MS006542 (gene) Bitter gourd (TR) v1

Overview


Name	MS006542
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	tobamovirus multiplication protein 1-like
Location	scaffold404: 1005424 .. 1009915 (-)
RNA-Seq Expression	MS006542
Synteny	MS006542

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGGGCGTTTTTAAGGCCGACGAGCTTTGCGGTTGAAGGGGGATTTGAATGGTGGAATGAGATCGACGAATCGGAGCAATGGCAGAATGGGATTTACTACTTCTTGGCTGCCTCTTATGGCATCATTTCCCTCATTGCCTTAGTACTCCACTCTTCTCTTACCCCTTTATGCTCTTTTCGTTCATTTTCTTCGCAGTTCCGGAGTTGTTTATCTAATTTAATGGCCGTATAACGCGATTGTTTGTTTATTTGTTTGTTTGTTTTGTTTTTCTTAGAAAGCATGTTGTTTTGTTGAGTTCGTGTCTTTATTGGGATTGACTGGTTTTACCTGTCTTGTGCTGTAATCTCGTGCCTCACTTTTCTGTTCAAGATAAAACAGGGCTTTCCTCCCGATGGACAAGATCCATAATTGTACTCTCGTGTACCATCAAATTATCGACGAATATAAGTGTTAAGTGTTGATAATTGATTGAATTTACTGTAGCCCATCGGCAAAGTTTTTGAGTTACGGTGGTTTAATATGATATCGGAGGAGGGCTAGAGTTGGGAATGAAGTTAAAACCCCATGGCCACCCATCTTAAGAATTAATTCCTATGGGTTTTCCAGCACCAAATGTTGTAGCGGGCGTCGGGCGGTTGTCCCGTGAAATTAGTTAAGGTGCATGTAAACTAGTTCAGACACTCGAAGATATAAAAAAAAGGAAAAATGGTATCGGTGGAATGTCATTTCTAAGTCCACTGCCACGAGTAGGGGAGTGTTAAGGGTTAATAAAGGATTAAATTTACCGTCCAATGAATTGAGATCTCTCACATATTCAGTTTGTTTGAAGTTTTAAAATAAAATACTCTGTGTGTGGGTTTGTCGTGAGCGTATACTGTATGTGTAAGCTGATAAAAAAGAACTGGATTTTTGGCTTACTTTGAAGAGAGGTTATCTCGGTTCCACTCTCTTTATGAGTTAGGATTTAGTACTTATTGTAAGGTAATTAAGAATGATATGGTGGAGTGTCAACTGTCCAATATGCCCTTGGACAATCAGAATTTATTGTGGGCATTCCGTCTTAGTTTGTTTCATTTGCTTCACTTTCTTCCTCATTTATATCCAACAAGAAAGAGAGTATGACCAAGCCAAGTGGAACCCTTTATGCAGTTTCTTGATAACTTTTGAAATTTACAAATGTAATAAAAACTTTAACCAGATTTTGTAAGTTCAATTAGATGTCTTGGGAAAAAGAACACGATAATTGGTTTGGTCTTTGTAATTAAAGCCTAATACTTAGAGTAATTGCTCAAGTTTTCAGGTTCAACTTATCCGAATTCAAATAAGAGTACCAGAATATGGGTGGACAACACAAAAGGCGTTCCATTTGATGAATTTCATTGTAAATGGATGTAAGATTGTATATTTGTTAATTTTTATTTATTTTTAATTATACTTGATGAGTAAATGTACCTTATTTGCATTTTGATAGTGAGGGCTATTCTCTTTGGGCTTTATAAGAGTGTTTTCCTCATTCGGCCAAAGGTAGGTTTCTTATATTAATTGTGATAATGCCAACAAGGATTTGTAGATTATTAATGTCCTATCGGAGCTATGGTTATCGAGTATATCTAGGCCTCATTTTGATATTGTAGTAATACCATATTGACATTTATTTATTTTGTAACTATATGAAACATCCAGAAGGCTTTCTGAAGGTGAAATTGATAAATAAATATAAACACTCAAAAGCCTTGTTTCCTGATTTCTGTTGGTCAAGAAAATCCAGGGATTTCTTCCTCCTCTGACACTGGGAACCATAACATTGTTAGATGAAGATTTATTGCATTGTGTTAATATTGTTACCCGTCATAATCCACAGTGCAGCAGAGCATCATATTCCCATGCAAAAAAAGCAAGTCAATAAATAGACTTAAATTGATAATCCAGATATTCAGAGAGATCCACATACCTTTTCCCATGATGTAACTACGACTATTTTCTCTGAACCATATGGCTTGGAACTTTCATGTTGGTAAAGGCTCTTGAAATGGTGGTTATGGAGATTCCTGGACTTCTATTTTTTTCAACGTACACTCTGCTTGTTCTATTTTGGGCTGAGATATACCATCAGGTACAAGAATCATTATTCTAATTAATCTGGACGAAGTTATGTTACATATTATATCAATCCTGTGCTAGAATTTTCATTGGTAATCCATTTAGGATATTTTTATTCTCTCAGGCACGGAGTCTTCCTATTGATAAACTTAAGCCCACTTACTGTATCATCAATGGAGTTGTGTATCTTACACAGGTAAGATAGAATATGTCACAACCAAAAGTTGTCTGTACAATGTGAAAACAGAATGAACTGAAATTTGGTTGATTTGTTTATATTAATTTTTTCTTTTCAATTATTTGTCATTGTGTTGCAGATCTGCATTTGGATATTTGTGATGTTAAGCCGAACACATGGTGCAGTTATAGCTGCTAAGCTCTTCTTTTCAGGTTGCAGTTTGAGACATACATTTTTTTCCCTTATATAAAAAACAAATGATATTTTGATATTCATTTTCTAATGTGACAAGAAATGTGATGTATAATTGATGTCCATTTTCAACTGGAACCTTCCATAAAAAATTGTCAACGGGAACCTTTTGGTTTTCACATCCTTGTTTATAGAGGCATATGTAAATGTAATTTTTTTTTCTCTATTGTTTCCAGTGGTTTCATTTTCTGCTGCACTGGGTTTCCTGATATATGGTGGGAGGTAATATCTGTTTATGAGGAGCTGTGGTTACTTATGTTCTACACTAATAACTTTGCTCTTAACAGGCTATTTGTCATGCTGAGACGCTTCCCTATTGAATCTAGAGGGCGCCAAAAAAAGTTGTATGAGGTTGGTTTAGTAATGCGTTCTTTTATGGACTATGCCTGGAAAACATAAGAAATACTGTATAACTAGAATTGTTTGAAGCAATAGAGTTTAAGAAACCTAAATATATGAAAAGGATACATCATTTTTCAATTTTGTCTCCAATGTTCCAACAGAACTATTTCATACCCATATATTTAGAAAAATTTATCCCTATTAGAAGGGTTACATGACATTTCAAAAAATATCTTTTTACATGTGCTAGAAATATCCCCTACACCCTACTGAAATGAAGGTATTGTATCCAATTAGAAAAATGACCCCAGGAAGGAATGAACACAAGACATTCAAATGCTACACCACTACACCACTATTCCATTATTCAATTTCAATAAGAACATATTGAAAAATTTTGAAAGATCGGAATGAAATTAAACTCTTAAAATATTAAGGATGAAATTGAAGAATGGTGTATATTTTAGAGATACATGATAGATTAGCCTTTTAAAGGATGCAGATTTTCTGAAGCTGTGGTTGATTTCTTATTTTTCCTTATCCTTGCAGGTTGGTTGTGTGACAGCAATTTGTTTTAGCTGTTTCTTTATAAGATGTTTTGTGGTAGGACGTTTTGATTTCCTTATGATTTCTGTAATCTTCATACCCATTCCTTAAGCAATTAATACATACATATATTTCTTCATCTTGTAGCTTGCCCTCTCGGCATTTAACAAGGATGCTGATCTTGATGTCCTAGATCATCCCATGCTCAACTTGATATACTACATGGCAAGTTTTCTAATTCCTAGTCTACATTATAATATTTTTTTCAAAGATGAATGGATTATTCTTTTAGTTAGTATTGCTAGTAAACAACTGAGGACGTTAAAAAATATTCTATTTGTTGGGATTATTTAAAGGGATTTACAGGTCTATTGTCTAACCCTTTTTTTTTTTTTAACTTATAAAACAAATATTCATATTATCAATGGATACATTAAATTTAATTTCACATGCTTCTACATAGGAATAAAGATCCACAAGAAAACTTTACAAATTTATTTGGGGGTCATTGATGCTTCTGTGAATGAGACATCAAGTAGAGTGAAGGATTTTAGGCCTAGAAGTATGGTCACAAGCTTGTATAAGATAATCGCGAAGACTTTGGTTGATAAATTGATAAAGGTCTTTCTTAGCATGATTTTTGATTCTTAAGGGGCCTTCATTGTGGGGGGGTAGATTTGGATCAAGTTTTTATTGCTGATGAGGATATTTAGGATCATAGAATTTGTAAAAAAGGTGTCATTGTAAGCGGGATGTTAGCTAAGATCAAGAAGGGAGTTGCGATGGTGAGTATGACTTACAGAAGTCTAGGAAAAATTTATATATATATTTCTTAAATGTGTTATCAGAAGGCATTTATGTTCACTTGGGAGAAATTTATGAAGCATATGTAAGAGACTCCTTTATTGGGATAAGCTGAATTTATTTATTTATTGTTTTATATAATTTCTGATGAATTTGATGTGCATTCTACTGCAGTTGGTAGAGATTGTTCCGTCGGCATTGGTTCTGTTTATACTGAGAAAACTTCCTCCGAGGCGTGTATCTGATCGGTATCACCCCATTGAA

