MS008107 (gene) Bitter gourd (TR) v1

Overview


Name	MS008107
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Hybrid signal transduction protein dokA isoform X2
Location	scaffold703: 272230 .. 273955 (+)
RNA-Seq Expression	MS008107
Synteny	MS008107

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGAATCGGATCCAGATTGGGCCGCGCCTCCTCCCGCTACGGTCCGGCCGCCACCGTCTTCAACGGCCCCGTTCGGAAGTGGAAGAAGAAGTGGGTCTTAGCTTCTTCTTCTTCCTCCGGCCTCTCCTACCAGCCCTCCTCTCACTCCCAATCCAACGCCCACAAGCTTCTTCTCTGCCGCTGGACGCCGATTCCTCCGCCTCCTTCCACGGAAACCGATGGACCCACCGCGCCGCCCGACGAGCCGCCCAGACGCAAGTTCCGTTACACTCCTGTAAGTTTAGAACGGTACCCAAATCAATTTATGCTCTCTGTGATTGTTGCATGTGAATTGATTTTGACCTAGGGAGTGTTGCGGACTTAATTGGGGGGTTTTTCGATTTTTGGTAGTGGTTATACACCAGTGATTTTGATTTCTAGTTACTGATTTTAGCATGCGCTGCCTTCTGGGAACAATTGATTCATCTCCTATTCTGTTCTTCTAGATTGGGATTTAACTACGGGGCAGACAATTTGGTTGTTTCGGTTGTGTTGTGCAGATTGCTGTGCTGGAGGAACAGAAGAATGCAGAATTGAGAAGTGTTAAGGATGAAGTTAGAATGAAAGAAATCGACCAGGCGGCGGTGTTCACCGCAACTGTGAGCAATGAGACTCATGGAGAGCTGAATGTCAATGAGGTTTTCAAGGAAGAAACTCAGGTGTCAATGTCAACTTGGCTCTTGTTTATTGTTTTCTTGTGAAGTTTCTTTGCTTTTGTTCATGCTTTCTCTCCATGGTTACCTTCTTAGTATTTCTAATTGTGTTGAGTTTTGGGCTGAATTGAATTTTACCGGATTCGAAAGAGCAATATACAGATATCTAGATCTTTTCATCATTTTACTTTTCCTTACATCATGTATGAGAAGATACATATAACAATAACATGGTATTAGGGTTCTTTCTAATGTCCATTTAGATAGTTTCTTTCTCAATGAAAGTTGGTTAATTGAGATAGTTACATCTTCATGTTGTTTATCAATAGTCAAACAAGAAAATGAAAACTTACCTCATTTTTAGTGGCTCAATCATGAGTACTCCTAAGCATGCTTGACTTGGAGCAATAGGTTAGGTGACATCTTGGGGGATTTTTCTAGGAAGCATGTGTGTGAGGATAAAGTGTGTTGAAAGGACCCATGTTGGCTTGTAGGGACCGTTTTCACTCTTGCAAGCAACTCAAGTAAAGCATCTGGTGCAGCTTGTAGGGAATGTAGAGGAATACTGGGGCACCATGTGTCAAATCTGGATTCAAAATCCTTGTCTGAATCCTGGGTTTGGGGTGTTACAAAAAATACTTGGAAAGATTACAGGAGAGACGAATTTCTCTGTATCTTGCTGGTTTCAGGGAATCCTGAGCATTGAGCACTTGGTTGAGTTGAAGCCCTGTTTTGACCACTACGACAGACTCTTGGGACAAGATGTTGATTTTTATTCATATACTCAGTGAACTGGGACATAGTTTAGCAGATTAACATCATTACACTTATGGAAAAGTTTTCTAGTTCAGTACAAAATGGTAGAATCATCTCATTCTCAAGAACTTGATGAACCCCGAAACCATATTTTCTTTGCAGGAAACGAGCAAGATTCTGAACAGCCCACGCAATGCAAACAAGAACCGTTTAGATTTGGCATTGTGCTTGAATGGTGGGAACCAGAACCAAGAATCTGCTGGTAAGAGCTCT

