATGACTGTGTTAGTATGAATGACACGCCAGTTAATTGTTCTGGAAATATGCGTCATCTAATTGTTGAGGCTTGTATTTCTAGGAACCTTCTAGATACATCAGCATATTTTTGGCCAGGCTACGTGAATGCACGCAGCAGTCAAGTGCCTCGTAGTGCATCTGGTCAGGTTGTTGGTTGGTCATCATTCATGAAAGGATCCTCTCTAACTCTGTCAATGGTGGATGCTTTAGTGGCCACTCCAGCTTCTAGCTTAGCAGAGATTGAGAAGATCTATGAGATTGCAGTCAATGGTTCAGGTGACGAGAAGATCTCTGCAGCTTCCATTTTGTGTGGGGAATCACTTGTTCGTGGTTGGAATCTACAGGAACACACCGTTCTATTTATTGCCAGATTATTATCGCCCCCAATTCCTGCAGATTACTCTGGCAGTGATAGCTATTTGATCGACTACGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGTGTGCAGATTTTTTCCTTGCATGGCATGGTTCCTCTGCTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCAAGTCCGCCAAAGTCATGGGTCCTTACATCTGGGGAAGAGCTTACTTGTCATGCAGTATTCTCCTTGGCATTTACACTTCTGCTAAGGTTGTGGCGGTTTCATCACCCACCTGTTGAAAATGTGAAGGGAGATGCACGACCTGTGGGATCTCAACTAACTCCTGAATATCTGCTATTGGTTCGAAATTCTCAGTTGGCATCTTTTGGAAAGTCGCCCAAGGATAGATTTAAAGTTAGACGGCTGTCAAAACTTTTGAAATTTTCTTTAGAACCTATATTCATGGATTCATTTCCAAAATTGAAGGGCTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCTCTCTGGTCTTGTACCCGGGGCACCTGTTCATCAAATTGTTGATGCACTCTTGACTATGATGTTCAGGAAGATAAATCGTGGTGGACAGTCTTTGACTTCGACAACTTCAGGAAGCAGCAACTCGTCTGGATCTGCAAATGAAGAAGCCTCCATTAAGCTTAAAGTTCCTGCATGGGACATTCTCGAGGCAACTCCCTTCGTGCTGGATGCTGCTCTTACTGCTTGTGCTCATGGGCGATTGTCTCCTCGTGATTTGGCTACAGGACTCAAAGACCTTGCTGATTTCCTACCTGCATCATTTGCTACTATTGTGAGCTACTTTTCAGCTGAAGTTACACGGGGTATATGGAAGCCAGCATTTATGAATGGAACTGATTGGCCTAGTCCTGCTGCAACCTTGTCCATCGTTGAGCAGCAGATAAAAAAAATTCTTGCTGCAACTGGTGTTGATGTCCCTAGTCTTGCTGTAGGTGGGAATTCTCCAGCTATGCTTCCTTTACCATTGGCTGCCCTAATAAGCCTCACAATAACTTATAAACTGGATAAAGCCTCTGAACGACTTCTTGCCCTTGTTGGCCCAGCGCTGAACACCCTTGCTGCTAGTTGTTCGTGGCCATGCACACCTATTATAGCCTCATTATGGGCTCAGAAGGTGAAGCGATGGAATGACTTCCTTGTTTTCTCTGCCTCTCGCACTGTTTTTCACCATAATAGTGATGCTGTTGTCCAGCTGCTTAAGAGTTGTTTCACTTCAACTCTCGGTTTAGGAAACTCCAATTTAAACAGTAATGGAGGTGTAGGCACGCTCCTTGGTCATGGTTTTGGCTCTCACGTCTTAGGAGGGATGTCTCCAGTTGCTCCTGGTATTCTCTATCTGCGAGTGCATCGATCGGTGAGAGATGCTTTGTTCATGGTGGAGGAGATCGTGTCTCTTCTAATGCTCTCTGTCAGAGATATTGCAGTTAGCGGGTTACCAAGGGAGAAAGCTGAAAAACTAAAGAAGACCAAACATGGAATGCGATATGAACAGGTTTCTTTTGCTTCAGCAATGTCACGTGTCAAGCTTGCAGCTTCCCTAGGAGCTTCATTAGTTTGGATATCCGGTGGATCAGGTTTAGTCCAATCTTTGTTTAAAGAAACCTTGCCGTCATGGTTTTTGTCGGTCCATTCACTGGAGCGTGAAGGTGTAGAATATGGAGGCATGGTTGCTGTGCTTGGGGGTTATGCACTTGCATTCTTTTCAGTTCTTTGTGGAACGTTTTCGTGGGGCATAGACTCGGTATCTTCAGCATCGAAGAGGCGGGCAAAGATTCTAGATTCCCACCTTGAGTTTCTTGCGAGTGCCCTAGATGGAAAATTTTCAATTGGGTGTGATTGGGCTACTTGGCGGGCTTATGTTTCAGGGTTTGTGAGCTTGATGGTGCGTTGTGCACCGAAGTGGGTGGTGGAGGTGGACGTGAACATCTTGAAGAGGTTGAGCAACGGATTAAGGCAGTTGAGCGAGGAAGAATTGGCTCTTGCCTTGCTGGAAAGTGGTGGGGTGACTGCAATGGGTGCAGCAGCTGAACTCATCATTGAAGGTGGCTTT

Coding sequence (CDS)

TTATGGGACAGTGTGTTGGAGCTTACGAAGTCGGCGCAGGACAAGAACTGCGATCCACTGCTCTGGGCGGTTCAGTTGAGCTCCAGCCTCAATTCTGCTGGCGTTTCCTTGCCGTCAATCGAGCTCGCCCAGCTCTTGGTCTCCCATATTTGTTGGGACAATCATGTGCCTATCATGTGGAAGTTCCTTGAGAAGGCAATGACTGCGAAAATCGTTCCTCCCCTGCTGGTTGTTGCTCTTCTTTCTACGAGGGCAATTCCGTATAGAAAGCTCCGACCTGCAGCATACAGACTTTACCTGGAACTTCTCAGCCGACATGTCTTTTCATCAACATCGCAAATCAACGGACCCAATTATCAAAGGATCATGCAAACCATCGATGATGTCCTTCATTTGTCCCAGATATTCAGTCTCCAAGCATGTGAACCTGGGCTACTTATGGTTGAATTATTCTTTTCAATTGTGTGGCAGTTACTTGATGCATCATTGGATGATGAAGGATTGCTGGTACTTCCTGCAGAAGAGAGATCAGCCTGGTTAATCAGGCCACAACCACATGATATGGAACTAGATGTTCATGATTCTTTCAGTGAGAAGAGAACTGAGAACAGTGAAAGTTTGCTTAAAGTAAACACGGCAAAGGCTATCGAGATAATTGGACAGTTTCTGCAAAATAAAAAAACTGCAAGGATTTTGTACTTGGCCCATCGAAATATGCCATTGCACTGGGCAGGTTTTGCTCAGCGGTTACAACTACTTGCAGCAAACTCAGCAGTTTTGAGGAACACAAAGCTAATAACTCCAGAGGTCCTTCTGCACTGGACATCTGATAAACATAGGCTTTTATCACGAGAAGGAAAAACATCTCAGCAGGAGTTTCGTAATGTAATGGCTTCTGGGTCACTATTTTCTTCCGCCGGTCAATCTCATGGTGTTAATTGGTCCACATTGTGGCTTCCCATTGATTTGTTCCTGGAAGATGCCATGGATGGATCACAAGTTCTGGCAACTAGTGCTGTTGAGCGTCTTATTTGTTTGATTAAATCTTTGCAGGCAGTTAATGATACCTCCTGGCACAACACTTTTATGGGTTTGTGGATTGCAGCCTTGCGACTTATTCAAAGGGAAAGGGATCCTAGTGAGGGTCCTGTACCTCGTTTGGATACATGCTTGTGCATGTTGTTGTCTATTACAACCCTAGCAGTCACCATTATAATTGAAGAAGATGAAGGTGAACTGAAGGAGGAGGATGAATGCAGCCCAAGTAAAGGCAGAGATGAGAAGAAGTGTTCAGGAAAGTGCCGCAAAGGTTTGATTACGAGCCTGCAGATGTTGGGTGAATATGAGGGCTTGTTGACTCCTCCTCAATCCGTTACTGCAATAGCCAATCAAGCTGCTGCAAAAGCAGTAATGTTCATATCAGGGGTTGCAGTTGGCAACGAGTACTATGACTGTGTTAGTATGAATGACACGCCAGTTAATTGTTCTGGAAATATGCGTCATCTAATTGTTGAGGCTTGTATTTCTAGGAACCTTCTAGATACATCAGCATATTTTTGGCCAGGCTACGTGAATGCACGCAGCAGTCAAGTGCCTCGTAGTGCATCTGGTCAGGTTGTTGGTTGGTCATCATTCATGAAAGGATCCTCTCTAACTCTGTCAATGGTGGATGCTTTAGTGGCCACTCCAGCTTCTAGCTTAGCAGAGATTGAGAAGATCTATGAGATTGCAGTCAATGGTTCAGGTGACGAGAAGATCTCTGCAGCTTCCATTTTGTGTGGGGAATCACTTGTTCGTGGTTGGAATCTACAGGAACACACCGTTCTATTTATTGCCAGATTATTATCGCCCCCAATTCCTGCAGATTACTCTGGCAGTGATAGCTATTTGATCGACTACGCCCCATTTCTGAATGTTCTACTGGTTGGAATATCATCAGTTGATTGTGTGCAGATTTTTTCCTTGCATGGCATGGTTCCTCTGCTTGCAGGTCAATTAATGCCAATCTGCGAAGCTTTTGGATCAAGTCCGCCAAAGTCATGGGTCCTTACATCTGGGGAAGAGCTTACTTGTCATGCAGTATTCTCCTTGGCATTTACACTTCTGCTAAGGTTGTGGCGGTTTCATCACCCACCTGTTGAAAATGTGAAGGGAGATGCACGACCTGTGGGATCTCAACTAACTCCTGAATATCTGCTATTGGTTCGAAATTCTCAGTTGGCATCTTTTGGAAAGTCGCCCAAGGATAGATTTAAAGTTAGACGGCTGTCAAAACTTTTGAAATTTTCTTTAGAACCTATATTCATGGATTCATTTCCAAAATTGAAGGGCTGGTACCGGCAACATCAAGAATGCATTGCTTCCATTCTCTCTGGTCTTGTACCCGGGGCACCTGTTCATCAAATTGTTGATGCACTCTTGACTATGATGTTCAGGAAGATAAATCGTGGTGGACAGTCTTTGACTTCGACAACTTCAGGAAGCAGCAACTCGTCTGGATCTGCAAATGAAGAAGCCTCCATTAAGCTTAAAGTTCCTGCATGGGACATTCTCGAGGCAACTCCCTTCGTGCTGGATGCTGCTCTTACTGCTTGTGCTCATGGGCGATTGTCTCCTCGTGATTTGGCTACAGGACTCAAAGACCTTGCTGATTTCCTACCTGCATCATTTGCTACTATTGTGAGCTACTTTTCAGCTGAAGTTACACGGGGTATATGGAAGCCAGCATTTATGAATGGAACTGATTGGCCTAGTCCTGCTGCAACCTTGTCCATCGTTGAGCAGCAGATAAAAAAAATTCTTGCTGCAACTGGTGTTGATGTCCCTAGTCTTGCTGTAGGTGGGAATTCTCCAGCTATGCTTCCTTTACCATTGGCTGCCCTAATAAGCCTCACAATAACTTATAAACTGGATAAAGCCTCTGAACGACTTCTTGCCCTTGTTGGCCCAGCGCTGAACACCCTTGCTGCTAGTTGTTCGTGGCCATGCACACCTATTATAGCCTCATTATGGGCTCAGAAGGTGAAGCGATGGAATGACTTCCTTGTTTTCTCTGCCTCTCGCACTGTTTTTCACCATAATAGTGATGCTGTTGTCCAGCTGCTTAAGAGTTGTTTCACTTCAACTCTCGGTTTAGGAAACTCCAATTTAAACAGTAATGGAGGTGTAGGCACGCTCCTTGGTCATGGTTTTGGCTCTCACGTCTTAGGAGGGATGTCTCCAGTTGCTCCTGGTATTCTCTATCTGCGAGTGCATCGATCGGTGAGAGATGCTTTGTTCATGGTGGAGGAGATCGTGTCTCTTCTAATGCTCTCTGTCAGAGATATTGCAGTTAGCGGGTTACCAAGGGAGAAAGCTGAAAAACTAAAGAAGACCAAACATGGAATGCGATATGAACAGGTTTCTTTTGCTTCAGCAATGTCACGTGTCAAGCTTGCAGCTTCCCTAGGAGCTTCATTAGTTTGGATATCCGGTGGATCAGGTTTAGTCCAATCTTTGTTTAAAGAAACCTTGCCGTCATGGTTTTTGTCGGTCCATTCACTGGAGCGTGAAGGTGTAGAATATGGAGGCATGGTTGCTGTGCTTGGGGGTTATGCACTTGCATTCTTTTCAGTTCTTTGTGGAACGTTTTCGTGGGGCATAGACTCGGTATCTTCAGCATCGAAGAGGCGGGCAAAGATTCTAGATTCCCACCTTGAGTTTCTTGCGAGTGCCCTAGATGGAAAATTTTCAATTGGGTGTGATTGGGCTACTTGGCGGGCTTATGTTTCAGGGTTTGTGAGCTTGATGGTGCGTTGTGCACCGAAGTGGGTGGTGGAGGTGGACGTGAACATCTTGAAGAGGTTGAGCAACGGATTAAGGCAGTTGAGCGAGGAAGAATTGGCTCTTGCCTTGCTGGAAAGTGGTGGGGTGACTGCAATGGGTGCAGCAGCTGAACTCATCATTGAAGGTGGCTTT