mRNA sequence

ATGGCGAGGGCGTTTTTAAGGCCGACGAGCTTTGCGGTTGAAGGGGGATTTGAATGGTGGAATGAGATCGACGAATCGGAGCAATGGCAGAATGGGATTTACTACTTCTTGGCTGCCTCTTATGGCATCATTTCCCTCATTGCCTTAGTTCAACTTATCCGAATTCAAATAAGAGTACCAGAATATGGGTGGACAACACAAAAGGCGTTCCATTTGATGAATTTCATTGTAAATGGATTGAGGGCTATTCTCTTTGGGCTTTATAAGAGTGTTTTCCTCATTCGGCCAAAGGCTCTTGAAATGGTGGTTATGGAGATTCCTGGACTTCTATTTTTTTCAACGTACACTCTGCTTGTTCTATTTTGGGCTGAGATATACCATCAGGCACGGAGTCTTCCTATTGATAAACTTAAGCCCACTTACTGTATCATCAATGGAGTTGTGTATCTTACACAGATCTGCATTTGGATATTTGTGATGTTAAGCCGAACACATGGTGCAGTTATAGCTGCTAAGCTCTTCTTTTCAGTGGTTTCATTTTCTGCTGCACTGGGTTTCCTGATATATGGTGGGAGGCTATTTGTCATGCTGAGACGCTTCCCTATTGAATCTAGAGGGCGCCAAAAAAAGTTGTATGAGGTTGGTTGTGTGACAGCAATTTGTTTTAGCTGTTTCTTTATAAGATGTTTTGTGCTTGCCCTCTCGGCATTTAACAAGGATGCTGATCTTGATGTCCTAGATCATCCCATGCTCAACTTGATATACTACATGGCAAAGATTGTTCCGTCGGCATTGGTTCTGTTTATACTGAGAAAACTTCCTCCGAGGCGTGTATCTGATCGGTATCACCCCATTGAA

Coding sequence (CDS)

ATGGCGAGGGCGTTTTTAAGGCCGACGAGCTTTGCGGTTGAAGGGGGATTTGAATGGTGGAATGAGATCGACGAATCGGAGCAATGGCAGAATGGGATTTACTACTTCTTGGCTGCCTCTTATGGCATCATTTCCCTCATTGCCTTAGTTCAACTTATCCGAATTCAAATAAGAGTACCAGAATATGGGTGGACAACACAAAAGGCGTTCCATTTGATGAATTTCATTGTAAATGGATTGAGGGCTATTCTCTTTGGGCTTTATAAGAGTGTTTTCCTCATTCGGCCAAAGGCTCTTGAAATGGTGGTTATGGAGATTCCTGGACTTCTATTTTTTTCAACGTACACTCTGCTTGTTCTATTTTGGGCTGAGATATACCATCAGGCACGGAGTCTTCCTATTGATAAACTTAAGCCCACTTACTGTATCATCAATGGAGTTGTGTATCTTACACAGATCTGCATTTGGATATTTGTGATGTTAAGCCGAACACATGGTGCAGTTATAGCTGCTAAGCTCTTCTTTTCAGTGGTTTCATTTTCTGCTGCACTGGGTTTCCTGATATATGGTGGGAGGCTATTTGTCATGCTGAGACGCTTCCCTATTGAATCTAGAGGGCGCCAAAAAAAGTTGTATGAGGTTGGTTGTGTGACAGCAATTTGTTTTAGCTGTTTCTTTATAAGATGTTTTGTGCTTGCCCTCTCGGCATTTAACAAGGATGCTGATCTTGATGTCCTAGATCATCCCATGCTCAACTTGATATACTACATGGCAAAGATTGTTCCGTCGGCATTGGTTCTGTTTATACTGAGAAAACTTCCTCCGAGGCGTGTATCTGATCGGTATCACCCCATTGAA