mRNA sequence

ATGGAGGGAATCGGATCCAGATTGGGCCGCGCCTCCTCCCGCTACGGTCCGGCCGCCACCGTCTTCAACGGCCCCGTTCGGAAGTGGAAGAAGAAGTGGGTCTTAGCTTCTTCTTCTTCCTCCGGCCTCTCCTACCAGCCCTCCTCTCACTCCCAATCCAACGCCCACAAGCTTCTTCTCTGCCGCTGGACGCCGATTCCTCCGCCTCCTTCCACGGAAACCGATGGACCCACCGCGCCGCCCGACGAGCCGCCCAGACGCAAGTTCCGTTACACTCCTATTGCTGTGCTGGAGGAACAGAAGAATGCAGAATTGAGAAGTGTTAAGGATGAAGTTAGAATGAAAGAAATCGACCAGGCGGCGGTGTTCACCGCAACTGTGAGCAATGAGACTCATGGAGAGCTGAATGTCAATGAGGTTTTCAAGGAAGAAACTCAGGAAACGAGCAAGATTCTGAACAGCCCACGCAATGCAAACAAGAACCGTTTAGATTTGGCATTGTGCTTGAATGGTGGGAACCAGAACCAAGAATCTGCTGGTAAGAGCTCT

Coding sequence (CDS)

ATGGAGGGAATCGGATCCAGATTGGGCCGCGCCTCCTCCCGCTACGGTCCGGCCGCCACCGTCTTCAACGGCCCCGTTCGGAAGTGGAAGAAGAAGTGGGTCTTAGCTTCTTCTTCTTCCTCCGGCCTCTCCTACCAGCCCTCCTCTCACTCCCAATCCAACGCCCACAAGCTTCTTCTCTGCCGCTGGACGCCGATTCCTCCGCCTCCTTCCACGGAAACCGATGGACCCACCGCGCCGCCCGACGAGCCGCCCAGACGCAAGTTCCGTTACACTCCTATTGCTGTGCTGGAGGAACAGAAGAATGCAGAATTGAGAAGTGTTAAGGATGAAGTTAGAATGAAAGAAATCGACCAGGCGGCGGTGTTCACCGCAACTGTGAGCAATGAGACTCATGGAGAGCTGAATGTCAATGAGGTTTTCAAGGAAGAAACTCAGGAAACGAGCAAGATTCTGAACAGCCCACGCAATGCAAACAAGAACCGTTTAGATTTGGCATTGTGCTTGAATGGTGGGAACCAGAACCAAGAATCTGCTGGTAAGAGCTCT

Protein sequence

MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLLCRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQAAVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAGKSS

Homology

[Close]

BLAST of MS008107 vs. NCBI nr
Match: XP_022139775.1 (uncharacterized protein LOC111010600 [Momordica charantia])

HSP 1 Score: 357.8 bits (917), Expect = 5.4e-95
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL 60

Query: 61  CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA 120
           CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA
Sbjct: 61  CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA 120

Query: 121 AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG 180
           AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG
Sbjct: 121 AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG 180

Query: 181 KSS 184
           KSS
Sbjct: 181 KSS 183

[Close]

BLAST of MS008107 vs. NCBI nr
Match: XP_038898202.1 (uncharacterized protein LOC120085942 [Benincasa hispida])

HSP 1 Score: 297.0 bits (759), Expect = 1.1e-76
Identity = 154/183 (84.15%), Postives = 164/183 (89.62%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGL+Y PSS SQSNA KLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLTYHPSSQSQSNAQKLLL 60

Query: 61  CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA 120
           CRWTPI PP S+E DG TAPPDEPP+RKFRYTPIAVLEEQKNAELRS+KDEVR+KE+DQ 
Sbjct: 61  CRWTPIHPPTSSEADGTTAPPDEPPKRKFRYTPIAVLEEQKNAELRSIKDEVRVKEMDQL 120

