MS009404 (gene) Bitter gourd (TR) v1

Overview


Name	MS009404
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	methyl-CpG-binding domain-containing protein 11-like
Location	scaffold813: 1102378 .. 1104130 (-)
RNA-Seq Expression	MS009404
Synteny	MS009404

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACGAAGTGGCGGTGGAGAGCAAAGAACTGCTTCAAAATCCAGTTGAAGGAGCTCCAGATGAAGCTGCTGTTGCTTCTGTGGAACTTCCAGCTCCACCCGCTTGGAAGAAGCTGGTTTTTCTCACTCTCTTGAGCTTTCTCATTCTTTTCGATAGTTTTTCTCTCTTGTTTGAGTTAATTCTGCTTCTGGGTCTCCCTAATTCTTGCTCAATTTTTAGATTTTTTCTCGTTGCATCACTCTTTTCTTTGTGAATTGTCCTCTGGGATTGCTTGCTGCTGAGTTTTAGTTCTAGGGTTTGTCGATTTAATCGCTCTTTGCCTTTACGCTTACTCTTAGGGTTTTTCCCCAATTTAAGACGCATTCAGTTTAGAGAGAGAGAGAGAGAGAGAGAGATGCTGTAAACTTGAAACTGTAAAGTATACTTCGGTATCCTGAGACGCCGTGATTTCAGGTACAAGTTTCAGATGTATGTCGAGAAAGAAATCCGATTATGAACTAGACAATGAAGATGAGGAATTGGTAGTCTCGAACTTAAGCTTTAATCAGGAGATAAACTTTAAGCTTTCGCAGTTGTGCATAGCAATAACGATACTGTTTTGAACTCCAATCGTGCCCTGTCTTTTAGAGCCTTATTTGATATTTTTGTTTCTTATGTTCTTAATCTACAAACTGGGATACAAAACCATCTATGTAAAGAGCTTCGATGATTTTCTTCTCTTTTTTTTCTTTCTCGTTTTCCACTTTTAAGATGACAGTCAAAATGCTTCATATTATATTAAATACATTCTTTTGCAGTTTGTACCCAGGAAGGGAGGTGCACCAAAAAAGAATGAGATCGTATTTGTAGCACCAACTGGTGAGGAGATCAGTACTAGAAAACAGCTCGAGCAGTACTTAAAATCGCACCCTGGAGATGTTGCAATATCGGATTTCGATTGGAGTACTGGTGAGACACCTAGGAGATCTGCCAGGATTAGTGAGAAGGCCAAGGCAACTCCACCACAGGAAGAGCCCTCAAGGAAACGAGCTAGAAGATCTCCAGGTTCAAAGAAGAAGGAACACAATGAAATGGAGAAGGGTGCAGAGGAAACTGATATTAAAGATGCTGAAATGTCGGAGAAGGTTCATGCTGAAACTGAGAAAGAAAAGGAAGACTTCAAGGATGAAGAGCCTAAAAATGAAGATGAAACAAAAGAAAAGGAAATTGAAACTGCGAAGGATGAAGAGCCTAAAAATGAAGATGAAACCAAAGAAAAAGAAATTGAAACTGCCAAGGATGAAGAGGCCAAGAAGGAAGATGAAGAAACAAAAGAAACTGAACAGAGAAACACCACAGAGGTGGAAACCTTCCAAAATAGCAAAGAGGACACTTGCATTGAAAATGTGCCTAGCGACAAAACAAAAACCAAGAACGGTCAGTTAGATGCTGAAGATGGAAAAGAAGCGGAAGATCAAAGTCATGGGCATGTTCAAATTCGAGAGGTTGCCACAGTTGGCGAAAATGTGGCATTGGAGGTTGGTCAAGAGAAAGGGGAAAACATATCACAAACTGAAGCTGAAAAGGATATTGATTCCTGCTGTATGAAACAGGACAAACCAGACGTTGGTAATATTAAGGAAAATGGAACTGGAATAACACCAGCATCCGAGGGAGCAATCACGGAACACGAAGACGCACAAAAGCACGAGGGAAAACACGACGTACAGGCCAAGAACAGAGGGAATATAAACGAAAACGAGGTGACT

mRNA sequence

ATGGAAAACGAAGTGGCGGTGGAGAGCAAAGAACTGCTTCAAAATCCAGTTGAAGGAGCTCCAGATGAAGCTGCTGTTGCTTCTGTGGAACTTCCAGCTCCACCCGCTTGGAAGAAGCTGTTTGTACCCAGGAAGGGAGGTGCACCAAAAAAGAATGAGATCGTATTTGTAGCACCAACTGGTGAGGAGATCAGTACTAGAAAACAGCTCGAGCAGTACTTAAAATCGCACCCTGGAGATGTTGCAATATCGGATTTCGATTGGAGTACTGGTGAGACACCTAGGAGATCTGCCAGGATTAGTGAGAAGGCCAAGGCAACTCCACCACAGGAAGAGCCCTCAAGGAAACGAGCTAGAAGATCTCCAGGTTCAAAGAAGAAGGAACACAATGAAATGGAGAAGGGTGCAGAGGAAACTGATATTAAAGATGCTGAAATGTCGGAGAAGGTTCATGCTGAAACTGAGAAAGAAAAGGAAGACTTCAAGGATGAAGAGCCTAAAAATGAAGATGAAACAAAAGAAAAGGAAATTGAAACTGCGAAGGATGAAGAGCCTAAAAATGAAGATGAAACCAAAGAAAAAGAAATTGAAACTGCCAAGGATGAAGAGGCCAAGAAGGAAGATGAAGAAACAAAAGAAACTGAACAGAGAAACACCACAGAGGTGGAAACCTTCCAAAATAGCAAAGAGGACACTTGCATTGAAAATGTGCCTAGCGACAAAACAAAAACCAAGAACGGTCAGTTAGATGCTGAAGATGGAAAAGAAGCGGAAGATCAAAGTCATGGGCATGTTCAAATTCGAGAGGTTGCCACAGTTGGCGAAAATGTGGCATTGGAGGTTGGTCAAGAGAAAGGGGAAAACATATCACAAACTGAAGCTGAAAAGGATATTGATTCCTGCTGTATGAAACAGGACAAACCAGACGTTGGTAATATTAAGGAAAATGGAACTGGAATAACACCAGCATCCGAGGGAGCAATCACGGAACACGAAGACGCACAAAAGCACGAGGGAAAACACGACGTACAGGCCAAGAACAGAGGGAATATAAACGAAAACGAGGTGACT