Protein sequence

MARAFLRPTSFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKAFHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQARSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIYGGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHPMLNLIYYMAKIVPSALVLFILRKLPPRRVSDRYHPIE

Homology

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BLAST of MS006542 vs. NCBI nr
Match: XP_022141918.1 (tobamovirus multiplication protein 1-like isoform X1 [Momordica charantia])

HSP 1 Score: 560.5 bits (1443), Expect = 8.6e-156
Identity = 283/287 (98.61%), Postives = 285/287 (99.30%), Query Frame = 0


Query: 1   MARAFLRPTSFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVP 60
           MA+AFLRPTSFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVP
Sbjct: 1   MAKAFLRPTSFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVP 60

Query: 61  EYGWTTQKAFHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVL 120
           EYGWTTQKAFHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVL
Sbjct: 61  EYGWTTQKAFHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVL 120

Query: 121 FWAEIYHQARSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSF 180
           FWAEIYHQARSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSF
Sbjct: 121 FWAEIYHQARSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSF 180

Query: 181 SAALGFLIYGGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKD 240
           SAALGFLIYGGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKD
Sbjct: 181 SAALGFLIYGGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKD 240

Query: 241 ADLDVLDHPMLNLIYYM-AKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           ADLDVLDHPMLNLIYYM  +IVPSALVLFILRKLPPRRVSDRYHPIE
Sbjct: 241 ADLDVLDHPMLNLIYYMLVEIVPSALVLFILRKLPPRRVSDRYHPIE 287

[Close]

BLAST of MS006542 vs. NCBI nr
Match: XP_038888866.1 (tobamovirus multiplication protein 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 491.5 bits (1264), Expect = 4.9e-135
Identity = 249/287 (86.76%), Postives = 264/287 (91.99%), Query Frame = 0


Query: 1   MARAFLRPTSFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVP 60
           MARA    TS    GG +WWNEIDES+ WQ GIYY L+ASYG+ISLIALVQLIRIQIRVP
Sbjct: 1   MARALATITS--TVGGLQWWNEIDESQDWQRGIYYTLSASYGLISLIALVQLIRIQIRVP 60

Query: 61  EYGWTTQKAFHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVL 120
           E+ WTTQK FHLMNFIVNGLRAILFGLYKSVFLIRPK +EMVVMEIPGLLFFSTYTLLVL
Sbjct: 61  EFEWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIRPKVVEMVVMEIPGLLFFSTYTLLVL 120

Query: 121 FWAEIYHQARSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSF 180
           FWAEIYHQARSLPIDKLKPTYCIINGV+Y+ QICIWI VML  + G+VIAAKLFFSVVSF
Sbjct: 121 FWAEIYHQARSLPIDKLKPTYCIINGVMYVIQICIWIIVMLDHSPGSVIAAKLFFSVVSF 180

Query: 181 SAALGFLIYGGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKD 240
           SAALGFLIYGGRLFVMLR+FPIESRGRQKKLYEVGCVT ICFSCFFIRCFVLALSAF+KD
Sbjct: 181 SAALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKD 240

Query: 241 ADLDVLDHPMLNLIYYM-AKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           ADLDVLDHP+LNLIYYM  ++VPSALVLFILRKLPPRRVSDRYHPIE
Sbjct: 241 ADLDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRVSDRYHPIE 285

[Close]

BLAST of MS006542 vs. NCBI nr
Match: XP_023530045.1 (tobamovirus multiplication protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 486.9 bits (1252), Expect = 1.2e-133
Identity = 240/273 (87.91%), Postives = 259/273 (94.87%), Query Frame = 0


Query: 15  GGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKAFHLMN 74
           GGFEWWN+IDESE WQ GIYY L+ASYG+IS+IALVQLIRIQ+RVPE+ WTTQK FHLMN
Sbjct: 12  GGFEWWNQIDESEDWQKGIYYALSASYGLISIIALVQLIRIQVRVPEFEWTTQKGFHLMN 71

Query: 75  FIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQARSLPI 134
           F+VNGLRAILFGLYKSVFLIRPKALEMVVME+PGLLFFSTYTLLVLFWAEIY+QARSLPI
Sbjct: 72  FVVNGLRAILFGLYKSVFLIRPKALEMVVMEVPGLLFFSTYTLLVLFWAEIYYQARSLPI 131

Query: 135 DKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIYGGRLF 194
           DKLKPTYCIINGV+YL QICIWIFVML+++ GAVI AKLFFSVVS SAALGFLIYGGRLF
Sbjct: 132 DKLKPTYCIINGVIYLIQICIWIFVMLNKSPGAVIGAKLFFSVVSLSAALGFLIYGGRLF 191

Query: 195 VMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHPMLNLI 254
           VMLR+FPIESRGRQKKLYEVGCVT ICF CFFIRCFVLA SAF+KDADLDVLDHP+LNLI
Sbjct: 192 VMLRQFPIESRGRQKKLYEVGCVTTICFICFFIRCFVLAFSAFDKDADLDVLDHPILNLI 251

Query: 255 YYM-AKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           YYM  ++VPSALVLFILRKLPPRR+SDRYHPIE
Sbjct: 252 YYMLVEVVPSALVLFILRKLPPRRMSDRYHPIE 284

[Close]

BLAST of MS006542 vs. NCBI nr
Match: XP_022988878.1 (tobamovirus multiplication protein 1-like [Cucurbita maxima] >XP_022988879.1 tobamovirus multiplication protein 1-like [Cucurbita maxima])

HSP 1 Score: 486.5 bits (1251), Expect = 1.6e-133
Identity = 238/273 (87.18%), Postives = 260/273 (95.24%), Query Frame = 0