Query: 121 AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG 180
           A  TATV NE  GELNVNEVFKEETQETSKILNSP + ++N LDLALCLNG  Q Q+SAG
Sbjct: 121 AAKTATVGNEAQGELNVNEVFKEETQETSKILNSPSDGSRNNLDLALCLNGRKQIQDSAG 180

Query: 181 KSS 184
           KSS
Sbjct: 181 KSS 183

[Close]

BLAST of MS008107 vs. NCBI nr
Match: XP_022936275.1 (uncharacterized protein LOC111442943 [Cucurbita moschata])

HSP 1 Score: 291.2 bits (744), Expect = 6.2e-75
Identity = 152/183 (83.06%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG++YQ SS SQSNA KLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAQKLLL 60

Query: 61  CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA 120
           CRWTPI P  S+E DG  APP+EPPRRKFRYTPIAVLEEQKNA LRSVKDEVR+KE+DQ+
Sbjct: 61  CRWTPIHPSTSSEADGAAAPPEEPPRRKFRYTPIAVLEEQKNAGLRSVKDEVRVKEMDQS 120

Query: 121 AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG 180
           A  TATV NE  GELNVNEVFKEETQETSKILNSPR+ N+N LDLALCLNG N  Q+SAG
Sbjct: 121 ASKTATVGNEAQGELNVNEVFKEETQETSKILNSPRDGNRNNLDLALCLNGQNPKQDSAG 180

Query: 181 KSS 184
           KSS
Sbjct: 181 KSS 183

[Close]

BLAST of MS008107 vs. NCBI nr
Match: XP_004151087.1 (uncharacterized protein LOC101212909 [Cucumis sativus] >KGN44051.1 hypothetical protein Csa_015436 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 1.8e-74
Identity = 151/182 (82.97%), Postives = 162/182 (89.01%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL 60
           MEGIGSRLGR SSRYGPAATVFNGPVRKWKKKWVLASSSSSGL+YQ SSHSQSNA KLLL
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLL 60

Query: 61  CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA 120
           CRWTPI PP S+E D  TAPPDEPP+RKFRYTPIAVLEEQK+AELRSVKDEVRMKE+DQ 
Sbjct: 61  CRWTPIHPPTSSEADEATAPPDEPPKRKFRYTPIAVLEEQKSAELRSVKDEVRMKEMDQL 120

Query: 121 AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG 180
           A  TATV NE  GELNVNE+FKEETQETSK LNSPR+ ++N LDLALCLNG  + Q+SAG
Sbjct: 121 AAKTATVGNEALGELNVNEIFKEETQETSKNLNSPRDGSRNNLDLALCLNGQKKVQDSAG 180

Query: 181 KS 183
           KS
Sbjct: 181 KS 182

[Close]

BLAST of MS008107 vs. NCBI nr
Match: XP_022976368.1 (uncharacterized protein LOC111476793 [Cucurbita maxima])

HSP 1 Score: 289.3 bits (739), Expect = 2.4e-74
Identity = 151/183 (82.51%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG++YQ SS SQSNAHKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAHKLLL 60

Query: 61  CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA 120
           CRWTPI P  S+E DG  APP+EPPRRKFRYTPIAVLEEQKNA LRSVKDEVR+KE DQ+
Sbjct: 61  CRWTPIHPSTSSEADGAAAPPEEPPRRKFRYTPIAVLEEQKNAGLRSVKDEVRVKETDQS 120

Query: 121 AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG 180
           A   ATV NE  GELNVNEVFKEETQETSKILNSPR+ ++N LDLALCLNG N  Q+SAG
Sbjct: 121 ASKMATVGNEAQGELNVNEVFKEETQETSKILNSPRDGDRNNLDLALCLNGQNPKQDSAG 180

Query: 181 KSS 184
           KSS
Sbjct: 181 KSS 183

[Close]