Protein sequence

LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMWKFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQRIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMPLHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKTSQQEFRNVMASGSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWHNTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDECSPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVGNEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQVVGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVRGWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGILYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASAMSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYALAFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF

Homology

[Close]

BLAST of MS011876 vs. NCBI nr
Match: XP_022155567.1 (mediator of RNA polymerase II transcription subunit 33B-like [Momordica charantia])

HSP 1 Score: 2575.0 bits (6673), Expect = 0.0e+00
Identity = 1315/1319 (99.70%), Postives = 1315/1319 (99.70%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW
Sbjct: 17   LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 76

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ
Sbjct: 77   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 136

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL
Sbjct: 137  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 196

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
            IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP
Sbjct: 197  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 256

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKTSQQEFRNVMASG 300
            LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKTSQQEFRNVMASG
Sbjct: 257  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKTSQQEFRNVMASG 316

Query: 301  SLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWHN 360
            SLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWHN
Sbjct: 317  SLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWHN 376

Query: 361  TFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDECS 420
            TFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDECS
Sbjct: 377  TFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDECS 436

Query: 421  PSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVGN 480
            PSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVGN
Sbjct: 437  PSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVGN 496

Query: 481  EYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQVV 540
            EYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTS YFWPGYVNARSSQVPRSASGQVV
Sbjct: 497  EYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSVYFWPGYVNARSSQVPRSASGQVV 556

Query: 541  GWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVRG 600
            GWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVRG
Sbjct: 557  GWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVRG 616

Query: 601  WNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP 660
            WNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP
Sbjct: 617  WNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP 676

Query: 661  LLAGQLMPICEAFGSSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDA 720
            LLAGQLMPICEAFG SPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVK DA
Sbjct: 677  LLAGQLMPICEAFGLSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKRDA 736

Query: 721  RPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYR 780
            RPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYR
Sbjct: 737  RPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYR 796

Query: 781  QHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEAS 840
            QHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGG SLTSTTSGSSNSSGSANEEAS
Sbjct: 797  QHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGHSLTSTTSGSSNSSGSANEEAS 856

Query: 841  IKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAE 900
            IKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAE
Sbjct: 857  IKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAE 916

Query: 901  VTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLAA 960
            VTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLAA
Sbjct: 917  VTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLAA 976

Query: 961  LISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSAS 1020
            LISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSAS
Sbjct: 977  LISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSAS 1036

Query: 1021 RTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGIL 1080
            RTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGIL
Sbjct: 1037 RTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGIL 1096

Query: 1081 YLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASAM 1140
            YLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASAM
Sbjct: 1097 YLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASAM 1156

Query: 1141 SRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYAL 1200
            SRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYAL
Sbjct: 1157 SRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYAL 1216

Query: 1201 AFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFV 1260
            AFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFV
Sbjct: 1217 AFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFV 1276

Query: 1261 SLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF 1320
            SLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF
Sbjct: 1277 SLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF 1335

[Close]

BLAST of MS011876 vs. NCBI nr
Match: XP_038887593.1 (mediator of RNA polymerase II transcription subunit 33B isoform X1 [Benincasa hispida])

HSP 1 Score: 2426.0 bits (6286), Expect = 0.0e+00
Identity = 1231/1319 (93.33%), Postives = 1278/1319 (96.89%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            LWDSVLELTKSAQDKNCDPLLWAVQLSS+LNSAGVSLPS+ELAQLLVSHICWDNHVPIMW
Sbjct: 17   LWDSVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPIMW 76

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            KFLEKAMTA+IVPPLLV+ALLSTRAIPYRKLRPAAYRLYLE+LSRH+FS TSQINGPNYQ
Sbjct: 77   KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLEVLSRHIFSLTSQINGPNYQ 136

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            RIMQTIDDVLHL+QIF +Q CEPG+LMVELFFSIVWQLLDASLDDEGLL LP EE+S WL
Sbjct: 137  RIMQTIDDVLHLTQIFGVQTCEPGVLMVELFFSIVWQLLDASLDDEGLLALPGEEKSVWL 196

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
            IRPQ HDMELDVHDSF EKRTENSESLLKVNTAKAIEIIGQFLQNKKTARIL LA RNMP
Sbjct: 197  IRPQLHDMELDVHDSFGEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILCLALRNMP 256

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKTSQQEFRNVMASG 300
            LHWAGFAQRL+LLAANS VLRNTKLITPEVLLHWTSDK +LLS+EGKT Q EFR+VMASG
Sbjct: 257  LHWAGFAQRLKLLAANSVVLRNTKLITPEVLLHWTSDKSKLLSQEGKTCQLEFRDVMASG 316

Query: 301  SLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWHN 360
            SLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLICLIKSL+AVND+SWHN
Sbjct: 317  SLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDSSWHN 376

Query: 361  TFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDECS 420
            TF+GLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEE+EGE+K EDECS
Sbjct: 377  TFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTIIIEEEEGEVK-EDECS 436

Query: 421  PSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVGN 480
             SK RDEK+ SG CRKGLITSLQMLGEYE LL PPQSV A+ANQAAAKAVMFISGVAVGN
Sbjct: 437  ASKSRDEKQSSGMCRKGLITSLQMLGEYESLLIPPQSVIAVANQAAAKAVMFISGVAVGN 496

Query: 481  EYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQVV 540
            EY+DCVSM+DTP+NCSGNMRHLIVEACISRNLLDTSAYFWPGY NARSSQVPRSAS QVV
Sbjct: 497  EYHDCVSMSDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYANARSSQVPRSASSQVV 556

Query: 541  GWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVRG 600
            GWSSFMKGSSLT SMV+ALVATPASSLAEIEKIYEIA+NGSGDEKISAASILCG SLVRG
Sbjct: 557  GWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRG 616

Query: 601  WNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP 660
            WNLQEHT LFI+RLLSPPIP DYSGS+SYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP
Sbjct: 617  WNLQEHTALFISRLLSPPIPTDYSGSESYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP 676

Query: 661  LLAGQLMPICEAFGSSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDA 720
            LLAGQLMPICEAFGS  PKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDA
Sbjct: 677  LLAGQLMPICEAFGSCSPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDA 736

Query: 721  RPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYR 780
            RPVGSQLTPEYLLLVRNSQLASFGKSPKDR K RRLSKLLKFSLEPIFMDSFPKLKGWYR
Sbjct: 737  RPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKARRLSKLLKFSLEPIFMDSFPKLKGWYR 796

Query: 781  QHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEAS 840
            QHQECIASILSGL+PGAPVHQIVDALLTMMFRKINR GQSLTSTTSGSSNSSGSANEEAS
Sbjct: 797  QHQECIASILSGLIPGAPVHQIVDALLTMMFRKINRAGQSLTSTTSGSSNSSGSANEEAS 856

Query: 841  IKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAE 900
            IKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAE
Sbjct: 857  IKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAE 916

Query: 901  VTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLAA 960
            VTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGG+SPAMLPLPLAA
Sbjct: 917  VTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGSSPAMLPLPLAA 976

Query: 961  LISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSAS 1020
            LISLTITYKLDKASERLLALVGPALN+LAASCSWPCTPIIASLWAQKVKRWNDFLVFSAS
Sbjct: 977  LISLTITYKLDKASERLLALVGPALNSLAASCSWPCTPIIASLWAQKVKRWNDFLVFSAS 1036

Query: 1021 RTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGIL 1080
            RTVFHH SDAVVQLLKSCFTSTLGLGNSN+NS+GGVGTLLGHGFGSHVLGGMSPVAPGIL
Sbjct: 1037 RTVFHHTSDAVVQLLKSCFTSTLGLGNSNVNSSGGVGTLLGHGFGSHVLGGMSPVAPGIL 1096

Query: 1081 YLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASAM 1140
            YLRVHRSVRD LF+VEEIVSLLMLSVRDIAVSGLP+EKAEKLKKTK+GMRYEQVSFASAM
Sbjct: 1097 YLRVHRSVRDVLFLVEEIVSLLMLSVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAM 1156

Query: 1141 SRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYAL 1200
            +RVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSV S+EREGVEYGGMVAVL GYAL
Sbjct: 1157 ARVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVQSVEREGVEYGGMVAVLRGYAL 1216

Query: 1201 AFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFV 1260
            AFFSVLCGTFSWGIDS SSASKRRAKILDS LEFLASALDGKFSIGCDWATWRAYVSGFV
Sbjct: 1217 AFFSVLCGTFSWGIDSSSSASKRRAKILDSFLEFLASALDGKFSIGCDWATWRAYVSGFV 1276

Query: 1261 SLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF 1320
            SLMVRCAP+W++EVD+N+LKRLSNGLRQL+EE+LALALL SGGVTAMGAAAELIIEGGF
Sbjct: 1277 SLMVRCAPRWLLEVDLNLLKRLSNGLRQLNEEQLALALLGSGGVTAMGAAAELIIEGGF 1334