Query: 15  GGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKAFHLMN 74
           GGFEWWN+IDESE WQ GIYY L+ASYG+IS+IALVQLIRIQ+RVPE+ WTTQK FHLMN
Sbjct: 12  GGFEWWNQIDESEDWQKGIYYALSASYGLISIIALVQLIRIQVRVPEFEWTTQKGFHLMN 71

Query: 75  FIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQARSLPI 134
           F+VNGLRAILFGLYKSVFLIRPKALEMVVME+PGLLFFSTYTLLVLFWAEIY+QARSLPI
Sbjct: 72  FVVNGLRAILFGLYKSVFLIRPKALEMVVMEVPGLLFFSTYTLLVLFWAEIYYQARSLPI 131

Query: 135 DKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIYGGRLF 194
           DKLKPTYCIINGV+Y+ QICIWIFVML+++ GAVI AKLFFSVVS SAALGFLIYGGRLF
Sbjct: 132 DKLKPTYCIINGVIYVIQICIWIFVMLNKSPGAVIGAKLFFSVVSLSAALGFLIYGGRLF 191

Query: 195 VMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHPMLNLI 254
           VMLR+FPIESRGRQKKLYEVGCVT ICF+CFFIRCFVLA SAF+KD+DLDVLDHP+LNLI
Sbjct: 192 VMLRQFPIESRGRQKKLYEVGCVTTICFTCFFIRCFVLAFSAFDKDSDLDVLDHPILNLI 251

Query: 255 YYM-AKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           YYM  ++VPSALVLFILRKLPPRR+SDRYHPIE
Sbjct: 252 YYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 284

[Close]

BLAST of MS006542 vs. NCBI nr
Match: XP_022927927.1 (tobamovirus multiplication protein 1-like isoform X1 [Cucurbita moschata] >XP_022927928.1 tobamovirus multiplication protein 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 485.7 bits (1249), Expect = 2.7e-133
Identity = 238/273 (87.18%), Postives = 260/273 (95.24%), Query Frame = 0


Query: 15  GGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKAFHLMN 74
           GGFEWWN+IDESE WQ GIYY L+ASYG+IS+IALVQLIRIQ+RVPE+ WTTQK FHLMN
Sbjct: 12  GGFEWWNQIDESEDWQKGIYYTLSASYGLISIIALVQLIRIQVRVPEFEWTTQKGFHLMN 71

Query: 75  FIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQARSLPI 134
           F+VNGLRAILFGLYKSVFLIRPKALEMVVME+PGLLFFSTYTLLVLFWAEIY+QARSLPI
Sbjct: 72  FVVNGLRAILFGLYKSVFLIRPKALEMVVMEVPGLLFFSTYTLLVLFWAEIYYQARSLPI 131

Query: 135 DKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIYGGRLF 194
           D+LKPTYCIINGV+Y+ QICIWIFVML+++ GAVI AKLFFSVVS SAALGFLIYGGRLF
Sbjct: 132 DRLKPTYCIINGVIYVIQICIWIFVMLNKSPGAVIGAKLFFSVVSLSAALGFLIYGGRLF 191

Query: 195 VMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHPMLNLI 254
           VMLR+FPIESRGRQKKLYEVGCVT ICF+CFFIRCFVLA SAF+KDADLDVLDHP+LNLI
Sbjct: 192 VMLRQFPIESRGRQKKLYEVGCVTTICFTCFFIRCFVLAFSAFDKDADLDVLDHPILNLI 251

Query: 255 YYM-AKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           YYM  ++VPSALVLFILRKLPPRR+SDRYHPIE
Sbjct: 252 YYMLVEVVPSALVLFILRKLPPRRMSDRYHPIE 284

[Close]

BLAST of MS006542 vs. ExPASy Swiss-Prot
Match: Q402F4 (Tobamovirus multiplication protein 1 OS=Nicotiana tabacum OX=4097 GN=TOM1 PE=1 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 1.9e-105
Identity = 185/287 (64.46%), Postives = 232/287 (80.84%), Query Frame = 0


Query: 1   MARAFLRPTSFAVEG-GFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRV 60
           M R  L  +S  + G    WW++I+ES QWQ+GI+Y L ASY ++S +AL+QLIRI++RV
Sbjct: 1   MTRLPLGSSSIDIAGPTTNWWDQINESVQWQDGIFYSLCASYALVSAVALIQLIRIELRV 60

Query: 61  PEYGWTTQKAFHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLV 120
           PEYGWTTQK FHLMNF+VNG+RAI+FG +K VFL  PK L + ++++PGLLFFST+TLLV
Sbjct: 61  PEYGWTTQKVFHLMNFVVNGVRAIVFGFHKQVFLFHPKVLSLAILDLPGLLFFSTFTLLV 120

Query: 121 LFWAEIYHQARSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVS 180
           LFWAEIYHQARSLP DKL+ +Y  ING +Y  Q CIW+++  +         K+F +VVS
Sbjct: 121 LFWAEIYHQARSLPTDKLRISYISINGAIYFIQACIWVYLWSNDNSTVEFIGKIFIAVVS 180

Query: 181 FSAALGFLIYGGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNK 240
           F AALGFL+YGGRLF+MLRRFPIES+GR+KKL+EVG VTAICF+CF I CFV+ LSAF+ 
Sbjct: 181 FIAALGFLLYGGRLFLMLRRFPIESKGRRKKLHEVGSVTAICFTCFLISCFVVVLSAFDP 240

Query: 241 DADLDVLDHPMLNLIYY-MAKIVPSALVLFILRKLPPRRVSDRYHPI 286
           DA LDVLDHP+LNLIYY + +I+PSALVL+ILRKLPP+RVS +YHPI
Sbjct: 241 DASLDVLDHPVLNLIYYLLVEILPSALVLYILRKLPPKRVSAQYHPI 287

[Close]

BLAST of MS006542 vs. ExPASy Swiss-Prot
Match: Q9FEG2 (Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOM1 PE=1 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.0e-103
Identity = 181/269 (67.29%), Postives = 225/269 (83.64%), Query Frame = 0


Query: 19  WWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKAFHLMNFIVN 78
           WW++++ES QWQ+GI++ L  +Y ++S +ALVQLIRIQ+RVPEYGWTTQK FHLMNF+VN
Sbjct: 23  WWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWTTQKVFHLMNFVVN 82

Query: 79  GLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQARSLPIDKLK 138
           G+RA+LFG +  VFL+ PKAL  V++++PGLLFFS YTLLVLFWAEIYHQARSLP DKL+
Sbjct: 83  GVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEIYHQARSLPTDKLR 142

Query: 139 PTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIYGGRLFVMLR 198
            TY  +N  VYL QI IW ++ +       +  K+F +VVSF AALGFL+YGGRLF MLR
Sbjct: 143 ITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFMLR 202

Query: 199 RFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHPMLNLIYYM- 258
           RFPIES+GR+KKL+EVG VTAICF+CF IRC V+A+SAF+KD  LDVLDHP+LNLIYYM 
Sbjct: 203 RFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYYMV 262

Query: 259 AKIVPSALVLFILRKLPPRRVSDRYHPIE 287
            +++PSALVLFILRKLPP+RVS +YHPI+
Sbjct: 263 VEVLPSALVLFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of MS006542 vs. ExPASy Swiss-Prot
Match: Q402F3 (Tobamovirus multiplication protein 3 OS=Nicotiana tabacum OX=4097 GN=TOM3 PE=1 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 3.8e-90
Identity = 157/268 (58.58%), Postives = 212/268 (79.10%), Query Frame = 0


Query: 19  WWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKAFHLMNFIVN 78
           WW E++ S  WQ+ +++ LA  YGI+S +ALVQLIRIQ+RVPEYGWTTQK FH +NF+VN
Sbjct: 26  WWEEVNRSRAWQDRLFHVLAILYGIVSAVALVQLIRIQMRVPEYGWTTQKVFHFLNFLVN 85

Query: 79  GLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQARSLPIDKLK 138
           G+R+++F   + V  + P+ ++ +++++P L FF+TY LLVLFWAEIY+QAR++  D L+
Sbjct: 86  GVRSLVFAFRRDVQKLHPEIVQHILLDMPSLAFFTTYALLVLFWAEIYYQARAVSTDGLR 145

Query: 139 PTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIYGGRLFVMLR 198
           P++  INGVVY+ QI +W+ +        VI +K+FF+ VS  AALGFL+YGGRLF+ML+
Sbjct: 146 PSFFTINGVVYVIQIILWLIIWWKPVRVLVILSKMFFAGVSLFAALGFLLYGGRLFLMLQ 205

Query: 199 RFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHPMLNLIYY-M 258
           RFP+ES+GR+KKL EVG VT ICFSCF IRC ++  +AFNK ADLDVLDHP+LNLIYY +
Sbjct: 206 RFPVESKGRRKKLQEVGYVTTICFSCFLIRCVMMCFNAFNKAADLDVLDHPILNLIYYLL 265

Query: 259 AKIVPSALVLFILRKLPPRRVSDRYHPI 286
            +I+PS+LVLFILRKLPP+R   +YHPI
Sbjct: 266 VEILPSSLVLFILRKLPPKRGITQYHPI 293

[Close]

BLAST of MS006542 vs. ExPASy Swiss-Prot
Match: Q948R8 (Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=THH1 PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 6.1e-88
Identity = 155/278 (55.76%), Postives = 216/278 (77.70%), Query Frame = 0


Query: 10  SFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKA 69
           +F ++ G  WW +++ES  WQ+ I++ LA  YGI+S+IA++QL+RIQ+RVPEYGWTTQK 
Sbjct: 16  AFNLKEGKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKV 75

Query: 70  FHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQA 129
           FH +NF+VNG+RA++F   +    ++P+ L+ ++++IP L FF+TY LLVLFWAEIY+QA
Sbjct: 76  FHFLNFMVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQA 135

Query: 130 RSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIY 189
           R++  D L+P++  IN VVY+ QI +W+ +     H  VI +K+FF+ VS  AALGFL+Y
Sbjct: 136 RAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLY 195

Query: 190 GGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHP 249
           GGRLF+ML+RFP+ES+GR+KKL EVG VT ICF+CF IRC ++   AF+  ADLDVLDHP
Sbjct: 196 GGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHP 255

Query: 250 MLNLIYY-MAKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           +LN IYY + +I+PS+LVLFILRKLPP+R   +YH I+
Sbjct: 256 ILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

[Close]

BLAST of MS006542 vs. ExPASy Swiss-Prot
Match: Q9ZUM2 (Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOM3 PE=1 SV=2)

HSP 1 Score: 325.5 bits (833), Expect = 6.1e-88
Identity = 152/268 (56.72%), Postives = 214/268 (79.85%), Query Frame = 0


Query: 19  WWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKAFHLMNFIVN 78
           WW++++ES  WQ+ I++ LA  YGI+SL+A++QL+RIQ+RVPEYGWTTQK FH +NF+VN
Sbjct: 35  WWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQKVFHFLNFVVN 94

Query: 79  GLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQARSLPIDKLK 138
           G+RA++F   ++V  ++P+ L+ ++++IP L FF+TY LLVLFWAEIY+QAR++  D L+
Sbjct: 95  GVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTDGLR 154

Query: 139 PTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIYGGRLFVMLR 198
           P++  IN VVY+ QI +W+ +        VI +K+FF+ VS  AALGFL+YGGRLF+ML+
Sbjct: 155 PSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFLMLQ 214

Query: 199 RFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHPMLNLIYY-M 258
           RFP+ES+GR+KKL EVG VT ICF+CF IRC ++  +AF++ A+LDVLDHP+LN IYY +
Sbjct: 215 RFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIYYLL 274

Query: 259 AKIVPSALVLFILRKLPPRRVSDRYHPI 286
            +I+PS+LVLFILRKLPP+R   +YH I
Sbjct: 275 VEILPSSLVLFILRKLPPKRGITQYHQI 302

[Close]

BLAST of MS006542 vs. ExPASy TrEMBL
Match: A0A6J1CLY0 (tobamovirus multiplication protein 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012173 PE=3 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 4.2e-156
Identity = 283/287 (98.61%), Postives = 285/287 (99.30%), Query Frame = 0


Query: 1   MARAFLRPTSFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVP 60
           MA+AFLRPTSFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVP
Sbjct: 1   MAKAFLRPTSFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVP 60

Query: 61  EYGWTTQKAFHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVL 120
           EYGWTTQKAFHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVL
Sbjct: 61  EYGWTTQKAFHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVL 120

Query: 121 FWAEIYHQARSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSF 180
           FWAEIYHQARSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSF
Sbjct: 121 FWAEIYHQARSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSF 180

Query: 181 SAALGFLIYGGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKD 240
           SAALGFLIYGGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKD
Sbjct: 181 SAALGFLIYGGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKD 240