BLAST of MS008107 vs. ExPASy TrEMBL
Match: A0A6J1CD90 (uncharacterized protein LOC111010600 OS=Momordica charantia OX=3673 GN=LOC111010600 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.6e-95
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL 60

Query: 61  CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA 120
           CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA
Sbjct: 61  CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA 120

Query: 121 AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG 180
           AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG
Sbjct: 121 AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG 180

Query: 181 KSS 184
           KSS
Sbjct: 181 KSS 183

[Close]

BLAST of MS008107 vs. ExPASy TrEMBL
Match: A0A6J1FD66 (uncharacterized protein LOC111442943 OS=Cucurbita moschata OX=3662 GN=LOC111442943 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.0e-75
Identity = 152/183 (83.06%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG++YQ SS SQSNA KLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAQKLLL 60

Query: 61  CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA 120
           CRWTPI P  S+E DG  APP+EPPRRKFRYTPIAVLEEQKNA LRSVKDEVR+KE+DQ+
Sbjct: 61  CRWTPIHPSTSSEADGAAAPPEEPPRRKFRYTPIAVLEEQKNAGLRSVKDEVRVKEMDQS 120

Query: 121 AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG 180
           A  TATV NE  GELNVNEVFKEETQETSKILNSPR+ N+N LDLALCLNG N  Q+SAG
Sbjct: 121 ASKTATVGNEAQGELNVNEVFKEETQETSKILNSPRDGNRNNLDLALCLNGQNPKQDSAG 180

Query: 181 KSS 184
           KSS
Sbjct: 181 KSS 183

[Close]

BLAST of MS008107 vs. ExPASy TrEMBL
Match: A0A0A0K8E5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145940 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.8e-75
Identity = 151/182 (82.97%), Postives = 162/182 (89.01%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL 60
           MEGIGSRLGR SSRYGPAATVFNGPVRKWKKKWVLASSSSSGL+YQ SSHSQSNA KLLL
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLL 60

Query: 61  CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA 120
           CRWTPI PP S+E D  TAPPDEPP+RKFRYTPIAVLEEQK+AELRSVKDEVRMKE+DQ 
Sbjct: 61  CRWTPIHPPTSSEADEATAPPDEPPKRKFRYTPIAVLEEQKSAELRSVKDEVRMKEMDQL 120

Query: 121 AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG 180
           A  TATV NE  GELNVNE+FKEETQETSK LNSPR+ ++N LDLALCLNG  + Q+SAG
Sbjct: 121 AAKTATVGNEALGELNVNEIFKEETQETSKNLNSPRDGSRNNLDLALCLNGQKKVQDSAG 180

Query: 181 KS 183
           KS
Sbjct: 181 KS 182

[Close]

BLAST of MS008107 vs. ExPASy TrEMBL
Match: A0A6J1ILX5 (uncharacterized protein LOC111476793 OS=Cucurbita maxima OX=3661 GN=LOC111476793 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 151/183 (82.51%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL 60
           MEGIGSRLGRASSRYGPAATVFNGPVR+WKKKWVLASSSSSG++YQ SS SQSNAHKLLL
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAHKLLL 60

Query: 61  CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA 120
           CRWTPI P  S+E DG  APP+EPPRRKFRYTPIAVLEEQKNA LRSVKDEVR+KE DQ+
Sbjct: 61  CRWTPIHPSTSSEADGAAAPPEEPPRRKFRYTPIAVLEEQKNAGLRSVKDEVRVKETDQS 120

Query: 121 AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG 180
           A   ATV NE  GELNVNEVFKEETQETSKILNSPR+ ++N LDLALCLNG N  Q+SAG
Sbjct: 121 ASKMATVGNEAQGELNVNEVFKEETQETSKILNSPRDGDRNNLDLALCLNGQNPKQDSAG 180

Query: 181 KSS 184
           KSS
Sbjct: 181 KSS 183

[Close]