[Close]

BLAST of MS011876 vs. NCBI nr
Match: KAG6571443.1 (Mediator of RNA polymerase II transcription subunit 33A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011209.1 Mediator of RNA polymerase II transcription subunit 33A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2410.6 bits (6246), Expect = 0.0e+00
Identity = 1219/1320 (92.35%), Postives = 1268/1320 (96.06%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            +WD+VLELTKSAQ+KN DPLLWAVQLSSSLNSA VSLPS+ELA LLVSHICWDNHVPIMW
Sbjct: 17   VWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSLELAHLLVSHICWDNHVPIMW 76

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            KFLEKAMTA+IVPPLLV+ALLSTRAIPYRKLRPAAYRLYLELLSRHVFSST ++NGPNY 
Sbjct: 77   KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            RIMQTIDDVLHLSQIF LQ CEPGLLMVELFFSIVW LLDASLDDEGLL LPAEERS WL
Sbjct: 137  RIMQTIDDVLHLSQIFDLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
            IRPQPHDMELDVHDSF EK+TENSE+LLKVNTAKAIEIIGQFLQNKKTARIL LAH+NMP
Sbjct: 197  IRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKT-SQQEFRNVMAS 300
            LHWAGFAQRLQLLAANS VLRNTKLITPEVLL WTSDKHR LS+EGKT SQ EF +VMAS
Sbjct: 257  LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQEGKTKSQLEFHDVMAS 316

Query: 301  GSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWH 360
            GSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLICLIKSL+AVND SWH
Sbjct: 317  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376

Query: 361  NTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDEC 420
            NTF+GLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEE+EGELKEEDEC
Sbjct: 377  NTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDEC 436

Query: 421  SPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVG 480
            SPSK RDEK+ SGK R+GLITSLQMLGEYE LLTPPQSV  +ANQAAAKAVMFISGVAVG
Sbjct: 437  SPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVG 496

Query: 481  NEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQV 540
            NEYYDCVSMNDTP+NCSGNMRHLIVEACISRNLLDTSAYFWPGYVN RSSQVPRSAS QV
Sbjct: 497  NEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNTRSSQVPRSASSQV 556

Query: 541  VGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVR 600
            VGWSSFMKGSSLT SMV+ALVATPASSLAEIEKIYEIA+NGSGDEKISAASILCG SLVR
Sbjct: 557  VGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVR 616

Query: 601  GWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 660
            GWNLQEHTVLFI+RLLSPPIPADY GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV
Sbjct: 617  GWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 676

Query: 661  PLLAGQLMPICEAFGSSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGD 720
            PLLAGQLMPICEAFGSS PKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGD
Sbjct: 677  PLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGD 736

Query: 721  ARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWY 780
            ARPVGSQLTPEYLLLVRNSQLASFGKSPKDR KVRRLSKLLKFSLEP FMDSFPKLKGWY
Sbjct: 737  ARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWY 796

Query: 781  RQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEA 840
            RQHQECIASI  GLVPGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEA
Sbjct: 797  RQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEA 856

Query: 841  SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSA 900
            SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIV YFSA
Sbjct: 857  SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVCYFSA 916

Query: 901  EVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLA 960
            EVTRGIWKPAFMNGTDWPSPAATLS+VEQQIKKILAATGVDVPSLA+GG+ PAMLPLPLA
Sbjct: 917  EVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLPLA 976

Query: 961  ALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSA 1020
            ALISLTITYKLDKASERLLALVGPALN+L A CSWPCTPIIASLWAQKVKRWNDFLVFSA
Sbjct: 977  ALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVFSA 1036

Query: 1021 SRTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGI 1080
            SRTVFHHNSDAVVQLLKSCFTSTLGLGNSN+NS GGVG LLGHGFGSHVLGGMSP APGI
Sbjct: 1037 SRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPAAPGI 1096

Query: 1081 LYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASA 1140
            LYLRVHR VRDALF+VEEIVSLLMLSV+DIAV+GLP+EKAEKLKK+KHGMR EQVSFASA
Sbjct: 1097 LYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFASA 1156

Query: 1141 MSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYA 1200
            M+RVKLAASLGASLVWISGGSGLVQSL+KETLPSWFLSVHS++REGVEYGGMV VL GYA
Sbjct: 1157 MARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRGYA 1216

Query: 1201 LAFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGF 1260
            LAFFSVLCGTFSWGIDS+SSASKRRAK+LDSHLEFLASALDGKFSIGCDWATWRAYVSGF
Sbjct: 1217 LAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGKFSIGCDWATWRAYVSGF 1276

Query: 1261 VSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF 1320
            VSL+VRCAPKW++EVD+ +LKRL  GLRQL+EEELALALLESGG+TAMGAAAELIIEGGF
Sbjct: 1277 VSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGGLTAMGAAAELIIEGGF 1336

[Close]

BLAST of MS011876 vs. NCBI nr
Match: XP_023554812.1 (mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2410.6 bits (6246), Expect = 0.0e+00
Identity = 1218/1320 (92.27%), Postives = 1269/1320 (96.14%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            +WD+VLELTKSAQ+KN DPLLWAVQLSSSLNSA VSLPS+ELA LLVSHICWDNHVPIMW
Sbjct: 17   VWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMW 76

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            KFLEKAMTA+IVPPLLV+ALLSTRAIPYRKLRPAAYRLYLELLSRHVFSST ++NGPNY 
Sbjct: 77   KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            RIMQTIDDVLHLSQIF LQ CEPGLLMVELFFSIVW LLDASLDDEGLL LPAEERS WL
Sbjct: 137  RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
            IRPQPHDMELDVHDSF EK+TENSE+LLKVNTAKAIEIIGQFLQNKKTARIL LAH+NMP
Sbjct: 197  IRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGK-TSQQEFRNVMAS 300
            LHWAGFAQRLQLLAANS VLRNTKLITPEVLLHWTSDKHR LS+EGK TSQ EF +VMAS
Sbjct: 257  LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTTSQLEFHDVMAS 316

Query: 301  GSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWH 360
            GSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLICLIKSL+AVND SWH
Sbjct: 317  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376

Query: 361  NTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDEC 420
            NTF+GLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEE+EGELKEEDEC
Sbjct: 377  NTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDEC 436

Query: 421  SPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVG 480
            SPSK RDEK+ SGK R+GLITSLQMLGEYE LLTPPQSV  +ANQAAAKAVMFISGVAVG
Sbjct: 437  SPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVG 496

Query: 481  NEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQV 540
            NEYYDCVSMNDTP+NCSGNMRHLIVEACISRNLLDTSAYFWPGYVN RSSQVPRSAS QV
Sbjct: 497  NEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNTRSSQVPRSASSQV 556

Query: 541  VGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVR 600
            VGWSSFMKGSSLT SMV+AL ATPASSLAEIEKIYEIA+NGSGDEKISAASILCG SLVR
Sbjct: 557  VGWSSFMKGSSLTPSMVNALEATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVR 616

Query: 601  GWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 660
            GWNLQEHTVLFI+RLLSPPIPADY GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV
Sbjct: 617  GWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 676

Query: 661  PLLAGQLMPICEAFGSSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGD 720
            PLLAGQLMPICEAFGSS PKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGD
Sbjct: 677  PLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGD 736

Query: 721  ARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWY 780
            ARPVGSQLTPEYLLLVRNSQLASFGKSPKDR KVRRLSKLLKFSLEP FMDSFPKLKGWY
Sbjct: 737  ARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWY 796

Query: 781  RQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEA 840
            RQHQECIASI  GLVPGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEA
Sbjct: 797  RQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEA 856

Query: 841  SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSA 900
            SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIV YFSA
Sbjct: 857  SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVCYFSA 916

Query: 901  EVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLA 960
            EVTRGIWKPAFMNGTDWPSPAATLS+VEQQIKKILAATGVDVPSLA+GG+ PAMLPLPLA
Sbjct: 917  EVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLPLA 976

Query: 961  ALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSA 1020
            ALISLTITYKLDKASERLLALVGPALN+L A CSWPCTPIIASLWAQKVKRWNDFLVFSA
Sbjct: 977  ALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVFSA 1036

Query: 1021 SRTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGI 1080
            SRTVFHHNSDAVVQLLKSCFTSTLGLGNSN+NS GGVG LLGHGFGSHVLGGMSPVAPGI
Sbjct: 1037 SRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPVAPGI 1096

Query: 1081 LYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASA 1140
            LYLRVHR VRDALF+VEEIVSLLMLSV+DIAV+GLP+EKAEKLKK+KHGMR EQVSFASA
Sbjct: 1097 LYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFASA 1156

Query: 1141 MSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYA 1200
            M+RVKLAASLGASLVWISGGSGLVQSL+KETLPSWFLSVHS++REGVEYGGMV VL GYA
Sbjct: 1157 MARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRGYA 1216

Query: 1201 LAFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGF 1260
            LAFFSVLCGTFSWGIDS+SSASKRRAK+LD+HLEFLASALDGKFSIGCDWATWRAYVSGF
Sbjct: 1217 LAFFSVLCGTFSWGIDSISSASKRRAKLLDAHLEFLASALDGKFSIGCDWATWRAYVSGF 1276

Query: 1261 VSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF 1320
            VSL+VRCAPKW++EVD+ +L+RL  GLRQL+EEELALALLESGG+TAMGAAAELIIEGGF
Sbjct: 1277 VSLLVRCAPKWLLEVDLKVLERLGKGLRQLNEEELALALLESGGLTAMGAAAELIIEGGF 1336

[Close]

BLAST of MS011876 vs. NCBI nr
Match: XP_022963527.1 (mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita moschata])

HSP 1 Score: 2408.3 bits (6240), Expect = 0.0e+00
Identity = 1218/1320 (92.27%), Postives = 1267/1320 (95.98%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            +WD+VLELTKSAQ+KN DPLLWAVQLSSSLNSA VSLPS+ELA LLVSHICWDNHVPIMW
Sbjct: 17   VWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMW 76

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            KFLEKAMTA+IVPPLLV+ALLSTRAIPYRKLRPAAYRLYLELLSRHVFSST ++NGPNY 
Sbjct: 77   KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            RIMQTIDDVLHLSQIF LQ CEPGLLMVELFFSIVW LLDASLDDEGLL LPAEERS WL
Sbjct: 137  RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
            IRPQPHDMELDVHDSF EK+TENSE+LLKVNTAKAIEIIGQFLQNKKTARIL LAH+NMP
Sbjct: 197  IRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKT-SQQEFRNVMAS 300
            LHWAGFAQRLQLLAANS VLRNTKLITPEVLL WTSDKHR LS+EGKT SQ EF +VMAS
Sbjct: 257  LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQEGKTKSQLEFHDVMAS 316

Query: 301  GSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWH 360
            GSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLICLIKSL+AVND SWH
Sbjct: 317  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376

Query: 361  NTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDEC 420
            NTF+GLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEE+EGELKEEDEC
Sbjct: 377  NTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDEC 436

Query: 421  SPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVG 480
            SPSK RDEK+ SGK R+GLITSLQMLGEYE LLTPPQSV  +ANQAAAKAVMFISGVAVG
Sbjct: 437  SPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVG 496

Query: 481  NEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQV 540
            NEYYDCVSMNDTP+NCSGNMRHLIVEACISRNLLDTSAYFWPGYVN RSSQVPRSAS QV
Sbjct: 497  NEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNTRSSQVPRSASSQV 556

Query: 541  VGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVR 600
            VGWSSFMKGSSLT SMV+ALVATPASSLAEIEKIYEIA+NGSGDEKISAASILCG SLVR
Sbjct: 557  VGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVR 616

Query: 601  GWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 660
            GWNLQEHTVLFI+RLLSPPIPADY GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV
Sbjct: 617  GWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 676

Query: 661  PLLAGQLMPICEAFGSSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGD 720
            PLLAGQLMPICEAFGSS PKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGD
Sbjct: 677  PLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGD 736

Query: 721  ARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWY 780
            ARPVGSQLTPEYLLLVRNSQLASFGKSPKDR KVRRLSKLLKFSLEP FMDSFPKLKGWY
Sbjct: 737  ARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWY 796

Query: 781  RQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEA 840
            RQHQECIASI  GLVPGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEA
Sbjct: 797  RQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEA 856

Query: 841  SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSA 900
            SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIV YFSA
Sbjct: 857  SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVCYFSA 916

Query: 901  EVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLA 960
            EVTRGIWKPAFMNGTDWPSPAATLS+VEQQIKKILAATGVDVPSLA+GG+ PAMLPLPLA
Sbjct: 917  EVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLPLA 976

Query: 961  ALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSA 1020
            ALISLTITYKLDKASERLLALVGPALN+L A CSWPCTPIIASLWAQKVKRWNDFLVFSA
Sbjct: 977  ALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVFSA 1036

Query: 1021 SRTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGI 1080
            SRTVFHHNSDAVVQLLKSCFTSTLGLGNSN+NS GGVG LLGHGFGSHVLGGMSP APGI
Sbjct: 1037 SRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPAAPGI 1096

Query: 1081 LYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASA 1140
            LYLRVHR VRDALF+VEEIVSLLMLSV+DIAV+GLP+EKAEKLKK+KHGMR EQVSFASA
Sbjct: 1097 LYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFASA 1156

Query: 1141 MSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYA 1200
            M+RVKLAASLGASLVWISGGSGLVQSL+KETLPSWFLSVHS++REGVEYGGMV VL GYA
Sbjct: 1157 MARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRGYA 1216

Query: 1201 LAFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGF 1260
            LAFFSVLCGTFSWGIDS+SSASKRRAK+LDSHLEFLASALDGKFSIGCDWATWRAYVSGF
Sbjct: 1217 LAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGKFSIGCDWATWRAYVSGF 1276

Query: 1261 VSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF 1320
            VSL+VRCAPKW++EVD+ +LKRL  GLRQL+EEELALALLESGG+TAMGAAAELII GGF
Sbjct: 1277 VSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGGLTAMGAAAELIIGGGF 1336

[Close]

BLAST of MS011876 vs. ExPASy Swiss-Prot
Match: Q9LUG9 (Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana OX=3702 GN=MED33A PE=1 SV=1)

HSP 1 Score: 1506.5 bits (3899), Expect = 0.0e+00
Identity = 778/1319 (58.98%), Postives = 991/1319 (75.13%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            +WD V+ELTK AQ+   DP LWA QLSS+L    V LPS ELA+++VS+ICWDN+VPI+W
Sbjct: 9    VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            KFLE+AM  K+V PL+V+ALL+ R +P R  + AAYR+YLELL R++F+    I+GP+YQ
Sbjct: 69   KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            ++M ++ ++L LS++F L   +PG+L+VE  F +V QLLDA+L DEGLL L  +  S WL
Sbjct: 129  KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
            ++ Q  DME+D  + ++EK T + E L  +NT  AIE+I +FL+N   AR+LYL   N  
Sbjct: 189  VKSQ--DMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGK-TSQQEFRNVMAS 300
              W  F Q++QLL  NS+ L+++K++    LL   S++    S + K TS ++   ++  
Sbjct: 249  SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDF 308

Query: 301  GSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWH 360
            GSL S AG  HG + S+LWLP+DL  EDAMDG QV  TSA+E +  L K+L+ +N ++WH
Sbjct: 309  GSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTWH 368

Query: 361  NTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDEC 420
            +TF+GLWIAALRL+QRERDP EGP+PRLDT LCM L I  L V  +IEE + E   E   
Sbjct: 369  DTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVME--- 428

Query: 421  SPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVG 480
                         K R  L+TSLQ+LG++ GLL PP+ V + AN+AA KA++F+SG  VG
Sbjct: 429  -------------KLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVG 488

Query: 481  NEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQV 540
               +D ++M D PVNCSGNMRHLIVEACI+RN+LD SAY WPGYVN R +Q+P+S   +V
Sbjct: 489  KSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEV 548

Query: 541  VGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVR 600
              WSSF+KG+ L  +MV+ LV+ PASSLAE+EK++E+AV GS DEKISAA++LCG SL R
Sbjct: 549  PCWSSFVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVLCGASLTR 608

Query: 601  GWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 660
            GWN+QEHTV ++ RLLSPP+PADYS ++++LI YA  LNV++VGI SVD +QIFSLHGMV
Sbjct: 609  GWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQIFSLHGMV 668

Query: 661  PLLAGQLMPICEAFGS-SPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKG 720
            P LA  LMPICE FGS +P  SW L SGE ++ ++VFS AFTLLL+LWRF+HPP+E+  G
Sbjct: 669  PQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHPPIEHGVG 728

Query: 721  DARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLK-FSLEPIFMDSFPKLKG 780
            D   VGSQLTPE+LL VRNS L S     +DR + +RLS++ +  S +P+F+DSFPKLK 
Sbjct: 729  DVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNR-KRLSEVARAASCQPVFVDSFPKLKV 788

Query: 781  WYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANE 840
            WYRQHQ CIA+ LSGL  G+PVHQ V+ALL M F K+ RG Q+L    SG+S+SSG+A+E
Sbjct: 789  WYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVNSGTSSSSGAASE 848

Query: 841  EASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYF 900
            +++I+ + PAWDIL+A P+V+DAALTAC HGRLSPR LATGLKDLADFLPAS ATIVSYF
Sbjct: 849  DSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPASLATIVSYF 908

Query: 901  SAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLP 960
            SAEV+RG+WKP FMNG DWPSPA  LS VE+ I KILA TGVD+PSLA GG+SPA LPLP
Sbjct: 909  SAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGGSSPATLPLP 968

Query: 961  LAALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVF 1020
            LAA +SLTITYK+DKASER L L GPAL  LAA C WPC PI+ASLW QK KRW DFLVF
Sbjct: 969  LAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKAKRWFDFLVF 1028

Query: 1021 SASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAP 1080
            SASRTVF HN DAV+QLL++CF++TLGL  + ++++GGVG LLGHGFGSH  GG+SPVAP
Sbjct: 1029 SASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHFYGGISPVAP 1088

Query: 1081 GILYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFA 1140
            GILYLR++R++RD + + EEI+SLL+ SV DIA + L +EK EKLK  K+G RY Q S A
Sbjct: 1089 GILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNGSRYGQSSLA 1148

Query: 1141 SAMSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGG 1200
            +AM++VKLAASL ASLVW++GG G+V  L KET+PSWFLS    +RE      +VA L G
Sbjct: 1149 TAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGP-SDLVAELRG 1208

Query: 1201 YALAFFSVLCGTFSWGIDSVSSASKRRAK-ILDSHLEFLASALDGKFSIGCDWATWRAYV 1260
            +ALA+F VLCG  +WG+DS SSASKRR + IL SHLEF+ASALDGK S+GC+ ATWR Y+
Sbjct: 1209 HALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCETATWRTYI 1268

Query: 1261 SGFVSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELII 1316
            SG VSLMV C P WV E+D  +LK LSNGLR+  ++ELA+ LL  GG+  M  AA+ II
Sbjct: 1269 SGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTMDYAADFII 1305

[Close]

BLAST of MS011876 vs. ExPASy Swiss-Prot
Match: F4IN69 (Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana OX=3702 GN=MED33B PE=1 SV=1)

HSP 1 Score: 1489.2 bits (3854), Expect = 0.0e+00
Identity = 803/1340 (59.93%), Postives = 964/1340 (71.94%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            LW+SV  L +SAQ+KN DPL WA+QL  +L SAG+SLPS +LAQ LV+HI W+NH P+ W
Sbjct: 10   LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            K LEKA++  IVPPLLV+ALLS R IP RKL PAAYRLY+ELL RH FS    I  P Y 
Sbjct: 70   KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            + M +IDD+LHLS+ F +Q  EPG +++   FSIVW+LLDASLD+EGLL L + +RS W 
Sbjct: 130  KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
                PHDM+LD  ++ S KR EN ++L K NT  AIE+I +FLQNK T+RIL+LA +NM 
Sbjct: 190  -PSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM- 249

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKT-SQQEFRNVMAS 300
                                                        E KT  + EF  +++S
Sbjct: 250  --------------------------------------------ESKTIPRGEFHAIVSS 309

Query: 301  GSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWH 360
            GS  +          S LWLPIDLF ED MDG+Q  A SAVE L  L+K+LQA N TSWH
Sbjct: 310  GSKLALTSD------SALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWH 369

Query: 361  NTFMGLWIAALRLIQR-------------------ERDPSEGPVPRLDTCLCMLLSITTL 420
            + F+ LW+AALRL+QR                   ERDP EGPVPR DT LC+LLS+T L
Sbjct: 370  DAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTPL 429

Query: 421  AVTIIIEEDEGELKEEDECSPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTA 480
            AV  IIEE+E +  ++   SPS    EKK  GKCR+GLI SLQ LG+YE LLTPP+SV +
Sbjct: 430  AVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQS 489

Query: 481  IANQAAAKAVMFISGVAVGNEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFW 540
            +ANQAAAKA+MFISG+   N  Y+  SM+++   C           C  R  L T   F 
Sbjct: 490  VANQAAAKAIMFISGITNSNGSYENTSMSESASGC-----------CKVRFSLFTLKMFV 549

Query: 541  PGYVNARSSQVPRSASGQVVGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNG 600
               V    +         +  WS  MKGS LT S+ ++L+ TPASSLAEIEK+YE+A  G
Sbjct: 550  VMGVYLLCN---------ISCWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTG 609

Query: 601  SGDEKISAASILCGESLVRGWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVL 660
            S DEKI+ ASILCG SL RGW++QEH ++FI  LLSPP PAD SGS S+LI+ APFLNVL
Sbjct: 610  SEDEKIAVASILCGASLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVL 669

Query: 661  LVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPK-SWVLTSGEELTCHAVFSLAF 720
            LVGIS +DCV IFSLHG+VPLLAG LMPICEAFGS  P  +W L +GE ++ HAVFS AF
Sbjct: 670  LVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAF 729

Query: 721  TLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKL 780
            TLLLRLWRF HPP++ V GD  PVG Q +PEYLLLVRN +L  FGKSPKDR   RR SK+
Sbjct: 730  TLLLRLWRFDHPPLDYVLGDVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKV 789

Query: 781  LKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQ 840
            +  S++PIFMDSFP+LK WYRQHQEC+ASILS L  G+PVH IVD+LL+MMF+K N+GG 
Sbjct: 790  IDISVDPIFMDSFPRLKQWYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGS 849

Query: 841  SLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGL 900
               + +SGSS+ S S  +++S +LK+PAWDILEA PFVLDAALTACAHG LSPR+LATGL
Sbjct: 850  QSLTPSSGSSSLSTSGGDDSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGL 909