Query: 241 ADLDVLDHPMLNLIYYM-AKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           ADLDVLDHPMLNLIYYM  +IVPSALVLFILRKLPPRRVSDRYHPIE
Sbjct: 241 ADLDVLDHPMLNLIYYMLVEIVPSALVLFILRKLPPRRVSDRYHPIE 287

[Close]

BLAST of MS006542 vs. ExPASy TrEMBL
Match: A0A6J1JNL1 (tobamovirus multiplication protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111486099 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 7.7e-134
Identity = 238/273 (87.18%), Postives = 260/273 (95.24%), Query Frame = 0


Query: 15  GGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKAFHLMN 74
           GGFEWWN+IDESE WQ GIYY L+ASYG+IS+IALVQLIRIQ+RVPE+ WTTQK FHLMN
Sbjct: 12  GGFEWWNQIDESEDWQKGIYYALSASYGLISIIALVQLIRIQVRVPEFEWTTQKGFHLMN 71

Query: 75  FIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQARSLPI 134
           F+VNGLRAILFGLYKSVFLIRPKALEMVVME+PGLLFFSTYTLLVLFWAEIY+QARSLPI
Sbjct: 72  FVVNGLRAILFGLYKSVFLIRPKALEMVVMEVPGLLFFSTYTLLVLFWAEIYYQARSLPI 131

Query: 135 DKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIYGGRLF 194
           DKLKPTYCIINGV+Y+ QICIWIFVML+++ GAVI AKLFFSVVS SAALGFLIYGGRLF
Sbjct: 132 DKLKPTYCIINGVIYVIQICIWIFVMLNKSPGAVIGAKLFFSVVSLSAALGFLIYGGRLF 191

Query: 195 VMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHPMLNLI 254
           VMLR+FPIESRGRQKKLYEVGCVT ICF+CFFIRCFVLA SAF+KD+DLDVLDHP+LNLI
Sbjct: 192 VMLRQFPIESRGRQKKLYEVGCVTTICFTCFFIRCFVLAFSAFDKDSDLDVLDHPILNLI 251

Query: 255 YYM-AKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           YYM  ++VPSALVLFILRKLPPRR+SDRYHPIE
Sbjct: 252 YYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 284

[Close]

BLAST of MS006542 vs. ExPASy TrEMBL
Match: A0A6J1EME9 (tobamovirus multiplication protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434684 PE=3 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.3e-133
Identity = 238/273 (87.18%), Postives = 260/273 (95.24%), Query Frame = 0


Query: 15  GGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKAFHLMN 74
           GGFEWWN+IDESE WQ GIYY L+ASYG+IS+IALVQLIRIQ+RVPE+ WTTQK FHLMN
Sbjct: 12  GGFEWWNQIDESEDWQKGIYYTLSASYGLISIIALVQLIRIQVRVPEFEWTTQKGFHLMN 71

Query: 75  FIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQARSLPI 134
           F+VNGLRAILFGLYKSVFLIRPKALEMVVME+PGLLFFSTYTLLVLFWAEIY+QARSLPI
Sbjct: 72  FVVNGLRAILFGLYKSVFLIRPKALEMVVMEVPGLLFFSTYTLLVLFWAEIYYQARSLPI 131

Query: 135 DKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIYGGRLF 194
           D+LKPTYCIINGV+Y+ QICIWIFVML+++ GAVI AKLFFSVVS SAALGFLIYGGRLF
Sbjct: 132 DRLKPTYCIINGVIYVIQICIWIFVMLNKSPGAVIGAKLFFSVVSLSAALGFLIYGGRLF 191

Query: 195 VMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHPMLNLI 254
           VMLR+FPIESRGRQKKLYEVGCVT ICF+CFFIRCFVLA SAF+KDADLDVLDHP+LNLI
Sbjct: 192 VMLRQFPIESRGRQKKLYEVGCVTTICFTCFFIRCFVLAFSAFDKDADLDVLDHPILNLI 251

Query: 255 YYM-AKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           YYM  ++VPSALVLFILRKLPPRR+SDRYHPIE
Sbjct: 252 YYMLVEVVPSALVLFILRKLPPRRMSDRYHPIE 284

[Close]

BLAST of MS006542 vs. ExPASy TrEMBL
Match: A0A1S3C0C4 (tobamovirus multiplication protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495421 PE=3 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 2.9e-133
Identity = 247/287 (86.06%), Postives = 261/287 (90.94%), Query Frame = 0


Query: 1   MARAFLRPTSFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVP 60
           MARA    TS A  GGF+WWNEID+SE WQ GIYY LAASY IISLIALVQLIRIQIRVP
Sbjct: 1   MARALSTITSTA--GGFQWWNEIDDSEHWQKGIYYTLAASYAIISLIALVQLIRIQIRVP 60

Query: 61  EYGWTTQKAFHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVL 120
           E+ WTTQK FHLMNFIVNGLRAILFGLYKSVFLI+PK LEMV+MEIPGLLFFSTYTLLVL
Sbjct: 61  EFEWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVL 120

Query: 121 FWAEIYHQARSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSF 180
           FWAEIYHQARSLPI KLKP YCIINGV+Y+ QI IWI VML  + GAVI AKLFFSVVSF
Sbjct: 121 FWAEIYHQARSLPIHKLKPAYCIINGVMYIIQIGIWIIVMLEHSPGAVIVAKLFFSVVSF 180

Query: 181 SAALGFLIYGGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKD 240
           SAALGFLIYGGRLFVMLR+FPIESRGRQKKLYEVGCVT ICFSCFFIRCFVLALSAF+KD
Sbjct: 181 SAALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKD 240

Query: 241 ADLDVLDHPMLNLIYYM-AKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           ADLDVLDHP+LNLIYYM  ++VPSALVLFILRKLPPRR+SDRYHPIE
Sbjct: 241 ADLDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 285

[Close]

BLAST of MS006542 vs. ExPASy TrEMBL
Match: A0A0A0K5Z8 (DUF1084 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062880 PE=3 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 3.2e-132
Identity = 243/287 (84.67%), Postives = 261/287 (90.94%), Query Frame = 0


Query: 1   MARAFLRPTSFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVP 60
           MARA    TS    GGF+ WNEID+S+ WQ GIYY L+ASY +ISLIALVQLIRIQIRVP
Sbjct: 1   MARALSTITS--TLGGFQLWNEIDDSDHWQKGIYYALSASYALISLIALVQLIRIQIRVP 60