Coding sequence (CDS)

ATGGAAAACGAAGTGGCGGTGGAGAGCAAAGAACTGCTTCAAAATCCAGTTGAAGGAGCTCCAGATGAAGCTGCTGTTGCTTCTGTGGAACTTCCAGCTCCACCCGCTTGGAAGAAGCTGTTTGTACCCAGGAAGGGAGGTGCACCAAAAAAGAATGAGATCGTATTTGTAGCACCAACTGGTGAGGAGATCAGTACTAGAAAACAGCTCGAGCAGTACTTAAAATCGCACCCTGGAGATGTTGCAATATCGGATTTCGATTGGAGTACTGGTGAGACACCTAGGAGATCTGCCAGGATTAGTGAGAAGGCCAAGGCAACTCCACCACAGGAAGAGCCCTCAAGGAAACGAGCTAGAAGATCTCCAGGTTCAAAGAAGAAGGAACACAATGAAATGGAGAAGGGTGCAGAGGAAACTGATATTAAAGATGCTGAAATGTCGGAGAAGGTTCATGCTGAAACTGAGAAAGAAAAGGAAGACTTCAAGGATGAAGAGCCTAAAAATGAAGATGAAACAAAAGAAAAGGAAATTGAAACTGCGAAGGATGAAGAGCCTAAAAATGAAGATGAAACCAAAGAAAAAGAAATTGAAACTGCCAAGGATGAAGAGGCCAAGAAGGAAGATGAAGAAACAAAAGAAACTGAACAGAGAAACACCACAGAGGTGGAAACCTTCCAAAATAGCAAAGAGGACACTTGCATTGAAAATGTGCCTAGCGACAAAACAAAAACCAAGAACGGTCAGTTAGATGCTGAAGATGGAAAAGAAGCGGAAGATCAAAGTCATGGGCATGTTCAAATTCGAGAGGTTGCCACAGTTGGCGAAAATGTGGCATTGGAGGTTGGTCAAGAGAAAGGGGAAAACATATCACAAACTGAAGCTGAAAAGGATATTGATTCCTGCTGTATGAAACAGGACAAACCAGACGTTGGTAATATTAAGGAAAATGGAACTGGAATAACACCAGCATCCGAGGGAGCAATCACGGAACACGAAGACGCACAAAAGCACGAGGGAAAACACGACGTACAGGCCAAGAACAGAGGGAATATAAACGAAAACGAGGTGACT

Protein sequence

MENEVAVESKELLQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPTGEEISTRKQLEQYLKSHPGDVAISDFDWSTGETPRRSARISEKAKATPPQEEPSRKRARRSPGSKKKEHNEMEKGAEETDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIETAKDEEPKNEDETKEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQNSKEDTCIENVPSDKTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVGENVALEVGQEKGENISQTEAEKDIDSCCMKQDKPDVGNIKENGTGITPASEGAITEHEDAQKHEGKHDVQAKNRGNINENEVT

Homology

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BLAST of MS009404 vs. NCBI nr
Match: XP_022152856.1 (methyl-CpG-binding domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 594.7 bits (1532), Expect = 5.1e-166
Identity = 332/357 (93.00%), Postives = 333/357 (93.28%), Query Frame = 0


Query: 1   MENEVAVESKELLQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT 60
           MENEVAVESKE LQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT
Sbjct: 1   MENEVAVESKEPLQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT 60

Query: 61  GEEISTRKQLEQYLKSHPGDVAISDFDWSTGETPRRSARISEKAKATPPQEEPSRKRARR 120
           GEEISTRKQLEQYLKSHPG VAISDFDWSTGETPRRSARISEKAKA PPQEEPSRKRARR
Sbjct: 61  GEEISTRKQLEQYLKSHPGHVAISDFDWSTGETPRRSARISEKAKAXPPQEEPSRKRARR 120

Query: 121 SPGSKKKEHNEMEKGAEETDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIETA 180
           SPGSKKKEHNEMEKGAEETDIKDAEMSEKVHAETEKEKED                   +
Sbjct: 121 SPGSKKKEHNEMEKGAEETDIKDAEMSEKVHAETEKEKED-------------------S 180

Query: 181 KDEEPKNEDETKEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQNSKEDTCIENVPSD 240
           KDEEPKNEDETKEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQN KEDTCIENVPSD
Sbjct: 181 KDEEPKNEDETKEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQNRKEDTCIENVPSD 240

Query: 241 KTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVGENVALEVGQEKGENISQTEAEKDIDS 300
           KTKTKNGQLDAEDGKEAEDQSHGHVQIREVATV ENVALEVGQEKGENISQTEAEKDIDS
Sbjct: 241 KTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVCENVALEVGQEKGENISQTEAEKDIDS 300

Query: 301 CCMKQDKPDVGNIKENGTGITPASEGAITEHEDAQKHEGKHDVQAKNRGNINENEVT 358
           CCMKQDKPDVGNIKENGTGITPASEGAITEHEDAQKHEGKHDVQAKNRGNINENEVT
Sbjct: 301 CCMKQDKPDVGNIKENGTGITPASEGAITEHEDAQKHEGKHDVQAKNRGNINENEVT 338