Query: 901  KDLADFLPASFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGV 960
            K LADFLPA+  T+VSYFS+EVTRG+WKP  MNGTDWPSPAA L+ VEQQI+KILAATGV
Sbjct: 910  KILADFLPATLGTMVSYFSSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGV 969

Query: 961  DVPSLAVGGNSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPI 1020
            DVP L   G S A LPLPLAAL+SLTITYKLDKA+ER L LVGPAL++LAA+C WPC PI
Sbjct: 970  DVPRLPADGISAATLPLPLAALVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPI 1029

Query: 1021 IASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGL-GNSNLNSNGGVGT 1080
            + SLW QKVKRW+DFL+FSASRTVFHHN DAV+QLL+SCFT TLGL   S L S GGVG 
Sbjct: 1030 VTSLWTQKVKRWSDFLIFSASRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYGGVGA 1089

Query: 1081 LLGHGFGSHVLGGMSPVAPGILYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREK 1140
            LLGHGFGS   GG+S  APGILY++VHRS+RD +F+ EEI+SLLM SV+ IA   LP  +
Sbjct: 1090 LLGHGFGSRYSGGISTAAPGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQ 1149

Query: 1141 AEKLKKTKHGMRY--EQVSFASAMSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFL 1200
            AEKLKKTK G RY   QVS + AM RVKLAASLGASLVWISGG  LVQ+L KETLPSWF+
Sbjct: 1150 AEKLKKTKDGSRYGIGQVSLSLAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFI 1209

Query: 1201 SVHSLEREGVEYGGMVAVLGGYALAFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLA 1260
            SVH    E  E GGMV +L GYALA+F++L   F+WG+DS   ASKRR ++L  HLEF+ 
Sbjct: 1210 SVHG---EEDELGGMVPMLRGYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLHLEFMV 1269

Query: 1261 SALDGKFSIGCDWATWRAYVSGFVSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELAL 1317
            SAL+GK S+GCDWATW+AYV+GFVSLMV+C P WV+EVDV ++KRLS  LRQ +E++LAL
Sbjct: 1270 SALEGKISLGCDWATWQAYVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQDLAL 1270

[Close]

BLAST of MS011876 vs. ExPASy TrEMBL
Match: A0A6J1DPP9 (mediator of RNA polymerase II transcription subunit 33B-like OS=Momordica charantia OX=3673 GN=LOC111022676 PE=4 SV=1)

HSP 1 Score: 2575.0 bits (6673), Expect = 0.0e+00
Identity = 1315/1319 (99.70%), Postives = 1315/1319 (99.70%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW
Sbjct: 17   LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 76

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ
Sbjct: 77   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 136

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL
Sbjct: 137  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 196

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
            IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP
Sbjct: 197  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 256

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKTSQQEFRNVMASG 300
            LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKTSQQEFRNVMASG
Sbjct: 257  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKTSQQEFRNVMASG 316

Query: 301  SLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWHN 360
            SLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWHN
Sbjct: 317  SLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWHN 376

Query: 361  TFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDECS 420
            TFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDECS
Sbjct: 377  TFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDECS 436

Query: 421  PSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVGN 480
            PSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVGN
Sbjct: 437  PSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVGN 496

Query: 481  EYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQVV 540
            EYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTS YFWPGYVNARSSQVPRSASGQVV
Sbjct: 497  EYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSVYFWPGYVNARSSQVPRSASGQVV 556

Query: 541  GWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVRG 600
            GWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVRG
Sbjct: 557  GWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVRG 616

Query: 601  WNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP 660
            WNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP
Sbjct: 617  WNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP 676

Query: 661  LLAGQLMPICEAFGSSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDA 720
            LLAGQLMPICEAFG SPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVK DA
Sbjct: 677  LLAGQLMPICEAFGLSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKRDA 736

Query: 721  RPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYR 780
            RPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYR
Sbjct: 737  RPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYR 796

Query: 781  QHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEAS 840
            QHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGG SLTSTTSGSSNSSGSANEEAS
Sbjct: 797  QHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGHSLTSTTSGSSNSSGSANEEAS 856

Query: 841  IKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAE 900
            IKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAE
Sbjct: 857  IKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAE 916

Query: 901  VTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLAA 960
            VTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLAA
Sbjct: 917  VTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLAA 976

Query: 961  LISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSAS 1020
            LISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSAS
Sbjct: 977  LISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSAS 1036

Query: 1021 RTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGIL 1080
            RTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGIL
Sbjct: 1037 RTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGIL 1096

Query: 1081 YLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASAM 1140
            YLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASAM
Sbjct: 1097 YLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASAM 1156

Query: 1141 SRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYAL 1200
            SRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYAL
Sbjct: 1157 SRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYAL 1216

Query: 1201 AFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFV 1260
            AFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFV
Sbjct: 1217 AFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFV 1276

Query: 1261 SLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF 1320
            SLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF
Sbjct: 1277 SLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF 1335

[Close]

BLAST of MS011876 vs. ExPASy TrEMBL
Match: A0A6J1HFH4 (mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita moschata OX=3662 GN=LOC111463830 PE=4 SV=1)

HSP 1 Score: 2408.3 bits (6240), Expect = 0.0e+00
Identity = 1218/1320 (92.27%), Postives = 1267/1320 (95.98%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            +WD+VLELTKSAQ+KN DPLLWAVQLSSSLNSA VSLPS+ELA LLVSHICWDNHVPIMW
Sbjct: 17   VWDTVLELTKSAQEKNSDPLLWAVQLSSSLNSASVSLPSVELAHLLVSHICWDNHVPIMW 76

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            KFLEKAMTA+IVPPLLV+ALLSTRAIPYRKLRPAAYRLYLELLSRHVFSST ++NGPNY 
Sbjct: 77   KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            RIMQTIDDVLHLSQIF LQ CEPGLLMVELFFSIVW LLDASLDDEGLL LPAEERS WL
Sbjct: 137  RIMQTIDDVLHLSQIFGLQTCEPGLLMVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
            IRPQPHDMELDVHDSF EK+TENSE+LLKVNTAKAIEIIGQFLQNKKTARIL LAH+NMP
Sbjct: 197  IRPQPHDMELDVHDSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKT-SQQEFRNVMAS 300
            LHWAGFAQRLQLLAANS VLRNTKLITPEVLL WTSDKHR LS+EGKT SQ EF +VMAS
Sbjct: 257  LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLQWTSDKHRFLSQEGKTKSQLEFHDVMAS 316

Query: 301  GSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWH 360
            GSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLICLIKSL+AVND SWH
Sbjct: 317  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376

Query: 361  NTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDEC 420
            NTF+GLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEE+EGELKEEDEC
Sbjct: 377  NTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDEC 436

Query: 421  SPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVG 480
            SPSK RDEK+ SGK R+GLITSLQMLGEYE LLTPPQSV  +ANQAAAKAVMFISGVAVG
Sbjct: 437  SPSKSRDEKQSSGKRRQGLITSLQMLGEYESLLTPPQSVIVVANQAAAKAVMFISGVAVG 496

Query: 481  NEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQV 540
            NEYYDCVSMNDTP+NCSGNMRHLIVEACISRNLLDTSAYFWPGYVN RSSQVPRSAS QV
Sbjct: 497  NEYYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNTRSSQVPRSASSQV 556

Query: 541  VGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVR 600
            VGWSSFMKGSSLT SMV+ALVATPASSLAEIEKIYEIA+NGSGDEKISAASILCG SLVR
Sbjct: 557  VGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVR 616

Query: 601  GWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 660
            GWNLQEHTVLFI+RLLSPPIPADY GSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV
Sbjct: 617  GWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 676

Query: 661  PLLAGQLMPICEAFGSSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGD 720
            PLLAGQLMPICEAFGSS PKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGD
Sbjct: 677  PLLAGQLMPICEAFGSSTPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGD 736

Query: 721  ARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWY 780
            ARPVGSQLTPEYLLLVRNSQLASFGKSPKDR KVRRLSKLLKFSLEP FMDSFPKLKGWY
Sbjct: 737  ARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWY 796

Query: 781  RQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEA 840
            RQHQECIASI  GLVPGAPVHQ VDALLTMMF+KINRGGQSLTSTTS SSNSSGSANEEA
Sbjct: 797  RQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSASSNSSGSANEEA 856

Query: 841  SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSA 900
            SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIV YFSA
Sbjct: 857  SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVCYFSA 916

Query: 901  EVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLA 960
            EVTRGIWKPAFMNGTDWPSPAATLS+VEQQIKKILAATGVDVPSLA+GG+ PAMLPLPLA
Sbjct: 917  EVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLPLA 976

Query: 961  ALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSA 1020
            ALISLTITYKLDKASERLLALVGPALN+L A CSWPCTPIIASLWAQKVKRWNDFLVFSA
Sbjct: 977  ALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVFSA 1036

Query: 1021 SRTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGI 1080
            SRTVFHHNSDAVVQLLKSCFTSTLGLGNSN+NS GGVG LLGHGFGSHVLGGMSP APGI
Sbjct: 1037 SRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPAAPGI 1096

Query: 1081 LYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASA 1140
            LYLRVHR VRDALF+VEEIVSLLMLSV+DIAV+GLP+EKAEKLKK+KHGMR EQVSFASA
Sbjct: 1097 LYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGLPKEKAEKLKKSKHGMRCEQVSFASA 1156

Query: 1141 MSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYA 1200
            M+RVKLAASLGASLVWISGGSGLVQSL+KETLPSWFLSVHS++REGVEYGGMV VL GYA
Sbjct: 1157 MARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRGYA 1216

Query: 1201 LAFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGF 1260
            LAFFSVLCGTFSWGIDS+SSASKRRAK+LDSHLEFLASALDGKFSIGCDWATWRAYVSGF
Sbjct: 1217 LAFFSVLCGTFSWGIDSISSASKRRAKLLDSHLEFLASALDGKFSIGCDWATWRAYVSGF 1276

Query: 1261 VSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF 1320
            VSL+VRCAPKW++EVD+ +LKRL  GLRQL+EEELALALLESGG+TAMGAAAELII GGF
Sbjct: 1277 VSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGGLTAMGAAAELIIGGGF 1336

[Close]

BLAST of MS011876 vs. ExPASy TrEMBL
Match: A0A1S3BMJ1 (mediator of RNA polymerase II transcription subunit 33B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491278 PE=4 SV=1)

HSP 1 Score: 2405.6 bits (6233), Expect = 0.0e+00
Identity = 1221/1319 (92.57%), Postives = 1270/1319 (96.29%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            LWD+VLE+TKSAQDKNCDPLLWAVQLSS+LNSAGVSLPS+ELAQLLVSHICWDNHVPIMW
Sbjct: 17   LWDTVLEVTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPIMW 76

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            KFLEKAMTA+IVPPLLV+ALLSTRAIPYRKL+PAAYRLYLELLSRHVFSSTSQI GPNYQ
Sbjct: 77   KFLEKAMTARIVPPLLVIALLSTRAIPYRKLQPAAYRLYLELLSRHVFSSTSQIYGPNYQ 136

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            RIMQTIDDVLHL+QIF LQ CEPG+LMVELFFSIVWQLLDASLDDEGLL LP EE+SAWL
Sbjct: 137  RIMQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLDDEGLLALPGEEKSAWL 196

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
            IRPQ HDMELDVHDSF EK+TENSESLLKVNTAKAIEIIGQFLQNKKT RIL LA RNMP
Sbjct: 197  IRPQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQNKKTERILCLALRNMP 256

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKTSQQEFRNVMASG 300
            L WAGFAQRLQLL ANS VL N KLITPEVLLHWTSDK++LLS++GKTSQ EFR+VM+SG
Sbjct: 257  LQWAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQKGKTSQLEFRDVMSSG 316

Query: 301  SLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWHN 360
            SLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLICLIKSL+AVNDTSWHN
Sbjct: 317  SLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDTSWHN 376

Query: 361  TFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDECS 420
            TF+GLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEE+E E K ED+CS
Sbjct: 377  TFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTIIIEEEEVEPK-EDDCS 436

Query: 421  PSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVGN 480
            PSK RDEK+ SG CRKGLITSLQMLGEYE LLTPPQS+ A+ANQAAAKAVMFISGVAVGN
Sbjct: 437  PSKSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVANQAAAKAVMFISGVAVGN 496

Query: 481  EYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQVV 540
            EYYDC SMND P+NCSGNMRHLIVEACISRNLLDTSAYFWPGYVNA SSQVPRSAS QVV
Sbjct: 497  EYYDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNALSSQVPRSASNQVV 556

Query: 541  GWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVRG 600
            GWSSFMKGS LT SMV+ALVATPASSLAEIEKIYEIA+NGSGDEKISAASILCG SLVRG
Sbjct: 557  GWSSFMKGSPLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRG 616

Query: 601  WNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP 660
            W LQEHT LFI+RLL PPIP DYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP
Sbjct: 617  WYLQEHTALFISRLLLPPIPTDYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVP 676

Query: 661  LLAGQLMPICEAFGSSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDA 720
            LLAGQLMPICEAFGSSPPKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDA
Sbjct: 677  LLAGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDA 736

Query: 721  RPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYR 780
            RPVGSQLTPEYLLLVRNSQLASFGKSP DR K RRLSKLLKFSL+PIFMDSFPKLKGWYR
Sbjct: 737  RPVGSQLTPEYLLLVRNSQLASFGKSPNDRLKARRLSKLLKFSLQPIFMDSFPKLKGWYR 796

Query: 781  QHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEAS 840
            QHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEAS
Sbjct: 797  QHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEAS 856

Query: 841  IKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAE 900
            IKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAE
Sbjct: 857  IKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAE 916

Query: 901  VTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLAA 960
            VTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVP LAVGG+SPAMLPLPLAA
Sbjct: 917  VTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPCLAVGGSSPAMLPLPLAA 976

Query: 961  LISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSAS 1020
            LISLTITYKLDKASERLLALVGPALN+LAASCSWPCTPIIASLWAQKVKRWNDFLVFSAS
Sbjct: 977  LISLTITYKLDKASERLLALVGPALNSLAASCSWPCTPIIASLWAQKVKRWNDFLVFSAS 1036

Query: 1021 RTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGIL 1080
            RTVFHHNSDAVVQLLKSCFTSTLGLGNSN N++GGVGTLLGHGFGSHVLGGMSPVAPGIL
Sbjct: 1037 RTVFHHNSDAVVQLLKSCFTSTLGLGNSNGNNSGGVGTLLGHGFGSHVLGGMSPVAPGIL 1096

Query: 1081 YLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASAM 1140
            YLRVHRSVRD LF+VEEIVSLLMLSVRDIAVSGLP+EKAEKLKKTK+GMRYEQVSFASAM
Sbjct: 1097 YLRVHRSVRDVLFVVEEIVSLLMLSVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAM 1156

Query: 1141 SRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYAL 1200
            +RVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHS+EREGV YGGMVAVL G+AL
Sbjct: 1157 ARVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSVEREGVNYGGMVAVLRGHAL 1216

Query: 1201 AFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFV 1260
            AFFSVLCGTFSWGIDS SSASKRRAKILDS+LEFLASALDGKFSIGCDWATWRAYVSGFV
Sbjct: 1217 AFFSVLCGTFSWGIDSSSSASKRRAKILDSYLEFLASALDGKFSIGCDWATWRAYVSGFV 1276

Query: 1261 SLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF 1320
            SL+VRCAP+W++EVD+N+L RLSNGLRQL+EEEL L LLESGGV AMGAAAELIIEGGF
Sbjct: 1277 SLIVRCAPRWLLEVDLNVLTRLSNGLRQLNEEELGLELLESGGVNAMGAAAELIIEGGF 1334

[Close]

BLAST of MS011876 vs. ExPASy TrEMBL
Match: A0A6J1HUY1 (mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita maxima OX=3661 GN=LOC111466930 PE=4 SV=1)

HSP 1 Score: 2399.0 bits (6216), Expect = 0.0e+00
Identity = 1212/1320 (91.82%), Postives = 1266/1320 (95.91%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            +WD+VLELTKSAQ+KN DPLLWAV LSSSLNSA VSLPS+ELAQLLVSHICWDNHVPIMW
Sbjct: 17   VWDTVLELTKSAQEKNSDPLLWAVHLSSSLNSASVSLPSVELAQLLVSHICWDNHVPIMW 76

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            KFLEKAMTA+IVPPLLV+ALLSTRAIPYRKLRPAAYRLYLELLSRHVFSST ++NGPNY 
Sbjct: 77   KFLEKAMTARIVPPLLVIALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTLEVNGPNYP 136

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            RIMQTIDDVLHLSQIF LQ CEPGLL+VELFFSIVW LLDASLDDEGLL LPAEERS WL
Sbjct: 137  RIMQTIDDVLHLSQIFGLQTCEPGLLVVELFFSIVWHLLDASLDDEGLLELPAEERSVWL 196

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
            IRPQPH+MELDVH+SF EK+TENSE+LLKVNTAKAIEIIGQFLQNKKTARIL LAH+NMP
Sbjct: 197  IRPQPHNMELDVHNSFGEKKTENSENLLKVNTAKAIEIIGQFLQNKKTARILCLAHQNMP 256

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKT-SQQEFRNVMAS 300
            LHWAGFAQRLQLLAANS VLRNTKLITPEVLLHWTSDKHR LS+EGKT SQ EF +VMAS
Sbjct: 257  LHWAGFAQRLQLLAANSVVLRNTKLITPEVLLHWTSDKHRFLSQEGKTASQLEFHDVMAS 316

Query: 301  GSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWH 360
            GSLFSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLICLIKSL+AVND SWH
Sbjct: 317  GSLFSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDASWH 376

Query: 361  NTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDEC 420
            NTF+GLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEE+EGELKEEDEC
Sbjct: 377  NTFLGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEEEGELKEEDEC 436

Query: 421  SPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVG 480
            SPSK RDEK+ SGK R+GLIT LQMLGEYE LLTPPQSV  +ANQAAAKAVMFISGVAVG
Sbjct: 437  SPSKSRDEKQSSGKRRQGLITCLQMLGEYESLLTPPQSVIEVANQAAAKAVMFISGVAVG 496

Query: 481  NEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQV 540
            NE YDCVSMNDTP+NCSGNMRHLIVEACISRNLLDTSAYFWPGYVN RSSQVPRSAS Q+
Sbjct: 497  NECYDCVSMNDTPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNTRSSQVPRSASSQI 556

Query: 541  VGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVR 600
            VGWSSFMKGSSLT SMV+ALVATPASSLAEIEKIYEIA+NGSGDEKISAASILCG SLVR
Sbjct: 557  VGWSSFMKGSSLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVR 616

Query: 601  GWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 660
            GWNLQEHTVLFI+RLLSPPIPADY GSDSYLIDYAPFLN+LLVGISSVDCVQIFSLHGMV
Sbjct: 617  GWNLQEHTVLFISRLLSPPIPADYPGSDSYLIDYAPFLNILLVGISSVDCVQIFSLHGMV 676

Query: 661  PLLAGQLMPICEAFGSSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGD 720
            PLLAGQLMPICEAFGSS PKSW+L SGEELTCHAVFSLAFTLLLRLWRFHHPP+ENVKGD
Sbjct: 677  PLLAGQLMPICEAFGSSTPKSWILASGEELTCHAVFSLAFTLLLRLWRFHHPPIENVKGD 736

Query: 721  ARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWY 780
            ARPVGSQLTPEYLLLVRNSQLASFGKSPKDR KVRRLSKLLKFSLEP FMDSFPKLKGWY
Sbjct: 737  ARPVGSQLTPEYLLLVRNSQLASFGKSPKDRLKVRRLSKLLKFSLEPTFMDSFPKLKGWY 796

Query: 781  RQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEA 840
            RQHQECIASI  GLVPGAPVHQ VDALLTMMF+KINRGGQSLTSTTSGSSNSSGSANEEA
Sbjct: 797  RQHQECIASIPPGLVPGAPVHQTVDALLTMMFKKINRGGQSLTSTTSGSSNSSGSANEEA 856

Query: 841  SIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSA 900
            SIKLKVP+WDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIV YFSA
Sbjct: 857  SIKLKVPSWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVCYFSA 916

Query: 901  EVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLA 960
            EVTRGIWKPAFMNGTDWPSPAATLS+VEQQIKKILAATGVDVPSLA+GG+ PAMLPLPLA
Sbjct: 917  EVTRGIWKPAFMNGTDWPSPAATLSVVEQQIKKILAATGVDVPSLALGGSFPAMLPLPLA 976

Query: 961  ALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSA 1020
            ALISLTITYKLDKASERLLALVGPALN+L A CSWPCTPIIASLWAQKVKRWNDFLVFSA
Sbjct: 977  ALISLTITYKLDKASERLLALVGPALNSLVAGCSWPCTPIIASLWAQKVKRWNDFLVFSA 1036

Query: 1021 SRTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGI 1080
            SRTVFHHNSDAVVQLLKSCFTSTLGLGNSN+NS GGVG LLGHGFGSHVLGGMSPVAPGI
Sbjct: 1037 SRTVFHHNSDAVVQLLKSCFTSTLGLGNSNVNSGGGVGALLGHGFGSHVLGGMSPVAPGI 1096

Query: 1081 LYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASA 1140
            LYLRVHR VRDALF+VEEIVSLLMLSV+DIAV+G+P+EKAEKLKK+KHGMR EQVSFASA
Sbjct: 1097 LYLRVHRCVRDALFLVEEIVSLLMLSVKDIAVTGVPKEKAEKLKKSKHGMRCEQVSFASA 1156

Query: 1141 MSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYA 1200
            M+RVKLAASLGASLVWISGGSGLVQSL+KETLPSWFLSVHS++REGVEYGGMV VL GYA
Sbjct: 1157 MARVKLAASLGASLVWISGGSGLVQSLYKETLPSWFLSVHSVDREGVEYGGMVPVLRGYA 1216

Query: 1201 LAFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGF 1260
            LAFFSVLCG FSWGIDS SSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGF
Sbjct: 1217 LAFFSVLCGMFSWGIDSTSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGF 1276

Query: 1261 VSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF 1320
            VSL+VRCAPKW++EVD+ +LKRL  GLRQL+EEELALALLESGG+TAMGAAAELIIEGGF
Sbjct: 1277 VSLLVRCAPKWLLEVDLKVLKRLGKGLRQLNEEELALALLESGGLTAMGAAAELIIEGGF 1336

[Close]