Query: 61  EYGWTTQKAFHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVL 120
           E+ WTTQK FHLMNFIVNGLRAILFGLYKSVFLI+PK LEMV+MEIPGLLFFSTYTLLVL
Sbjct: 61  EFEWTTQKGFHLMNFIVNGLRAILFGLYKSVFLIKPKVLEMVIMEIPGLLFFSTYTLLVL 120

Query: 121 FWAEIYHQARSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSF 180
           FWAEIYHQARSLPI KLKPTYCI+NGV+Y+ QICIWI VML  + GAVI AKLFFSVVSF
Sbjct: 121 FWAEIYHQARSLPISKLKPTYCIVNGVMYIIQICIWIIVMLEHSPGAVIVAKLFFSVVSF 180

Query: 181 SAALGFLIYGGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKD 240
           SAALGFLIYGGRLFVMLR+FPIESRGRQKKLYEVGCVT ICFSCFFIRCFVLALSAF+KD
Sbjct: 181 SAALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVTTICFSCFFIRCFVLALSAFDKD 240

Query: 241 ADLDVLDHPMLNLIYYM-AKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           ADLDVLDHP+LNLIYYM  ++VPSALVLFILRKLPPRR+SDRYHPIE
Sbjct: 241 ADLDVLDHPILNLIYYMLVEVVPSALVLFILRKLPPRRISDRYHPIE 285

[Close]

BLAST of MS006542 vs. TAIR 10
Match: AT4G21790.1 (tobamovirus multiplication 1 )

HSP 1 Score: 377.9 bits (969), Expect = 7.4e-105
Identity = 181/269 (67.29%), Postives = 225/269 (83.64%), Query Frame = 0


Query: 19  WWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKAFHLMNFIVN 78
           WW++++ES QWQ+GI++ L  +Y ++S +ALVQLIRIQ+RVPEYGWTTQK FHLMNF+VN
Sbjct: 23  WWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQMRVPEYGWTTQKVFHLMNFVVN 82

Query: 79  GLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQARSLPIDKLK 138
           G+RA+LFG +  VFL+ PKAL  V++++PGLLFFS YTLLVLFWAEIYHQARSLP DKL+
Sbjct: 83  GVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYTLLVLFWAEIYHQARSLPTDKLR 142

Query: 139 PTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIYGGRLFVMLR 198
            TY  +N  VYL QI IW ++ +       +  K+F +VVSF AALGFL+YGGRLF MLR
Sbjct: 143 ITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFMLR 202

Query: 199 RFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHPMLNLIYYM- 258
           RFPIES+GR+KKL+EVG VTAICF+CF IRC V+A+SAF+KD  LDVLDHP+LNLIYYM 
Sbjct: 203 RFPIESKGRRKKLHEVGSVTAICFTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYYMV 262

Query: 259 AKIVPSALVLFILRKLPPRRVSDRYHPIE 287
            +++PSALVLFILRKLPP+RVS +YHPI+
Sbjct: 263 VEVLPSALVLFILRKLPPKRVSAQYHPIQ 291

[Close]

BLAST of MS006542 vs. TAIR 10
Match: AT1G14530.1 (Protein of unknown function (DUF1084) )

HSP 1 Score: 325.5 bits (833), Expect = 4.3e-89
Identity = 155/278 (55.76%), Postives = 216/278 (77.70%), Query Frame = 0


Query: 10  SFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKA 69
           +F ++ G  WW +++ES  WQ+ I++ LA  YGI+S+IA++QL+RIQ+RVPEYGWTTQK 
Sbjct: 16  AFNLKEGKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKV 75

Query: 70  FHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQA 129
           FH +NF+VNG+RA++F   +    ++P+ L+ ++++IP L FF+TY LLVLFWAEIY+QA
Sbjct: 76  FHFLNFMVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQA 135

Query: 130 RSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIY 189
           R++  D L+P++  IN VVY+ QI +W+ +     H  VI +K+FF+ VS  AALGFL+Y
Sbjct: 136 RAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLY 195

Query: 190 GGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHP 249
           GGRLF+ML+RFP+ES+GR+KKL EVG VT ICF+CF IRC ++   AF+  ADLDVLDHP
Sbjct: 196 GGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHP 255

Query: 250 MLNLIYY-MAKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           +LN IYY + +I+PS+LVLFILRKLPP+R   +YH I+
Sbjct: 256 ILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

[Close]

BLAST of MS006542 vs. TAIR 10
Match: AT1G14530.2 (Protein of unknown function (DUF1084) )

HSP 1 Score: 325.5 bits (833), Expect = 4.3e-89
Identity = 155/278 (55.76%), Postives = 216/278 (77.70%), Query Frame = 0


Query: 10  SFAVEGGFEWWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKA 69
           +F ++ G  WW +++ES  WQ+ I++ LA  YGI+S+IA++QL+RIQ+RVPEYGWTTQK 
Sbjct: 16  AFNLKEGKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYGWTTQKV 75

Query: 70  FHLMNFIVNGLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQA 129
           FH +NF+VNG+RA++F   +    ++P+ L+ ++++IP L FF+TY LLVLFWAEIY+QA
Sbjct: 76  FHFLNFMVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQA 135

Query: 130 RSLPIDKLKPTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIY 189
           R++  D L+P++  IN VVY+ QI +W+ +     H  VI +K+FF+ VS  AALGFL+Y
Sbjct: 136 RAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAALGFLLY 195

Query: 190 GGRLFVMLRRFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHP 249
           GGRLF+ML+RFP+ES+GR+KKL EVG VT ICF+CF IRC ++   AF+  ADLDVLDHP
Sbjct: 196 GGRLFLMLQRFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFDAFDDAADLDVLDHP 255

Query: 250 MLNLIYY-MAKIVPSALVLFILRKLPPRRVSDRYHPIE 287
           +LN IYY + +I+PS+LVLFILRKLPP+R   +YH I+
Sbjct: 256 ILNFIYYLLVEILPSSLVLFILRKLPPKRGITQYHQIQ 293

[Close]

BLAST of MS006542 vs. TAIR 10
Match: AT2G02180.1 (tobamovirus multiplication protein 3 )

HSP 1 Score: 325.5 bits (833), Expect = 4.3e-89
Identity = 152/268 (56.72%), Postives = 214/268 (79.85%), Query Frame = 0


Query: 19  WWNEIDESEQWQNGIYYFLAASYGIISLIALVQLIRIQIRVPEYGWTTQKAFHLMNFIVN 78
           WW++++ES  WQ+ I++ LA  YGI+SL+A++QL+RIQ+RVPEYGWTTQK FH +NF+VN
Sbjct: 35  WWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQKVFHFLNFVVN 94