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BLAST of MS009404 vs. NCBI nr
Match: XP_038897995.1 (methyl-CpG-binding domain-containing protein 11-like [Benincasa hispida])

HSP 1 Score: 444.1 bits (1141), Expect = 1.1e-120
Identity = 263/379 (69.39%), Postives = 309/379 (81.53%), Query Frame = 0


Query: 1   MENEVAVESKELLQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT 60
           MEN++A+++KE  QNPVEG+ DE   ASV+LPAPP+WKKLF+P+KGGAP+KN+IVF+APT
Sbjct: 1   MENQLALQNKEHSQNPVEGSKDE---ASVQLPAPPSWKKLFLPKKGGAPRKNDIVFIAPT 60

Query: 61  GEEISTRKQLEQYLKSHPGDVAISDFDWSTGETPRRSARISEKAKATPPQEEPSRKRARR 120
           GEEIS +KQLEQYLKSHPGDVA+SDFDWSTGETPRRS RISEK KATPPQEEP RKRAR+
Sbjct: 61  GEEISNKKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKTKATPPQEEPPRKRARK 120

Query: 121 SPGSKKKEHNEMEK--GAEETDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIE 180
           SPGSKKKEH+E EK  G +ET+IK AEMSEK +AETEKEKE+ KDEEP  EDETK+KE+E
Sbjct: 121 SPGSKKKEHSETEKSEGVKETEIKGAEMSEKENAETEKEKENSKDEEPNKEDETKQKELE 180

Query: 181 TAKDEEPKNEDETKEKEIETA-----------KDEEAKKEDEETKETEQRNTTEVETFQN 240
           TAKDEEPKNE E +EKEIETA           KDEEAKKED ++KETEQ+ TTEVET Q+
Sbjct: 181 TAKDEEPKNEGEKEEKEIETAKNEEPRKEDETKDEEAKKEDVKSKETEQKTTTEVETSQD 240

Query: 241 SKEDTCIENVPSDKTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVGENVALEVGQEKGE 300
           +KE+T IENVP D T+TKNGQLD ED ++ ED+S+ +VQ +E  T GE VALEVGQ+KGE
Sbjct: 241 NKENTGIENVPGDATETKNGQLDTEDDEKVEDRSYENVQNQEDVTAGEKVALEVGQDKGE 300

Query: 301 NISQTEAEKDIDSCCMKQDKPDVGNIKEN---------GTGITPASEGAITEHEDAQKHE 358
              QTEAEK IDSCCMKQ+K +VGN KEN         GT  TPASEG +TE+ED QKH 
Sbjct: 301 KGPQTEAEKAIDSCCMKQEKANVGNTKENGVAEQENCSGTEKTPASEGMVTENEDTQKHG 360

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BLAST of MS009404 vs. NCBI nr
Match: XP_004135849.1 (methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KGN45272.1 hypothetical protein Csa_016120 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 5.1e-105
Identity = 241/368 (65.49%), Postives = 282/368 (76.63%), Query Frame = 0


Query: 1   MENEVAVESKELLQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT 60
           MENEVA+++KE   NP+EG+ DE    S +LPAPP+WKKLF P+KGGAP+KN+IVF+APT
Sbjct: 1   MENEVALQNKE---NPLEGSKDE---VSFQLPAPPSWKKLFSPKKGGAPRKNDIVFIAPT 60

Query: 61  GEEISTRKQLEQYLKSHPGDVAISDFDWSTGETPRRSARISEKAKATPPQEEPSRKRARR 120
           GEEIS RKQLEQYLKSHPGDVA+SDFDWSTGETPRRS RISEKAKATPPQEEP +KRAR+
Sbjct: 61  GEEISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPKKRARK 120

Query: 121 SPGSKKKEHNEMEK--GAEETDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIE 180
           SPGSKKKE NE EK  G +E++IKDAEMSEK + E EK+ E+ KDEEP  EDET +KE+E
Sbjct: 121 SPGSKKKEQNETEKSEGEKESEIKDAEMSEKDNTEIEKDNENSKDEEPNKEDETTQKELE 180

Query: 181 TAKDEEPKNEDETKEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQNSKEDTCIENVP 240
           TAK EEPKNEDE +EKE ET+KDEE KK D ETK+ E   T + E   N ++    E   
Sbjct: 181 TAKGEEPKNEDEKEEKETETSKDEEPKKVD-ETKDREIETTKDEEA--NKEDVESKETEQ 240

Query: 241 SDKTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVGENVALEVGQEKGENISQTEAEKDI 300
            D T+TKNGQLD EDGK+ EDQS  +V  +EV T GE V LEVGQ+K EN  +TEAEK I
Sbjct: 241 KDATETKNGQLDTEDGKKGEDQSRENVPNQEVVTAGEKVTLEVGQDKEENGPETEAEKPI 300

Query: 301 DSCCMKQDKPDVGNIKEN---------GTGITPASEGAITEHEDAQKHEGKHDVQAKNRG 358
           DSCCMKQ+KP +G  KEN         GT   PASEG ITE+ED QKH+GKH +Q +NRG
Sbjct: 301 DSCCMKQEKPTLGTSKENGVAEQGNCSGTERPPASEGTITENEDTQKHDGKHHMQGENRG 359

[Close]

BLAST of MS009404 vs. NCBI nr
Match: KAA0058753.1 (methyl-CpG-binding domain-containing protein 11 [Cucumis melo var. makuwa] >TYK10547.1 methyl-CpG-binding domain-containing protein 11 [Cucumis melo var. makuwa])

HSP 1 Score: 386.7 bits (992), Expect = 2.1e-103
Identity = 239/368 (64.95%), Postives = 283/368 (76.90%), Query Frame = 0


Query: 1   MENEVAVESKELLQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT 60
           MENEVA+++KE  +NP+EG+ DE    S +LPAPP+WKKLF P+KGGAP+KN+IVF+APT
Sbjct: 1   MENEVALQNKEHPENPLEGSKDE---VSFQLPAPPSWKKLFSPKKGGAPRKNDIVFIAPT 60