BLAST of MS011876 vs. ExPASy TrEMBL
Match: A0A1S4DXP9 (mediator of RNA polymerase II transcription subunit 33A-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491278 PE=4 SV=1)

HSP 1 Score: 2176.7 bits (5639), Expect = 0.0e+00
Identity = 1107/1197 (92.48%), Postives = 1149/1197 (95.99%), Query Frame = 0


Query: 123  MQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWLIR 182
            MQTIDDVLHL+QIF LQ CEPG+LMVELFFSIVWQLLDASLDDEGLL LP EE+SAWLIR
Sbjct: 1    MQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLDDEGLLALPGEEKSAWLIR 60

Query: 183  PQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMPLH 242
            PQ HDMELDVHDSF EK+TENSESLLKVNTAKAIEIIGQFLQNKKT RIL LA RNMPL 
Sbjct: 61   PQLHDMELDVHDSFGEKKTENSESLLKVNTAKAIEIIGQFLQNKKTERILCLALRNMPLQ 120

Query: 243  WAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKTSQQEFRNVMASGSL 302
            WAGFAQRLQLL ANS VL N KLITPEVLLHWTSDK++LLS++GKTSQ EFR+VM+SGSL
Sbjct: 121  WAGFAQRLQLLGANSVVLGNAKLITPEVLLHWTSDKNKLLSQKGKTSQLEFRDVMSSGSL 180

Query: 303  FSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWHNTF 362
            FSSAGQSHGVNWS LWLPIDLFLEDAMDGSQVLATSAVERLICLIKSL+AVNDTSWHNTF
Sbjct: 181  FSSAGQSHGVNWSALWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLRAVNDTSWHNTF 240

Query: 363  MGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDECSPS 422
            +GLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSI+TLAVTIIIEE+E E K ED+CSPS
Sbjct: 241  LGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSISTLAVTIIIEEEEVEPK-EDDCSPS 300

Query: 423  KGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVGNEY 482
            K RDEK+ SG CRKGLITSLQMLGEYE LLTPPQS+ A+ANQAAAKAVMFISGVAVGNEY
Sbjct: 301  KSRDEKQSSGMCRKGLITSLQMLGEYESLLTPPQSIIAVANQAAAKAVMFISGVAVGNEY 360

Query: 483  YDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQVVGW 542
            YDC SMND P+NCSGNMRHLIVEACISRNLLDTSAYFWPGYVNA SSQVPRSAS QVVGW
Sbjct: 361  YDCASMNDAPINCSGNMRHLIVEACISRNLLDTSAYFWPGYVNALSSQVPRSASNQVVGW 420

Query: 543  SSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVRGWN 602
            SSFMKGS LT SMV+ALVATPASSLAEIEKIYEIA+NGSGDEKISAASILCG SLVRGW 
Sbjct: 421  SSFMKGSPLTPSMVNALVATPASSLAEIEKIYEIAINGSGDEKISAASILCGASLVRGWY 480

Query: 603  LQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLL 662
            LQEHT LFI+RLL PPIP DYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLL
Sbjct: 481  LQEHTALFISRLLLPPIPTDYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMVPLL 540

Query: 663  AGQLMPICEAFGSSPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARP 722
            AGQLMPICEAFGSSPPKSW+LTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARP
Sbjct: 541  AGQLMPICEAFGSSPPKSWILTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKGDARP 600

Query: 723  VGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLKFSLEPIFMDSFPKLKGWYRQH 782
            VGSQLTPEYLLLVRNSQLASFGKSP DR K RRLSKLLKFSL+PIFMDSFPKLKGWYRQH
Sbjct: 601  VGSQLTPEYLLLVRNSQLASFGKSPNDRLKARRLSKLLKFSLQPIFMDSFPKLKGWYRQH 660

Query: 783  QECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIK 842
            QECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIK
Sbjct: 661  QECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANEEASIK 720

Query: 843  LKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAEVT 902
            LKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAEVT
Sbjct: 721  LKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYFSAEVT 780

Query: 903  RGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLPLAALI 962
            RGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVP LAVGG+SPAMLPLPLAALI
Sbjct: 781  RGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPCLAVGGSSPAMLPLPLAALI 840

Query: 963  SLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRT 1022
            SLTITYKLDKASERLLALVGPALN+LAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRT
Sbjct: 841  SLTITYKLDKASERLLALVGPALNSLAASCSWPCTPIIASLWAQKVKRWNDFLVFSASRT 900

Query: 1023 VFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAPGILYL 1082
            VFHHNSDAVVQLLKSCFTSTLGLGNSN N++GGVGTLLGHGFGSHVLGGMSPVAPGILYL
Sbjct: 901  VFHHNSDAVVQLLKSCFTSTLGLGNSNGNNSGGVGTLLGHGFGSHVLGGMSPVAPGILYL 960

Query: 1083 RVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFASAMSR 1142
            RVHRSVRD LF+VEEIVSLLMLSVRDIAVSGLP+EKAEKLKKTK+GMRYEQVSFASAM+R
Sbjct: 961  RVHRSVRDVLFVVEEIVSLLMLSVRDIAVSGLPKEKAEKLKKTKYGMRYEQVSFASAMAR 1020

Query: 1143 VKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGGYALAF 1202
            VKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHS+EREGV YGGMVAVL G+ALAF
Sbjct: 1021 VKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSVEREGVNYGGMVAVLRGHALAF 1080

Query: 1203 FSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLASALDGKFSIGCDWATWRAYVSGFVSL 1262
            FSVLCGTFSWGIDS SSASKRRAKILDS+LEFLASALDGKFSIGCDWATWRAYVSGFVSL
Sbjct: 1081 FSVLCGTFSWGIDSSSSASKRRAKILDSYLEFLASALDGKFSIGCDWATWRAYVSGFVSL 1140

Query: 1263 MVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELIIEGGF 1320
            +VRCAP+W++EVD+N+L RLSNGLRQL+EEEL L LLESGGV AMGAAAELIIEGGF
Sbjct: 1141 IVRCAPRWLLEVDLNVLTRLSNGLRQLNEEELGLELLESGGVNAMGAAAELIIEGGF 1196

[Close]

BLAST of MS011876 vs. TAIR 10
Match: AT3G23590.1 (REF4-related 1 )

HSP 1 Score: 1506.5 bits (3899), Expect = 0.0e+00
Identity = 778/1319 (58.98%), Postives = 991/1319 (75.13%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            +WD V+ELTK AQ+   DP LWA QLSS+L    V LPS ELA+++VS+ICWDN+VPI+W
Sbjct: 9    VWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICWDNNVPIVW 68

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            KFLE+AM  K+V PL+V+ALL+ R +P R  + AAYR+YLELL R++F+    I+GP+YQ
Sbjct: 69   KFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKDHISGPHYQ 128

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            ++M ++ ++L LS++F L   +PG+L+VE  F +V QLLDA+L DEGLL L  +  S WL
Sbjct: 129  KVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELSQDSSSQWL 188

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
            ++ Q  DME+D  + ++EK T + E L  +NT  AIE+I +FL+N   AR+LYL   N  
Sbjct: 189  VKSQ--DMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYLVSSNRA 248

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGK-TSQQEFRNVMAS 300
              W  F Q++QLL  NS+ L+++K++    LL   S++    S + K TS ++   ++  
Sbjct: 249  SKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKSNAIVDF 308

Query: 301  GSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWH 360
            GSL S AG  HG + S+LWLP+DL  EDAMDG QV  TSA+E +  L K+L+ +N ++WH
Sbjct: 309  GSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEINGSTWH 368

Query: 361  NTFMGLWIAALRLIQRERDPSEGPVPRLDTCLCMLLSITTLAVTIIIEEDEGELKEEDEC 420
            +TF+GLWIAALRL+QRERDP EGP+PRLDT LCM L I  L V  +IEE + E   E   
Sbjct: 369  DTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYESVME--- 428

Query: 421  SPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTAIANQAAAKAVMFISGVAVG 480
                         K R  L+TSLQ+LG++ GLL PP+ V + AN+AA KA++F+SG  VG
Sbjct: 429  -------------KLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFLSGGNVG 488

Query: 481  NEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFWPGYVNARSSQVPRSASGQV 540
               +D ++M D PVNCSGNMRHLIVEACI+RN+LD SAY WPGYVN R +Q+P+S   +V
Sbjct: 489  KSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQSLPNEV 548

Query: 541  VGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNGSGDEKISAASILCGESLVR 600
              WSSF+KG+ L  +MV+ LV+ PASSLAE+EK++E+AV GS DEKISAA++LCG SL R
Sbjct: 549  PCWSSFVKGAPLNAAMVNTLVSVPASSLAELEKLFEVAVKGSDDEKISAATVLCGASLTR 608

Query: 601  GWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVLLVGISSVDCVQIFSLHGMV 660
            GWN+QEHTV ++ RLLSPP+PADYS ++++LI YA  LNV++VGI SVD +QIFSLHGMV
Sbjct: 609  GWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDSIQIFSLHGMV 668

Query: 661  PLLAGQLMPICEAFGS-SPPKSWVLTSGEELTCHAVFSLAFTLLLRLWRFHHPPVENVKG 720
            P LA  LMPICE FGS +P  SW L SGE ++ ++VFS AFTLLL+LWRF+HPP+E+  G
Sbjct: 669  PQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRFNHPPIEHGVG 728

Query: 721  DARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKLLK-FSLEPIFMDSFPKLKG 780
            D   VGSQLTPE+LL VRNS L S     +DR + +RLS++ +  S +P+F+DSFPKLK 
Sbjct: 729  DVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNR-KRLSEVARAASCQPVFVDSFPKLKV 788

Query: 781  WYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQSLTSTTSGSSNSSGSANE 840
            WYRQHQ CIA+ LSGL  G+PVHQ V+ALL M F K+ RG Q+L    SG+S+SSG+A+E
Sbjct: 789  WYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKV-RGSQTLNPVNSGTSSSSGAASE 848

Query: 841  EASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGLKDLADFLPASFATIVSYF 900
            +++I+ + PAWDIL+A P+V+DAALTAC HGRLSPR LATGLKDLADFLPAS ATIVSYF
Sbjct: 849  DSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPASLATIVSYF 908

Query: 901  SAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGVDVPSLAVGGNSPAMLPLP 960
            SAEV+RG+WKP FMNG DWPSPA  LS VE+ I KILA TGVD+PSLA GG+SPA LPLP
Sbjct: 909  SAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGGSSPATLPLP 968

Query: 961  LAALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPIIASLWAQKVKRWNDFLVF 1020
            LAA +SLTITYK+DKASER L L GPAL  LAA C WPC PI+ASLW QK KRW DFLVF
Sbjct: 969  LAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKAKRWFDFLVF 1028

Query: 1021 SASRTVFHHNSDAVVQLLKSCFTSTLGLGNSNLNSNGGVGTLLGHGFGSHVLGGMSPVAP 1080
            SASRTVF HN DAV+QLL++CF++TLGL  + ++++GGVG LLGHGFGSH  GG+SPVAP
Sbjct: 1029 SASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHFYGGISPVAP 1088

Query: 1081 GILYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREKAEKLKKTKHGMRYEQVSFA 1140
            GILYLR++R++RD + + EEI+SLL+ SV DIA + L +EK EKLK  K+G RY Q S A
Sbjct: 1089 GILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNGSRYGQSSLA 1148