Query: 79  GLRAILFGLYKSVFLIRPKALEMVVMEIPGLLFFSTYTLLVLFWAEIYHQARSLPIDKLK 138
           G+RA++F   ++V  ++P+ L+ ++++IP L FF+TY LLVLFWAEIY+QAR++  D L+
Sbjct: 95  GVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTDGLR 154

Query: 139 PTYCIINGVVYLTQICIWIFVMLSRTHGAVIAAKLFFSVVSFSAALGFLIYGGRLFVMLR 198
           P++  IN VVY+ QI +W+ +        VI +K+FF+ VS  AALGFL+YGGRLF+ML+
Sbjct: 155 PSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFLMLQ 214

Query: 199 RFPIESRGRQKKLYEVGCVTAICFSCFFIRCFVLALSAFNKDADLDVLDHPMLNLIYY-M 258
           RFP+ES+GR+KKL EVG VT ICF+CF IRC ++  +AF++ A+LDVLDHP+LN IYY +
Sbjct: 215 RFPVESKGRRKKLQEVGYVTTICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIYYLL 274

Query: 259 AKIVPSALVLFILRKLPPRRVSDRYHPI 286
            +I+PS+LVLFILRKLPP+R   +YH I
Sbjct: 275 VEILPSSLVLFILRKLPPKRGITQYHQI 302

[Close]

BLAST of MS006542 vs. TAIR 10
Match: AT3G59090.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-09
Identity = 71/292 (24.32%), Postives = 114/292 (39.04%), Query Frame = 0


Query: 44  ISLIALVQLIRIQIRVPEYGWTTQKAFHLMNFIVNGLRAILFGLYKSVFLIR----PKAL 103
           ++ IA +QL R   R  + GWT QK  HLM    N    I F         R      AL
Sbjct: 34  LAFIAFLQLSRFHRRNKQVGWTRQKVLHLMIASSNTGSVIYFVAAVIATCTRWHHWSNAL 93

Query: 104 EMVVMEIPGLLFFSTYTLLVLFWAEIYHQARS----------------LPIDKLKP---- 163
             ++M  P +LF +T+ LL+ FW ++ HQ                   L   K KP    
Sbjct: 94  GFLLMAFPKILFLATFLLLLSFWVDVCHQGNGEEDDDDDEENSIQQVLLEKSKSKPGSSN 153

Query: 164 -----TYCIINGV---------------VYLTQICIWIFVMLSRTHGAVIAAKLFFSVVS 223
                  C  +G+               V++  I   I + ++     + ++ L    V 
Sbjct: 154 ASDRRKCCSFHGIHVGTRQKFVVAAIILVFILMISFAILIWIASGKNPMNSSLLAEVYVD 213

Query: 224 FSAAL------GFLIYGGRLFVMLRRFPIES-RGRQKKLYEVGCVTAICFSCFFIRCFVL 282
             AA+      G   YG RL   LR+   E      +K+  +  V+ +CF+   +   + 
Sbjct: 214 IFAAIILITGGGICFYGLRLLFNLRKVRSEQVSSEMRKVSGLAGVSVVCFTVSSLIALLT 273

The following BLAST results are available for this feature:

BLAST of MS006542 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141918.1	8.6e-156	98.61	tobamovirus multiplication protein 1-like isoform X1 [Momordica charantia]	[more]
XP_038888866.1	4.9e-135	86.76	tobamovirus multiplication protein 1-like isoform X1 [Benincasa hispida]	[more]
XP_023530045.1	1.2e-133	87.91	tobamovirus multiplication protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022988878.1	1.6e-133	87.18	tobamovirus multiplication protein 1-like [Cucurbita maxima] >XP_022988879.1 tob...	[more]
XP_022927927.1	2.7e-133	87.18	tobamovirus multiplication protein 1-like isoform X1 [Cucurbita moschata] >XP_02...	[more]

BLAST of MS006542 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q402F4	1.9e-105	64.46	Tobamovirus multiplication protein 1 OS=Nicotiana tabacum OX=4097 GN=TOM1 PE=1 S...	[more]
Q9FEG2	1.0e-103	67.29	Tobamovirus multiplication protein 1 OS=Arabidopsis thaliana OX=3702 GN=TOM1 PE=...	[more]
Q402F3	3.8e-90	58.58	Tobamovirus multiplication protein 3 OS=Nicotiana tabacum OX=4097 GN=TOM3 PE=1 S...	[more]
Q948R8	6.1e-88	55.76	Protein TOM THREE HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=THH1 PE=2 SV=1	[more]
Q9ZUM2	6.1e-88	56.72	Tobamovirus multiplication protein 3 OS=Arabidopsis thaliana OX=3702 GN=TOM3 PE=...	[more]

BLAST of MS006542 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLY0	4.2e-156	98.61	tobamovirus multiplication protein 1-like isoform X1 OS=Momordica charantia OX=3...	[more]
A0A6J1JNL1	7.7e-134	87.18	tobamovirus multiplication protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1EME9	1.3e-133	87.18	tobamovirus multiplication protein 1-like isoform X1 OS=Cucurbita moschata OX=36...	[more]
A0A1S3C0C4	2.9e-133	86.06	tobamovirus multiplication protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0K5Z8	3.2e-132	84.67	DUF1084 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G062880 PE=...	[more]

BLAST of MS006542 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21790.1	7.4e-105	67.29	tobamovirus multiplication 1	[more]
AT1G14530.1	4.3e-89	55.76	Protein of unknown function (DUF1084)	[more]
AT1G14530.2	4.3e-89	55.76	Protein of unknown function (DUF1084)	[more]
AT2G02180.1	4.3e-89	56.72	tobamovirus multiplication protein 3	[more]
AT3G59090.1	1.2e-09	24.32	CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009457	THH1/TOM1/TOM3 domain	PFAM	PF06454	DUF1084	coord: 18..285 e-value: 4.9E-130 score: 432.8
None	No IPR available	PANTHER	PTHR31142:SF30	SUBFAMILY NOT NAMED	coord: 17..285
IPR040226	THH1/TOM1/TOM3	PANTHER	PTHR31142	TOBAMOVIRUS MULTIPLICATION PROTEIN 1-LIKE ISOFORM X1	coord: 17..285

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS006542.1	MS006542.1	mRNA