Query: 61  GEEISTRKQLEQYLKSHPGDVAISDFDWSTGETPRRSARISEKAKATPPQEEPSRKRARR 120
           GEEIS RKQLEQYLKSHPGD+ +SDFDWSTGETPRRS RISEKAKATPPQEEP +KRAR+
Sbjct: 61  GEEISNRKQLEQYLKSHPGDITLSDFDWSTGETPRRSTRISEKAKATPPQEEPPKKRARK 120

Query: 121 SPGSKKKEHNEMEK--GAEETDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIE 180
           SPGSKKKEHNE EK  G +E  IKDAEMSEK +A  E+E E+ KDEEP  EDETK KE+E
Sbjct: 121 SPGSKKKEHNETEKSDGGKECKIKDAEMSEKDNA--ERENENSKDEEPNKEDETKRKELE 180

Query: 181 TAKDEEPKNEDETKEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQNSKEDTCIENVP 240
           TAK EEPKNEDE  EKE ETAKDEE KK D ETK+ E   + + E   N ++    E   
Sbjct: 181 TAKGEEPKNEDEKTEKETETAKDEEPKKVD-ETKDREIETSKDEEA--NKEDIESKETEQ 240

Query: 241 SDKTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVGENVALEVGQEKGENISQTEAEKDI 300
            + T+TKNGQLD EDGK+ EDQS  +V  +EVAT GE V LEVGQ+K EN  +TEAEK I
Sbjct: 241 KNATETKNGQLDTEDGKKVEDQSRENVPNQEVATAGEKVTLEVGQDK-ENGPETEAEKAI 300

Query: 301 DSCCMKQDKPDVGNIKEN---------GTGITPASEGAITEHEDAQKHEGKHDVQAKNRG 358
           DSCCMKQ+KP++G  KEN         GT   PASEG ITE++D QKH+GKH++Q +NRG
Sbjct: 301 DSCCMKQEKPNLGTTKENGVAEQEKCRGTERPPASEGTITENKDTQKHDGKHEIQGENRG 359

[Close]

BLAST of MS009404 vs. NCBI nr
Match: XP_022960051.1 (methyl-CpG-binding domain-containing protein 11-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 382.9 bits (982), Expect = 3.1e-102
Identity = 241/359 (67.13%), Postives = 275/359 (76.60%), Query Frame = 0


Query: 1   MENEVAVESKELLQNPVE-GAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAP 60
           ME+EV V+SKE LQNPVE GA DE    S  LPAPP+WKKL  P+KGG P+KNE++F+AP
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDE---VSAHLPAPPSWKKLLSPKKGGTPRKNEVIFIAP 60

Query: 61  TGEEISTRKQLEQYLKSHPGDVAISDFDWSTGETPRRSARISEKAKAT-PPQEEPSRKRA 120
           TGEEIS RKQLEQYLKSHP DVA+SDFDWSTGETPRRSARISEKAK T PPQE+P RKRA
Sbjct: 61  TGEEISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRA 120

Query: 121 RRSPGSKKKEHNEMEKGAEETDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIE 180
           R+SPGSKKKE    E G +ETD+KD EMSEK HAE +KE    KD+EPK  DETKEKE E
Sbjct: 121 RKSPGSKKKEAKNSE-GVKETDVKDVEMSEKEHAEIKKE----KDKEPKMVDETKEKETE 180

Query: 181 TAKDEEPKNEDETKEKEIETAKDEEAKKEDE-ETKETEQRNTTEVETFQNSKEDTCIENV 240
            AKDEEP       EK+IETAKDE+AKKEDE + KE E     + E    +K++  IENV
Sbjct: 181 NAKDEEP-------EKDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENV 240

Query: 241 PSDKTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVGENVALEVGQEKGENISQTEAEKD 300
           P + T TKNGQLDAEDGKE EDQSHG+VQ +EVAT  E+VAL  GQ+KGEN  QTEAEK 
Sbjct: 241 PGNTTITKNGQLDAEDGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKA 300

Query: 301 IDSCCMKQDKPDVGNIKENGTGITPASEGAITEHEDAQKHEGKHDVQAKNRGNINENEV 357
            +SCCMKQ+K D  NIKENG   TPASEG ITE++DAQ    KHD+QAK+R N  E+EV
Sbjct: 301 NESCCMKQEKADASNIKENGVAGTPASEGTITENDDAQ----KHDIQAKDRVNKKESEV 340

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BLAST of MS009404 vs. ExPASy Swiss-Prot
Match: Q9LW00 (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.7e-26
Identity = 110/254 (43.31%), Postives = 145/254 (57.09%), Query Frame = 0


Query: 23  EAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPTGEEISTRKQLEQYLKSHPGDVA 82
           E  V SVELPAP +WKKLF P K G+ KK E+VFVAPTGEEIS RKQLEQYLKSHPG+ A
Sbjct: 4   EEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPA 63

Query: 83  ISDFDWSTGETPRRSARISEKAKATP-PQEEPSRKRAR-RSPGSKKKEHNEMEKGA--EE 142
           I++FDW+T  TPRRSARISEK KATP P +EP +KR R +SP SKK    E  +G   E 
Sbjct: 64  IAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEEN 123

Query: 143 TDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIETAKDEEPKNE-------DET 202
           + +KD EM+     E   E E+  D+    E E      E    EE  N        +  
Sbjct: 124 SHVKDTEMNP---PEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESM 183

Query: 203 KEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQNSKEDTCIENVPSDKTKTKNGQLDA 262
           KEK +++  D+  + + E+   + ++N+ +VE       D    +    +   +NG    
Sbjct: 184 KEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTE 243

Query: 263 EDGKE--AEDQSHG 264
            +GKE  AE ++ G
Sbjct: 244 AEGKEKTAEGEATG 254

[Close]