Query: 1141 SAMSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFLSVHSLEREGVEYGGMVAVLGG 1200
            +AM++VKLAASL ASLVW++GG G+V  L KET+PSWFLS    +RE      +VA L G
Sbjct: 1149 TAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGP-SDLVAELRG 1208

Query: 1201 YALAFFSVLCGTFSWGIDSVSSASKRRAK-ILDSHLEFLASALDGKFSIGCDWATWRAYV 1260
            +ALA+F VLCG  +WG+DS SSASKRR + IL SHLEF+ASALDGK S+GC+ ATWR Y+
Sbjct: 1209 HALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCETATWRTYI 1268

Query: 1261 SGFVSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELALALLESGGVTAMGAAAELII 1316
            SG VSLMV C P WV E+D  +LK LSNGLR+  ++ELA+ LL  GG+  M  AA+ II
Sbjct: 1269 SGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTMDYAADFII 1305

[Close]

BLAST of MS011876 vs. TAIR 10
Match: AT2G48110.1 (reduced epidermal fluorescence 4 )

HSP 1 Score: 1489.2 bits (3854), Expect = 0.0e+00
Identity = 803/1340 (59.93%), Postives = 964/1340 (71.94%), Query Frame = 0


Query: 1    LWDSVLELTKSAQDKNCDPLLWAVQLSSSLNSAGVSLPSIELAQLLVSHICWDNHVPIMW 60
            LW+SV  L +SAQ+KN DPL WA+QL  +L SAG+SLPS +LAQ LV+HI W+NH P+ W
Sbjct: 10   LWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSPLSW 69

Query: 61   KFLEKAMTAKIVPPLLVVALLSTRAIPYRKLRPAAYRLYLELLSRHVFSSTSQINGPNYQ 120
            K LEKA++  IVPPLLV+ALLS R IP RKL PAAYRLY+ELL RH FS    I  P Y 
Sbjct: 70   KLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAPGYH 129

Query: 121  RIMQTIDDVLHLSQIFSLQACEPGLLMVELFFSIVWQLLDASLDDEGLLVLPAEERSAWL 180
            + M +IDD+LHLS+ F +Q  EPG +++   FSIVW+LLDASLD+EGLL L + +RS W 
Sbjct: 130  KTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRSKW- 189

Query: 181  IRPQPHDMELDVHDSFSEKRTENSESLLKVNTAKAIEIIGQFLQNKKTARILYLAHRNMP 240
                PHDM+LD  ++ S KR EN ++L K NT  AIE+I +FLQNK T+RIL+LA +NM 
Sbjct: 190  -PSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM- 249

Query: 241  LHWAGFAQRLQLLAANSAVLRNTKLITPEVLLHWTSDKHRLLSREGKT-SQQEFRNVMAS 300
                                                        E KT  + EF  +++S
Sbjct: 250  --------------------------------------------ESKTIPRGEFHAIVSS 309

Query: 301  GSLFSSAGQSHGVNWSTLWLPIDLFLEDAMDGSQVLATSAVERLICLIKSLQAVNDTSWH 360
            GS  +          S LWLPIDLF ED MDG+Q  A SAVE L  L+K+LQA N TSWH
Sbjct: 310  GSKLALTSD------SALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSWH 369

Query: 361  NTFMGLWIAALRLIQR-------------------ERDPSEGPVPRLDTCLCMLLSITTL 420
            + F+ LW+AALRL+QR                   ERDP EGPVPR DT LC+LLS+T L
Sbjct: 370  DAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTPL 429

Query: 421  AVTIIIEEDEGELKEEDECSPSKGRDEKKCSGKCRKGLITSLQMLGEYEGLLTPPQSVTA 480
            AV  IIEE+E +  ++   SPS    EKK  GKCR+GLI SLQ LG+YE LLTPP+SV +
Sbjct: 430  AVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQS 489

Query: 481  IANQAAAKAVMFISGVAVGNEYYDCVSMNDTPVNCSGNMRHLIVEACISRNLLDTSAYFW 540
            +ANQAAAKA+MFISG+   N  Y+  SM+++   C           C  R  L T   F 
Sbjct: 490  VANQAAAKAIMFISGITNSNGSYENTSMSESASGC-----------CKVRFSLFTLKMFV 549

Query: 541  PGYVNARSSQVPRSASGQVVGWSSFMKGSSLTLSMVDALVATPASSLAEIEKIYEIAVNG 600
               V    +         +  WS  MKGS LT S+ ++L+ TPASSLAEIEK+YE+A  G
Sbjct: 550  VMGVYLLCN---------ISCWSLVMKGSPLTPSLTNSLITTPASSLAEIEKMYEVATTG 609

Query: 601  SGDEKISAASILCGESLVRGWNLQEHTVLFIARLLSPPIPADYSGSDSYLIDYAPFLNVL 660
            S DEKI+ ASILCG SL RGW++QEH ++FI  LLSPP PAD SGS S+LI+ APFLNVL
Sbjct: 610  SEDEKIAVASILCGASLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAPFLNVL 669

Query: 661  LVGISSVDCVQIFSLHGMVPLLAGQLMPICEAFGSSPPK-SWVLTSGEELTCHAVFSLAF 720
            LVGIS +DCV IFSLHG+VPLLAG LMPICEAFGS  P  +W L +GE ++ HAVFS AF
Sbjct: 670  LVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGVPNITWTLPTGELISSHAVFSTAF 729

Query: 721  TLLLRLWRFHHPPVENVKGDARPVGSQLTPEYLLLVRNSQLASFGKSPKDRFKVRRLSKL 780
            TLLLRLWRF HPP++ V GD  PVG Q +PEYLLLVRN +L  FGKSPKDR   RR SK+
Sbjct: 730  TLLLRLWRFDHPPLDYVLGDVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARRRFSKV 789

Query: 781  LKFSLEPIFMDSFPKLKGWYRQHQECIASILSGLVPGAPVHQIVDALLTMMFRKINRGGQ 840
            +  S++PIFMDSFP+LK WYRQHQEC+ASILS L  G+PVH IVD+LL+MMF+K N+GG 
Sbjct: 790  IDISVDPIFMDSFPRLKQWYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKANKGGS 849

Query: 841  SLTSTTSGSSNSSGSANEEASIKLKVPAWDILEATPFVLDAALTACAHGRLSPRDLATGL 900
               + +SGSS+ S S  +++S +LK+PAWDILEA PFVLDAALTACAHG LSPR+LATGL
Sbjct: 850  QSLTPSSGSSSLSTSGGDDSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPRELATGL 909

Query: 901  KDLADFLPASFATIVSYFSAEVTRGIWKPAFMNGTDWPSPAATLSIVEQQIKKILAATGV 960
            K LADFLPA+  T+VSYFS+EVTRG+WKP  MNGTDWPSPAA L+ VEQQI+KILAATGV
Sbjct: 910  KILADFLPATLGTMVSYFSSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKILAATGV 969

Query: 961  DVPSLAVGGNSPAMLPLPLAALISLTITYKLDKASERLLALVGPALNTLAASCSWPCTPI 1020
            DVP L   G S A LPLPLAAL+SLTITYKLDKA+ER L LVGPAL++LAA+C WPC PI
Sbjct: 970  DVPRLPADGISAATLPLPLAALVSLTITYKLDKATERFLVLVGPALDSLAAACPWPCMPI 1029

Query: 1021 IASLWAQKVKRWNDFLVFSASRTVFHHNSDAVVQLLKSCFTSTLGL-GNSNLNSNGGVGT 1080
            + SLW QKVKRW+DFL+FSASRTVFHHN DAV+QLL+SCFT TLGL   S L S GGVG 
Sbjct: 1030 VTSLWTQKVKRWSDFLIFSASRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCSYGGVGA 1089

Query: 1081 LLGHGFGSHVLGGMSPVAPGILYLRVHRSVRDALFMVEEIVSLLMLSVRDIAVSGLPREK 1140
            LLGHGFGS   GG+S  APGILY++VHRS+RD +F+ EEI+SLLM SV+ IA   LP  +
Sbjct: 1090 LLGHGFGSRYSGGISTAAPGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATRELPAGQ 1149

Query: 1141 AEKLKKTKHGMRY--EQVSFASAMSRVKLAASLGASLVWISGGSGLVQSLFKETLPSWFL 1200
            AEKLKKTK G RY   QVS + AM RVKLAASLGASLVWISGG  LVQ+L KETLPSWF+
Sbjct: 1150 AEKLKKTKDGSRYGIGQVSLSLAMRRVKLAASLGASLVWISGGLNLVQALIKETLPSWFI 1209

Query: 1201 SVHSLEREGVEYGGMVAVLGGYALAFFSVLCGTFSWGIDSVSSASKRRAKILDSHLEFLA 1260
            SVH    E  E GGMV +L GYALA+F++L   F+WG+DS   ASKRR ++L  HLEF+ 
Sbjct: 1210 SVHG---EEDELGGMVPMLRGYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLHLEFMV 1269

Query: 1261 SALDGKFSIGCDWATWRAYVSGFVSLMVRCAPKWVVEVDVNILKRLSNGLRQLSEEELAL 1317
            SAL+GK S+GCDWATW+AYV+GFVSLMV+C P WV+EVDV ++KRLS  LRQ +E++LAL
Sbjct: 1270 SALEGKISLGCDWATWQAYVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNEQDLAL 1270

The following BLAST results are available for this feature:

BLAST of MS011876 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155567.1	0.0e+00	99.70	mediator of RNA polymerase II transcription subunit 33B-like [Momordica charanti...	[more]
XP_038887593.1	0.0e+00	93.33	mediator of RNA polymerase II transcription subunit 33B isoform X1 [Benincasa hi...	[more]
KAG6571443.1	0.0e+00	92.35	Mediator of RNA polymerase II transcription subunit 33A, partial [Cucurbita argy...	[more]
XP_023554812.1	0.0e+00	92.27	mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita pepo sub...	[more]
XP_022963527.1	0.0e+00	92.27	mediator of RNA polymerase II transcription subunit 33B-like [Cucurbita moschata...	[more]

BLAST of MS011876 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUG9	0.0e+00	58.98	Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana ...	[more]
F4IN69	0.0e+00	59.93	Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana ...	[more]

BLAST of MS011876 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPP9	0.0e+00	99.70	mediator of RNA polymerase II transcription subunit 33B-like OS=Momordica charan...	[more]
A0A6J1HFH4	0.0e+00	92.27	mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita moscha...	[more]
A0A1S3BMJ1	0.0e+00	92.57	mediator of RNA polymerase II transcription subunit 33B-like isoform X1 OS=Cucum...	[more]
A0A6J1HUY1	0.0e+00	91.82	mediator of RNA polymerase II transcription subunit 33B-like OS=Cucurbita maxima...	[more]
A0A1S4DXP9	0.0e+00	92.48	mediator of RNA polymerase II transcription subunit 33A-like isoform X2 OS=Cucum...	[more]

BLAST of MS011876 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23590.1	0.0e+00	58.98	REF4-related 1	[more]
AT2G48110.1	0.0e+00	59.93	reduced epidermal fluorescence 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33739:SF11	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 33A-LIKE	coord: 2..1318
IPR039638	Mediator of RNA polymerase II transcription subunit 33A/B	PANTHER	PTHR33739	OS07G0681500 PROTEIN	coord: 2..1318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS011876.1	MS011876.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000762	regulation of phenylpropanoid metabolic process
cellular_component	GO:0016592	mediator complex