BLAST of MS008107 vs. ExPASy TrEMBL
Match: A0A6J1FHM4 (uncharacterized protein LOC111445863 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445863 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.8e-73
Identity = 148/183 (80.87%), Postives = 161/183 (87.98%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNAHKLLL 60
           MEGIGSRLGR SSRYGPAATVFNGPVRKWKKKWVLASSSSSG++ Q SSHSQSNA KLLL
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGVANQSSSHSQSNAQKLLL 60

Query: 61  CRWTPIPPPPSTETDGPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDEVRMKEIDQA 120
           CRWTPIPPP S+E DG  APPDEPPRRKFRYTPIAVLEEQ+NAELRSV+DE+R KE+DQ+
Sbjct: 61  CRWTPIPPPTSSEDDGAAAPPDEPPRRKFRYTPIAVLEEQRNAELRSVRDEIRTKEMDQS 120

Query: 121 AVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLNGGNQNQESAG 180
           A  TATVSNE  GELNVNE+FKEE+QE  KILNS  +  K+ LDLALCLNG  QNQ+SAG
Sbjct: 121 AAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKSNLDLALCLNG--QNQDSAG 180

Query: 181 KSS 184
           KSS
Sbjct: 181 KSS 181

[Close]

BLAST of MS008107 vs. TAIR 10
Match: AT5G55210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-19
Identity = 70/179 (39.11%), Postives = 97/179 (54.19%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRY-GPAAT-VFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQSNA--- 60
           MEG+GSRL R SSRY GPAAT VF+G VRKWKKKWV  S+SS G+     S+ ++N+   
Sbjct: 1   MEGVGSRLSRTSSRYSGPAATAVFSGRVRKWKKKWVRVSTSSVGVFRASKSNGRNNSNNS 60

Query: 61  ---HKLLLCRWTPIPPPPSTETD-GPTAPPDEPPRRKFRYTPIAVLEEQKNAELRSVKDE 120
              H LLL +WTP+     T +D   +   +E P+R+FRY PIA+LE ++    +     
Sbjct: 61  NSPHHLLLHKWTPLTSATVTASDANGSGETEESPKRRFRYAPIAMLEHREKVISKD---- 120

Query: 121 VRMKEIDQAAVFTATVSNETHGELNVNEVFKEETQETSKILNSPRNANKNRLDLALCLN 171
               EI++   F          EL++N    ++T+E          A    L+L LCLN
Sbjct: 121 ---SEIEETEEFDTESPLPKAVELDMNLTDSDQTKE----------AKTGNLNLGLCLN 162

[Close]

BLAST of MS008107 vs. TAIR 10
Match: AT4G22320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1). )

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-19
Identity = 79/232 (34.05%), Postives = 116/232 (50.00%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQ-------- 60
           MEG+G+RLGR+S+RYGP ATVF GPVRKWKKKWV  S SS   +   SS S         
Sbjct: 1   MEGVGARLGRSSTRYGP-ATVFTGPVRKWKKKWVHVSPSSKKDNNNSSSGSAAAAASVVN 60

Query: 61  -------SNAHKLLLCRWTPIPPPPSTETDGPT-----------APPDEPPRRKFRYTPI 120
                  SN   LLL +W P+    +   DG +              ++PPRR+F+Y PI
Sbjct: 61  GGSNSDGSNGSHLLLYKWAPLSQNGNGNEDGKSESNSPSEDTVATVAEDPPRRRFKYVPI 120

Query: 121 AVLEEQKNAELRSVKDEVRMKEIDQA-------------AVFTATVSNETHGEL------ 180
           AVLEEQK  E+  ++++ +++E D+                 T   S+E   E+      
Sbjct: 121 AVLEEQKK-EITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEVEVEEKP 180

Query: 181 NVNEVFKEETQETSKILNSP------RNANKNRLDLALCLNGGNQNQESAGK 182
           ++N+V  E+ Q   KI+         ++ N++ +DL L LN  + + E+  K
Sbjct: 181 DINDVPMEDIQVEEKIVQDDEEKVVRQDLNESTVDLGLNLNANDADAENDPK 230

[Close]

BLAST of MS008107 vs. TAIR 10
Match: AT4G22320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits to 5363 proteins in 542 species: Archae - 33; Bacteria - 806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses - 151; Other Eukaryotes - 4399 (source: NCBI BLink). )

HSP 1 Score: 91.3 bits (225), Expect = 8.8e-19
Identity = 79/233 (33.91%), Postives = 117/233 (50.21%), Query Frame = 0


Query: 1   MEGIGSRLGRASSRYGPAATVFNGPVRKWKKKWVLASSSSSGLSYQPSSHSQ-------- 60
           MEG+G+RLGR+S+RYGP ATVF GPVRKWKKKWV  S SS   +   SS S         
Sbjct: 1   MEGVGARLGRSSTRYGP-ATVFTGPVRKWKKKWVHVSPSSKKDNNNSSSGSAAAAASVVN 60

Query: 61  -------SNAHKLLLCRWTPIPPPPSTETDGPT-----------APPDEPPRRKFRYTPI 120
                  SN   LLL +W P+    +   DG +              ++PPRR+F+Y PI
Sbjct: 61  GGSNSDGSNGSHLLLYKWAPLSQNGNGNEDGKSESNSPSEDTVATVAEDPPRRRFKYVPI 120

Query: 121 AVLEEQKNAELRSVKDEVRMKEIDQA-------------AVFTATVSNETHGEL------ 180
           AVLEEQK  E+  ++++ +++E D+                 T   S+E   E+      
Sbjct: 121 AVLEEQKK-EITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEVEVEEKP 180

Query: 181 NVNEVFKEETQET-SKILNSP------RNANKNRLDLALCLNGGNQNQESAGK 182
           ++N+V  E+ Q+   KI+         ++ N++ +DL L LN  + + E+  K
Sbjct: 181 DINDVPMEDIQQVEEKIVQDDEEKVVRQDLNESTVDLGLNLNANDADAENDPK 231

The following BLAST results are available for this feature:

BLAST of MS008107 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139775.1	5.4e-95	100.00	uncharacterized protein LOC111010600 [Momordica charantia]	[more]
XP_038898202.1	1.1e-76	84.15	uncharacterized protein LOC120085942 [Benincasa hispida]	[more]
XP_022936275.1	6.2e-75	83.06	uncharacterized protein LOC111442943 [Cucurbita moschata]	[more]
XP_004151087.1	1.8e-74	82.97	uncharacterized protein LOC101212909 [Cucumis sativus] >KGN44051.1 hypothetical ...	[more]
XP_022976368.1	2.4e-74	82.51	uncharacterized protein LOC111476793 [Cucurbita maxima]	[more]

BLAST of MS008107 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS008107 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CD90	2.6e-95	100.00	uncharacterized protein LOC111010600 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1FD66	3.0e-75	83.06	uncharacterized protein LOC111442943 OS=Cucurbita moschata OX=3662 GN=LOC1114429...	[more]
A0A0A0K8E5	8.8e-75	82.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145940 PE=4 SV=1	[more]
A0A6J1ILX5	1.1e-74	82.51	uncharacterized protein LOC111476793 OS=Cucurbita maxima OX=3661 GN=LOC111476793...	[more]
A0A6J1FHM4	4.8e-73	80.87	uncharacterized protein LOC111445863 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MS008107 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55210.1	1.0e-19	39.11	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G22320.2	1.4e-19	34.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G22320.1	8.8e-19	33.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..92
None	No IPR available	PANTHER	PTHR34572:SF8	BNAC09G31710D PROTEIN	coord: 1..182
None	No IPR available	PANTHER	PTHR34572	GOLGIN FAMILY A PROTEIN	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS008107.1	MS008107.1	mRNA