BLAST of MS009404 vs. ExPASy Swiss-Prot
Match: Q9XI36 (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.9e-26
Identity = 130/372 (34.95%), Postives = 195/372 (52.42%), Query Frame = 0


Query: 26  VASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPTGEEISTRKQLEQYLKSHPGDVAISD 85
           + S+ELPAP +WKKLF P++ G P+K EIVFVAPTGEEIS+RKQLEQYLK+HPG+  IS+
Sbjct: 7   LVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISE 66

Query: 86  FDWSTGETPRRSARISEKAKAT--PPQEEPSRKRARRSPGSKK-----KEHNEMEKGAEE 145
           F+W+TGETPRRS+RIS+K KAT   P +EP  K+ RRS  +KK      E NE     E 
Sbjct: 67  FEWTTGETPRRSSRISQKVKATTPTPDKEPLLKK-RRSSLTKKDNKEAAEKNEEAAVKEN 126

Query: 146 TDIKDAEMSEKVHAETEKEKEDFKD----EEPKNEDETKEKEIETAKDEEPKNEDETKEK 205
            D+     +E   AE EKEKE   +    E+  NE E  E E    + E+ +   E + +
Sbjct: 127 MDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQTE 186

Query: 206 EIETAKDEEAKKEDEETKETE----QRNTTEVETF---------QNSKEDTCIENVPSDK 265
             E  K++E +K + E KE E    ++ + EV+T          + ++E + +E +   +
Sbjct: 187 IAEAEKEKEGEKAEAENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEEPSKVEGLKDTE 246

Query: 266 TKTKNGQLDAED--GKEAEDQSHGHVQIREVATVGENVAL--------------EVGQEK 325
            K     +   D   K AE+++     +   A   +NV L              +  +E 
Sbjct: 247 MKEAQEVVTEADVEKKPAEEKTENKGSVTTEANGEQNVTLGEPNLDADAEADKGKESKEY 306

Query: 326 GENISQTEAEKDIDSCCMKQDKPDVGNIKENGTGITPASEGAITEHEDAQKHEGKHDVQA 357
            E  ++ EA K+ D+    + K +    KEN T      E  + + E A   E  +D++A
Sbjct: 307 DEKTTEAEANKENDTQESDEKKTEAAANKENET-----QESDVKKTEAAVAEEKSNDMKA 366

[Close]

BLAST of MS009404 vs. ExPASy TrEMBL
Match: A0A6J1DJ04 (methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111020477 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.5e-166
Identity = 332/357 (93.00%), Postives = 333/357 (93.28%), Query Frame = 0


Query: 1   MENEVAVESKELLQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT 60
           MENEVAVESKE LQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT
Sbjct: 1   MENEVAVESKEPLQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT 60

Query: 61  GEEISTRKQLEQYLKSHPGDVAISDFDWSTGETPRRSARISEKAKATPPQEEPSRKRARR 120
           GEEISTRKQLEQYLKSHPG VAISDFDWSTGETPRRSARISEKAKA PPQEEPSRKRARR
Sbjct: 61  GEEISTRKQLEQYLKSHPGHVAISDFDWSTGETPRRSARISEKAKAXPPQEEPSRKRARR 120

Query: 121 SPGSKKKEHNEMEKGAEETDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIETA 180
           SPGSKKKEHNEMEKGAEETDIKDAEMSEKVHAETEKEKED                   +
Sbjct: 121 SPGSKKKEHNEMEKGAEETDIKDAEMSEKVHAETEKEKED-------------------S 180

Query: 181 KDEEPKNEDETKEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQNSKEDTCIENVPSD 240
           KDEEPKNEDETKEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQN KEDTCIENVPSD
Sbjct: 181 KDEEPKNEDETKEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQNRKEDTCIENVPSD 240

Query: 241 KTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVGENVALEVGQEKGENISQTEAEKDIDS 300
           KTKTKNGQLDAEDGKEAEDQSHGHVQIREVATV ENVALEVGQEKGENISQTEAEKDIDS
Sbjct: 241 KTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVCENVALEVGQEKGENISQTEAEKDIDS 300

Query: 301 CCMKQDKPDVGNIKENGTGITPASEGAITEHEDAQKHEGKHDVQAKNRGNINENEVT 358
           CCMKQDKPDVGNIKENGTGITPASEGAITEHEDAQKHEGKHDVQAKNRGNINENEVT
Sbjct: 301 CCMKQDKPDVGNIKENGTGITPASEGAITEHEDAQKHEGKHDVQAKNRGNINENEVT 338

[Close]

BLAST of MS009404 vs. ExPASy TrEMBL
Match: A0A0A0KA58 (MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432540 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 2.5e-105
Identity = 241/368 (65.49%), Postives = 282/368 (76.63%), Query Frame = 0


Query: 1   MENEVAVESKELLQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT 60
           MENEVA+++KE   NP+EG+ DE    S +LPAPP+WKKLF P+KGGAP+KN+IVF+APT
Sbjct: 1   MENEVALQNKE---NPLEGSKDE---VSFQLPAPPSWKKLFSPKKGGAPRKNDIVFIAPT 60

Query: 61  GEEISTRKQLEQYLKSHPGDVAISDFDWSTGETPRRSARISEKAKATPPQEEPSRKRARR 120
           GEEIS RKQLEQYLKSHPGDVA+SDFDWSTGETPRRS RISEKAKATPPQEEP +KRAR+
Sbjct: 61  GEEISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPKKRARK 120

Query: 121 SPGSKKKEHNEMEK--GAEETDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIE 180
           SPGSKKKE NE EK  G +E++IKDAEMSEK + E EK+ E+ KDEEP  EDET +KE+E
Sbjct: 121 SPGSKKKEQNETEKSEGEKESEIKDAEMSEKDNTEIEKDNENSKDEEPNKEDETTQKELE 180

Query: 181 TAKDEEPKNEDETKEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQNSKEDTCIENVP 240
           TAK EEPKNEDE +EKE ET+KDEE KK D ETK+ E   T + E   N ++    E   
Sbjct: 181 TAKGEEPKNEDEKEEKETETSKDEEPKKVD-ETKDREIETTKDEEA--NKEDVESKETEQ 240

Query: 241 SDKTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVGENVALEVGQEKGENISQTEAEKDI 300
            D T+TKNGQLD EDGK+ EDQS  +V  +EV T GE V LEVGQ+K EN  +TEAEK I
Sbjct: 241 KDATETKNGQLDTEDGKKGEDQSRENVPNQEVVTAGEKVTLEVGQDKEENGPETEAEKPI 300

Query: 301 DSCCMKQDKPDVGNIKEN---------GTGITPASEGAITEHEDAQKHEGKHDVQAKNRG 358
           DSCCMKQ+KP +G  KEN         GT   PASEG ITE+ED QKH+GKH +Q +NRG
Sbjct: 301 DSCCMKQEKPTLGTSKENGVAEQGNCSGTERPPASEGTITENEDTQKHDGKHHMQGENRG 359

[Close]

BLAST of MS009404 vs. ExPASy TrEMBL
Match: A0A5A7US65 (Methyl-CpG-binding domain-containing protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002000 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.0e-103
Identity = 239/368 (64.95%), Postives = 283/368 (76.90%), Query Frame = 0


Query: 1   MENEVAVESKELLQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT 60
           MENEVA+++KE  +NP+EG+ DE    S +LPAPP+WKKLF P+KGGAP+KN+IVF+APT
Sbjct: 1   MENEVALQNKEHPENPLEGSKDE---VSFQLPAPPSWKKLFSPKKGGAPRKNDIVFIAPT 60

Query: 61  GEEISTRKQLEQYLKSHPGDVAISDFDWSTGETPRRSARISEKAKATPPQEEPSRKRARR 120
           GEEIS RKQLEQYLKSHPGD+ +SDFDWSTGETPRRS RISEKAKATPPQEEP +KRAR+
Sbjct: 61  GEEISNRKQLEQYLKSHPGDITLSDFDWSTGETPRRSTRISEKAKATPPQEEPPKKRARK 120

Query: 121 SPGSKKKEHNEMEK--GAEETDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIE 180
           SPGSKKKEHNE EK  G +E  IKDAEMSEK +A  E+E E+ KDEEP  EDETK KE+E
Sbjct: 121 SPGSKKKEHNETEKSDGGKECKIKDAEMSEKDNA--ERENENSKDEEPNKEDETKRKELE 180

Query: 181 TAKDEEPKNEDETKEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQNSKEDTCIENVP 240
           TAK EEPKNEDE  EKE ETAKDEE KK D ETK+ E   + + E   N ++    E   
Sbjct: 181 TAKGEEPKNEDEKTEKETETAKDEEPKKVD-ETKDREIETSKDEEA--NKEDIESKETEQ 240

Query: 241 SDKTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVGENVALEVGQEKGENISQTEAEKDI 300
            + T+TKNGQLD EDGK+ EDQS  +V  +EVAT GE V LEVGQ+K EN  +TEAEK I
Sbjct: 241 KNATETKNGQLDTEDGKKVEDQSRENVPNQEVATAGEKVTLEVGQDK-ENGPETEAEKAI 300

Query: 301 DSCCMKQDKPDVGNIKEN---------GTGITPASEGAITEHEDAQKHEGKHDVQAKNRG 358
           DSCCMKQ+KP++G  KEN         GT   PASEG ITE++D QKH+GKH++Q +NRG
Sbjct: 301 DSCCMKQEKPNLGTTKENGVAEQEKCRGTERPPASEGTITENKDTQKHDGKHEIQGENRG 359

[Close]

BLAST of MS009404 vs. ExPASy TrEMBL
Match: A0A6J1H7R0 (methyl-CpG-binding domain-containing protein 11-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111460918 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 1.5e-102
Identity = 241/359 (67.13%), Postives = 275/359 (76.60%), Query Frame = 0


Query: 1   MENEVAVESKELLQNPVE-GAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAP 60
           ME+EV V+SKE LQNPVE GA DE    S  LPAPP+WKKL  P+KGG P+KNE++F+AP
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDE---VSAHLPAPPSWKKLLSPKKGGTPRKNEVIFIAP 60

Query: 61  TGEEISTRKQLEQYLKSHPGDVAISDFDWSTGETPRRSARISEKAKAT-PPQEEPSRKRA 120
           TGEEIS RKQLEQYLKSHP DVA+SDFDWSTGETPRRSARISEKAK T PPQE+P RKRA
Sbjct: 61  TGEEISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRA 120

Query: 121 RRSPGSKKKEHNEMEKGAEETDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIE 180
           R+SPGSKKKE    E G +ETD+KD EMSEK HAE +KE    KD+EPK  DETKEKE E
Sbjct: 121 RKSPGSKKKEAKNSE-GVKETDVKDVEMSEKEHAEIKKE----KDKEPKMVDETKEKETE 180

Query: 181 TAKDEEPKNEDETKEKEIETAKDEEAKKEDE-ETKETEQRNTTEVETFQNSKEDTCIENV 240
            AKDEEP       EK+IETAKDE+AKKEDE + KE E     + E    +K++  IENV
Sbjct: 181 NAKDEEP-------EKDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENV 240

Query: 241 PSDKTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVGENVALEVGQEKGENISQTEAEKD 300
           P + T TKNGQLDAEDGKE EDQSHG+VQ +EVAT  E+VAL  GQ+KGEN  QTEAEK 
Sbjct: 241 PGNTTITKNGQLDAEDGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKA 300

Query: 301 IDSCCMKQDKPDVGNIKENGTGITPASEGAITEHEDAQKHEGKHDVQAKNRGNINENEV 357
            +SCCMKQ+K D  NIKENG   TPASEG ITE++DAQ    KHD+QAK+R N  E+EV
Sbjct: 301 NESCCMKQEKADASNIKENGVAGTPASEGTITENDDAQ----KHDIQAKDRVNKKESEV 340

[Close]

BLAST of MS009404 vs. ExPASy TrEMBL
Match: A0A6J1H804 (methyl-CpG-binding domain-containing protein 11-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460918 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 1.5e-102
Identity = 241/359 (67.13%), Postives = 275/359 (76.60%), Query Frame = 0


Query: 1   MENEVAVESKELLQNPVE-GAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAP 60
           ME+EV V+SKE LQNPVE GA DE    S  LPAPP+WKKL  P+KGG P+KNE++F+AP
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDE---VSAHLPAPPSWKKLLSPKKGGTPRKNEVIFIAP 60

Query: 61  TGEEISTRKQLEQYLKSHPGDVAISDFDWSTGETPRRSARISEKAKAT-PPQEEPSRKRA 120
           TGEEIS RKQLEQYLKSHP DVA+SDFDWSTGETPRRSARISEKAK T PPQE+P RKRA
Sbjct: 61  TGEEISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRA 120

Query: 121 RRSPGSKKKEHNEMEKGAEETDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIE 180
           R+SPGSKKKE    E G +ETD+KD EMSEK HAE +KE    KD+EPK  DETKEKE E
Sbjct: 121 RKSPGSKKKEAKNSE-GVKETDVKDVEMSEKEHAEIKKE----KDKEPKMVDETKEKETE 180

Query: 181 TAKDEEPKNEDETKEKEIETAKDEEAKKEDE-ETKETEQRNTTEVETFQNSKEDTCIENV 240
            AKDEEP       EK+IETAKDE+AKKEDE + KE E     + E    +K++  IENV
Sbjct: 181 NAKDEEP-------EKDIETAKDEQAKKEDETKDKEIETAKDEQAENVVETKDEPGIENV 240

Query: 241 PSDKTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVGENVALEVGQEKGENISQTEAEKD 300
           P + T TKNGQLDAEDGKE EDQSHG+VQ +EVAT  E+VAL  GQ+KGEN  QTEAEK 
Sbjct: 241 PGNTTITKNGQLDAEDGKEVEDQSHGNVQNQEVATAVESVALVGGQDKGENRPQTEAEKA 300

Query: 301 IDSCCMKQDKPDVGNIKENGTGITPASEGAITEHEDAQKHEGKHDVQAKNRGNINENEV 357
            +SCCMKQ+K D  NIKENG   TPASEG ITE++DAQ    KHD+QAK+R N  E+EV
Sbjct: 301 NESCCMKQEKADASNIKENGVAGTPASEGTITENDDAQ----KHDIQAKDRVNKKESEV 340

[Close]

BLAST of MS009404 vs. TAIR 10
Match: AT3G15790.1 (methyl-CPG-binding domain 11 )

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-27
Identity = 110/254 (43.31%), Postives = 145/254 (57.09%), Query Frame = 0


Query: 23  EAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPTGEEISTRKQLEQYLKSHPGDVA 82
           E  V SVELPAP +WKKLF P K G+ KK E+VFVAPTGEEIS RKQLEQYLKSHPG+ A
Sbjct: 4   EEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPA 63

Query: 83  ISDFDWSTGETPRRSARISEKAKATP-PQEEPSRKRAR-RSPGSKKKEHNEMEKGA--EE 142
           I++FDW+T  TPRRSARISEK KATP P +EP +KR R +SP SKK    E  +G   E 
Sbjct: 64  IAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEEN 123

Query: 143 TDIKDAEMSEKVHAETEKEKEDFKDEEPKNEDETKEKEIETAKDEEPKNE-------DET 202
           + +KD EM+     E   E E+  D+    E E      E    EE  N        +  
Sbjct: 124 SHVKDTEMNP---PEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESM 183

Query: 203 KEKEIETAKDEEAKKEDEETKETEQRNTTEVETFQNSKEDTCIENVPSDKTKTKNGQLDA 262
           KEK +++  D+  + + E+   + ++N+ +VE       D    +    +   +NG    
Sbjct: 184 KEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTE 243

Query: 263 EDGKE--AEDQSHG 264
            +GKE  AE ++ G
Sbjct: 244 AEGKEKTAEGEATG 254

[Close]

BLAST of MS009404 vs. TAIR 10
Match: AT1G15340.1 (methyl-CPG-binding domain 10 )

HSP 1 Score: 120.2 bits (300), Expect = 3.5e-27
Identity = 130/372 (34.95%), Postives = 195/372 (52.42%), Query Frame = 0


Query: 26  VASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPTGEEISTRKQLEQYLKSHPGDVAISD 85
           + S+ELPAP +WKKLF P++ G P+K EIVFVAPTGEEIS+RKQLEQYLK+HPG+  IS+
Sbjct: 7   LVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPGNPVISE 66

Query: 86  FDWSTGETPRRSARISEKAKAT--PPQEEPSRKRARRSPGSKK-----KEHNEMEKGAEE 145
           F+W+TGETPRRS+RIS+K KAT   P +EP  K+ RRS  +KK      E NE     E 
Sbjct: 67  FEWTTGETPRRSSRISQKVKATTPTPDKEPLLKK-RRSSLTKKDNKEAAEKNEEAAVKEN 126

Query: 146 TDIKDAEMSEKVHAETEKEKEDFKD----EEPKNEDETKEKEIETAKDEEPKNEDETKEK 205
            D+     +E   AE EKEKE   +    E+  NE E  E E    + E+ +   E + +
Sbjct: 127 MDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEGEKTEAGKEGQTE 186

Query: 206 EIETAKDEEAKKEDEETKETE----QRNTTEVETF---------QNSKEDTCIENVPSDK 265
             E  K++E +K + E KE E    ++ + EV+T          + ++E + +E +   +
Sbjct: 187 IAEAEKEKEGEKAEAENKEAEVVRDKKESMEVDTSELEKKAGSGEGAEEPSKVEGLKDTE 246

Query: 266 TKTKNGQLDAED--GKEAEDQSHGHVQIREVATVGENVAL--------------EVGQEK 325
            K     +   D   K AE+++     +   A   +NV L              +  +E 
Sbjct: 247 MKEAQEVVTEADVEKKPAEEKTENKGSVTTEANGEQNVTLGEPNLDADAEADKGKESKEY 306

Query: 326 GENISQTEAEKDIDSCCMKQDKPDVGNIKENGTGITPASEGAITEHEDAQKHEGKHDVQA 357
            E  ++ EA K+ D+    + K +    KEN T      E  + + E A   E  +D++A
Sbjct: 307 DEKTTEAEANKENDTQESDEKKTEAAANKENET-----QESDVKKTEAAVAEEKSNDMKA 366

[Close]

BLAST of MS009404 vs. TAIR 10
Match: AT1G15340.2 (methyl-CPG-binding domain 10 )

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-11
Identity = 104/340 (30.59%), Postives = 162/340 (47.65%), Query Frame = 0


Query: 26  VASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPTGEEISTRKQLEQYLKSHPGDVAISD 85
           + S+ELPAP +WKKLF P++ G P+K EIVFVAPTGEEIS+RKQLEQYLK +  + A  +
Sbjct: 7   LVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKDNK-EAAEKN 66

Query: 86  FDWSTGETPRRSARISEKAKATPPQ-EEPSRKRARRSPGSKKKEHNEMEKGAEETDIKDA 145
            + +  E    +  + +  K    + E+   K         +KE+NE EK   E   K+ 
Sbjct: 67  EEAAVKE----NMDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKEG 126

Query: 146 EMSEKVH------AETEKEKEDFKDEEPKNEDETKEKEIETAKDEEPKNEDETKEKEIET 205
           E +E         AE EKEKE  K        E + KE E  +D++   E +T E E + 
Sbjct: 127 EKTEAGKEGQTEIAEAEKEKEGEK-------AEAENKEAEVVRDKKESMEVDTSELEKKA 186

Query: 206 AKDEEAKKEDEETKETEQRNTTEVETFQNSKEDTCIENVPS-DKTKTKNGQLDAEDGKEA 265
              E A    EE  + E    TE++  Q    +  +E  P+ +KT+ K       +G++ 
Sbjct: 187 GSGEGA----EEPSKVEGLKDTEMKEAQEVVTEADVEKKPAEEKTENKGSVTTEANGEQN 246

Query: 266 EDQSHGHVQIREVATVGENVALEVGQEKGENISQTEAEKDIDSCCMKQDKPDVGNIKENG 325
                 ++     A  G+       +E  E  ++ EA K+ D+    + K +    KEN 
Sbjct: 247 VTLGEPNLDADAEADKGKE-----SKEYDEKTTEAEANKENDTQESDEKKTEAAANKENE 306

Query: 326 TGITPASEGAITEHEDAQKHEGKHDVQAKNRG-NINENEV 357
           T      E  + + E A   E  +D++A++   ++  N+V
Sbjct: 307 T-----QESDVKKTEAAVAEEKSNDMKAEDTNRSLEANQV 320

The following BLAST results are available for this feature:

BLAST of MS009404 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152856.1	5.1e-166	93.00	methyl-CpG-binding domain-containing protein 11-like [Momordica charantia]	[more]
XP_038897995.1	1.1e-120	69.39	methyl-CpG-binding domain-containing protein 11-like [Benincasa hispida]	[more]
XP_004135849.1	5.1e-105	65.49	methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KGN45272.1 hy...	[more]
KAA0058753.1	2.1e-103	64.95	methyl-CpG-binding domain-containing protein 11 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_022960051.1	3.1e-102	67.13	methyl-CpG-binding domain-containing protein 11-like isoform X2 [Cucurbita mosch...	[more]

BLAST of MS009404 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW00	1.7e-26	43.31	Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9XI36	4.9e-26	34.95	Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MS009404 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJ04	2.5e-166	93.00	methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3...	[more]
A0A0A0KA58	2.5e-105	65.49	MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432540 PE=4 SV...	[more]
A0A5A7US65	1.0e-103	64.95	Methyl-CpG-binding domain-containing protein 11 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1H7R0	1.5e-102	67.13	methyl-CpG-binding domain-containing protein 11-like isoform X4 OS=Cucurbita mos...	[more]
A0A6J1H804	1.5e-102	67.13	methyl-CpG-binding domain-containing protein 11-like isoform X1 OS=Cucurbita mos...	[more]

BLAST of MS009404 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15790.1	1.2e-27	43.31	methyl-CPG-binding domain 11	[more]
AT1G15340.1	3.5e-27	34.95	methyl-CPG-binding domain 10	[more]
AT1G15340.2	1.6e-11	30.59	methyl-CPG-binding domain 10	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 189..212
None	No IPR available	COILS	Coil	Coil	coord: 144..164
None	No IPR available	GENE3D	3.30.890.10		coord: 28..98 e-value: 7.8E-10 score: 40.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 281..357
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..263
None	No IPR available	PANTHER	PTHR33729:SF6	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE	coord: 24..356
IPR001739	Methyl-CpG DNA binding	SMART	SM00391	TAM_2	coord: 26..100 e-value: 0.0074 score: 13.8
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 29..93 e-value: 5.2E-12 score: 45.3
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 23..93 score: 13.854188
IPR039622	Methyl-CpG-binding domain-containing protein 10/11	PANTHER	PTHR33729	METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 24..356
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 22..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS009404.1	MS009404.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding