MS006160 (gene) Bitter gourd (TR) v1

Overview
NameMS006160
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S acidic ribosomal protein P1-like
Locationscaffold96: 777639 .. 778026 (-)
RNA-Seq ExpressionMS006160
SyntenyMS006160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGACCAGTGAACTCGCTTGCACCTACGCTGCGTTGATTCTTCACGACGACGCCATCTCCGTCACTGTATTATTCTCCTTGATCTCTGTTTCTAATTATTTTGTATTGTTTCTCCGATTTGATTTCCAAGTACTCGATCTGTTTTTAATTTGTTCGATTTTAGGCGGAGAAGATTGTGACATTGGTTAAGGCTGCTGGCCTGACCGTGGAATCATACTGGCCCTCTCTGTTCGCTAAGTTGTCGTCAAAAAGGAACATCGACGATCTCATTCTCAACGTCGGATCTGCTGCTGCTTCTGCTCCTCTGTCCATGGCATCTTCCAGTTCCGCCGATGCCTCTGCCGCTCCCGCTCCTGCTCCTGCGCCCGTCGAGAAGAAGGTACCG

mRNA sequence

ATGTCGACCAGTGAACTCGCTTGCACCTACGCTGCGTTGATTCTTCACGACGACGCCATCTCCGTCACTGCGGAGAAGATTGTGACATTGGTTAAGGCTGCTGGCCTGACCGTGGAATCATACTGGCCCTCTCTGTTCGCTAAGTTGTCGTCAAAAAGGAACATCGACGATCTCATTCTCAACGTCGGATCTGCTGCTGCTTCTGCTCCTCTGTCCATGGCATCTTCCAGTTCCGCCGATGCCTCTGCCGCTCCCGCTCCTGCTCCTGCGCCCGTCGAGAAGAAGGTACCG

Coding sequence (CDS)

ATGTCGACCAGTGAACTCGCTTGCACCTACGCTGCGTTGATTCTTCACGACGACGCCATCTCCGTCACTGCGGAGAAGATTGTGACATTGGTTAAGGCTGCTGGCCTGACCGTGGAATCATACTGGCCCTCTCTGTTCGCTAAGTTGTCGTCAAAAAGGAACATCGACGATCTCATTCTCAACGTCGGATCTGCTGCTGCTTCTGCTCCTCTGTCCATGGCATCTTCCAGTTCCGCCGATGCCTCTGCCGCTCCCGCTCCTGCTCCTGCGCCCGTCGAGAAGAAGGTACCG

Protein sequence

MSTSELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGSAAASAPLSMASSSSADASAAPAPAPAPVEKKVP
Homology
BLAST of MS006160 vs. NCBI nr
Match: XP_022138164.1 (60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia])

HSP 1 Score: 166.4 bits (420), Expect = 1.2e-37
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0

Query: 1  MSTSELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
          MSTSELACTYAALILHDDAISVTAEKI TLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL
Sbjct: 1  MSTSELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60

Query: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK 96
          NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK
Sbjct: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK 95

BLAST of MS006160 vs. NCBI nr
Match: XP_022138163.1 (60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia])

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0

Query: 5   ELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS 64
           ELACTYAALILHDDAISVTAEKI TLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS
Sbjct: 33  ELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS 92

Query: 65  AAASAPLSMASSSSADASAAPAPAPAPVEKK 96
           AAASAPLSMASSSSADASAAPAPAPAPVEKK
Sbjct: 93  AAASAPLSMASSSSADASAAPAPAPAPVEKK 123

BLAST of MS006160 vs. NCBI nr
Match: CAA2623626.1 (unnamed protein product [Spirodela intermedia] >CAA7399610.1 unnamed protein product [Spirodela intermedia])

HSP 1 Score: 115.5 bits (288), Expect = 2.5e-22
Identity = 64/95 (67.37%), Postives = 78/95 (82.11%), Query Frame = 0

Query: 1  MSTSELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
          MS  ELACTYAALILHDD+IS+TAEKI TLVKAA + V+SYWPSLFAKL  KR++DDLIL
Sbjct: 1  MSVGELACTYAALILHDDSISITAEKIATLVKAANVKVDSYWPSLFAKLLEKRSVDDLIL 60

Query: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK 96
          NVGS    AP+++A+++   A+AA   APAPVE+K
Sbjct: 61 NVGSGGGGAPVAVAATAGGGAAAA---APAPVEEK 92

BLAST of MS006160 vs. NCBI nr
Match: MBA0801017.1 (hypothetical protein [Gossypium harknessii])

HSP 1 Score: 115.2 bits (287), Expect = 3.2e-22
Identity = 65/95 (68.42%), Postives = 76/95 (80.00%), Query Frame = 0

Query: 1  MSTSELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
          M+T ELACTYAALILHDD IS+TAEKI TLVKAA L+VESYWPSLFAKL  K N+DDLI 
Sbjct: 1  MATGELACTYAALILHDDGISITAEKIATLVKAANLSVESYWPSLFAKLLEKVNVDDLIT 60

Query: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK 96
          +VGS   +AP+++A++S A   AA A APA  EKK
Sbjct: 61 SVGSGGGAAPVAVAAASGAAGGAAAAAAPAVEEKK 95

BLAST of MS006160 vs. NCBI nr
Match: XP_022736496.1 (60S acidic ribosomal protein P1-like [Durio zibethinus])

HSP 1 Score: 114.8 bits (286), Expect = 4.2e-22
Identity = 65/96 (67.71%), Postives = 77/96 (80.21%), Query Frame = 0

Query: 1  MSTSELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
          M+ SELACTYA+LIL+DD IS+TAEKI TLVKAA + VESYWPSLFAKL  K+NIDDLI 
Sbjct: 1  MAASELACTYASLILYDDGISITAEKIATLVKAANVGVESYWPSLFAKLLEKKNIDDLIT 60

Query: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKKV 97
          NVGS   +AP+++A+S+ A A  A A APA  EKKV
Sbjct: 61 NVGSGGGAAPVAVAASAGAAAGGAAAAAPAVEEKKV 96

BLAST of MS006160 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.9e-20
Identity = 57/95 (60.00%), Postives = 73/95 (76.84%), Query Frame = 0

Query: 1  MSTSELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
          M++ ELAC YAALIL DD I++TAEKI T+VKAA + VESYWP+LFAKL  KRN++DLIL
Sbjct: 1  MASGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLIL 60

Query: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK 96
          +VGS   +AP++ A+ +   A+AA   APA  EKK
Sbjct: 61 SVGSGGGAAPVAAAAPAGGAAAAA---APAVEEKK 92

BLAST of MS006160 vs. ExPASy Swiss-Prot
Match: P29763 (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 2.7e-19
Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 0

Query: 1  MSTSELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
          MSTSELACTYAALILHDD + +TA+ I T+ KAAG+ VE YWP+LFAKL +K+++DDLI 
Sbjct: 1  MSTSELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLIT 60

Query: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKKVP 98
          NVG+   +AP   A++ +A  + A   AP   EKK P
Sbjct: 61 NVGAGGGAAP--AAAAPAAGGAPAAGAAPKKEEKKEP 95

BLAST of MS006160 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 5.0e-18
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 0

Query: 1  MST-SELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLI 60
          MST  ELAC+YA +IL D+ I++TA+KI TLVKAAG+T+ESYWP LFAK++ KRN+ DLI
Sbjct: 1  MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61 LNVGS-AAASAPLSMASSSSADASAAPAPAPAPVEKKVP 98
          +NVG+     AP++ A+ ++   +AA APA    +K  P
Sbjct: 61 MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEP 99

BLAST of MS006160 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 6.6e-18
Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = 0

Query: 1  MST-SELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLI 60
          MST  ELAC+YA +IL D+ I++T++KI TLVKAAG+ +ESYWP LFAK++ KRN+ DLI
Sbjct: 1  MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60

Query: 61 LNVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK 96
          +NVG+        +++++ A A  A A APA  EKK
Sbjct: 61 MNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKK 96

BLAST of MS006160 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2)

HSP 1 Score: 88.6 bits (218), Expect = 4.3e-17
Identity = 51/98 (52.04%), Postives = 69/98 (70.41%), Query Frame = 0

Query: 1  MST-SELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLI 60
          MST  ELAC+YA +IL D+ I++TA+KI TLVKAAG+++ESYWP LFAK++ KRN+ DLI
Sbjct: 1  MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLI 60

Query: 61 LNVGSAAASAPLSMASSSSADASAAPAPAPAPVEKKVP 98
          +NVG+         A++ +A   AA APA    +K  P
Sbjct: 61 MNVGAGGGGGAPVAAAAPAAGGGAAAAPAAEEKKKDEP 98

BLAST of MS006160 vs. ExPASy TrEMBL
Match: A0A6J1C9A3 (60S acidic ribosomal protein P1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009401 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.9e-38
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 0

Query: 1  MSTSELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
          MSTSELACTYAALILHDDAISVTAEKI TLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL
Sbjct: 1  MSTSELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60

Query: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK 96
          NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK
Sbjct: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK 95

BLAST of MS006160 vs. ExPASy TrEMBL
Match: A0A6J1CC92 (60S acidic ribosomal protein P1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009401 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.6e-36
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0

Query: 5   ELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS 64
           ELACTYAALILHDDAISVTAEKI TLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS
Sbjct: 33  ELACTYAALILHDDAISVTAEKIATLVKAAGLTVESYWPSLFAKLSSKRNIDDLILNVGS 92

Query: 65  AAASAPLSMASSSSADASAAPAPAPAPVEKK 96
           AAASAPLSMASSSSADASAAPAPAPAPVEKK
Sbjct: 93  AAASAPLSMASSSSADASAAPAPAPAPVEKK 123

BLAST of MS006160 vs. ExPASy TrEMBL
Match: A0A7I8KP78 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_07009550 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 64/95 (67.37%), Postives = 78/95 (82.11%), Query Frame = 0

Query: 1  MSTSELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
          MS  ELACTYAALILHDD+IS+TAEKI TLVKAA + V+SYWPSLFAKL  KR++DDLIL
Sbjct: 1  MSVGELACTYAALILHDDSISITAEKIATLVKAANVKVDSYWPSLFAKLLEKRSVDDLIL 60

Query: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK 96
          NVGS    AP+++A+++   A+AA   APAPVE+K
Sbjct: 61 NVGSGGGGAPVAVAATAGGGAAAA---APAPVEEK 92

BLAST of MS006160 vs. ExPASy TrEMBL
Match: A0A7J9GTV1 (Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_011410 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-22
Identity = 65/95 (68.42%), Postives = 76/95 (80.00%), Query Frame = 0

Query: 1  MSTSELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
          M+T ELACTYAALILHDD IS+TAEKI TLVKAA L+VESYWPSLFAKL  K N+DDLI 
Sbjct: 1  MATGELACTYAALILHDDGISITAEKIATLVKAANLSVESYWPSLFAKLLEKVNVDDLIT 60

Query: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK 96
          +VGS   +AP+++A++S A   AA A APA  EKK
Sbjct: 61 SVGSGGGAAPVAVAAASGAAGGAAAAAAPAVEEKK 95

BLAST of MS006160 vs. ExPASy TrEMBL
Match: A0A6P5Y931 (60S acidic ribosomal protein P1-like OS=Durio zibethinus OX=66656 GN=LOC111289597 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.1e-22
Identity = 65/96 (67.71%), Postives = 77/96 (80.21%), Query Frame = 0

Query: 1  MSTSELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
          M+ SELACTYA+LIL+DD IS+TAEKI TLVKAA + VESYWPSLFAKL  K+NIDDLI 
Sbjct: 1  MAASELACTYASLILYDDGISITAEKIATLVKAANVGVESYWPSLFAKLLEKKNIDDLIT 60

Query: 61 NVGSAAASAPLSMASSSSADASAAPAPAPAPVEKKV 97
          NVGS   +AP+++A+S+ A A  A A APA  EKKV
Sbjct: 61 NVGSGGGAAPVAVAASAGAAAGGAAAAAPAVEEKKV 96

BLAST of MS006160 vs. TAIR 10
Match: AT5G24510.1 (60S acidic ribosomal protein family )

HSP 1 Score: 95.1 bits (235), Expect = 3.2e-20
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 0

Query: 1  MSTSELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLIL 60
          MSTSELACTYAALILHDD I +TAE I  LVK A + VESYWPSLFAKL  K+NIDDLI+
Sbjct: 1  MSTSELACTYAALILHDDGIEITAENISKLVKTANVNVESYWPSLFAKLCEKKNIDDLIM 60

Query: 61 NVGS--AAASAPLSMASSSSADASAAP 86
          NVG+     + P++ A+ +++ + + P
Sbjct: 61 NVGAGGCGVARPVTTAAPTASQSVSIP 87

BLAST of MS006160 vs. TAIR 10
Match: AT5G47700.1 (60S acidic ribosomal protein family )

HSP 1 Score: 91.7 bits (226), Expect = 3.6e-19
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 0

Query: 1  MST-SELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLI 60
          MST  ELAC+YA +IL D+ I++TA+KI TLVKAAG+T+ESYWP LFAK++ KRN+ DLI
Sbjct: 1  MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61 LNVGS-AAASAPLSMASSSSADASAAPAPAPAPVEKKVP 98
          +NVG+     AP++ A+ ++   +AA APA    +K  P
Sbjct: 61 MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEP 99

BLAST of MS006160 vs. TAIR 10
Match: AT5G47700.2 (60S acidic ribosomal protein family )

HSP 1 Score: 91.7 bits (226), Expect = 3.6e-19
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 0

Query: 1  MST-SELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLI 60
          MST  ELAC+YA +IL D+ I++TA+KI TLVKAAG+T+ESYWP LFAK++ KRN+ DLI
Sbjct: 1  MSTVGELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLI 60

Query: 61 LNVGS-AAASAPLSMASSSSADASAAPAPAPAPVEKKVP 98
          +NVG+     AP++ A+ ++   +AA APA    +K  P
Sbjct: 61 MNVGAGGGGGAPVAAAAPAAGGGAAAAAPAAEEKKKDEP 99

BLAST of MS006160 vs. TAIR 10
Match: AT4G00810.1 (60S acidic ribosomal protein family )

HSP 1 Score: 91.3 bits (225), Expect = 4.7e-19
Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = 0

Query: 1  MST-SELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLI 60
          MST  ELAC+YA +IL D+ I++T++KI TLVKAAG+ +ESYWP LFAK++ KRN+ DLI
Sbjct: 1  MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60

Query: 61 LNVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK 96
          +NVG+        +++++ A A  A A APA  EKK
Sbjct: 61 MNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKK 96

BLAST of MS006160 vs. TAIR 10
Match: AT4G00810.2 (60S acidic ribosomal protein family )

HSP 1 Score: 91.3 bits (225), Expect = 4.7e-19
Identity = 51/96 (53.12%), Postives = 70/96 (72.92%), Query Frame = 0

Query: 1  MST-SELACTYAALILHDDAISVTAEKIVTLVKAAGLTVESYWPSLFAKLSSKRNIDDLI 60
          MST  ELAC+YA +IL D+ I++T++KI TLVKAAG+ +ESYWP LFAK++ KRN+ DLI
Sbjct: 1  MSTVGELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLI 60

Query: 61 LNVGSAAASAPLSMASSSSADASAAPAPAPAPVEKK 96
          +NVG+        +++++ A A  A A APA  EKK
Sbjct: 61 MNVGAGGGGGGAPVSAAAPAAAGGAAAAAPAKEEKK 96

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022138164.11.2e-3798.9560S acidic ribosomal protein P1-like isoform X2 [Momordica charantia][more]
XP_022138163.11.1e-3598.9060S acidic ribosomal protein P1-like isoform X1 [Momordica charantia][more]
CAA2623626.12.5e-2267.37unnamed protein product [Spirodela intermedia] >CAA7399610.1 unnamed protein pro... [more]
MBA0801017.13.2e-2268.42hypothetical protein [Gossypium harknessii][more]
XP_022736496.14.2e-2267.7160S acidic ribosomal protein P1-like [Durio zibethinus][more]
Match NameE-valueIdentityDescription
P528551.9e-2060.0060S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1[more]
P297632.7e-1956.7060S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii OX=3055 PE=3 SV=1[more]
Q8LEQ05.0e-1853.5460S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 ... [more]
O230956.6e-1853.1360S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 ... [more]
Q8LCW94.3e-1752.0460S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 ... [more]
Match NameE-valueIdentityDescription
A0A6J1C9A35.9e-3898.9560S acidic ribosomal protein P1-like isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CC925.6e-3698.9060S acidic ribosomal protein P1-like isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A7I8KP781.2e-2267.37Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_07009550 PE=3 SV... [more]
A0A7J9GTV11.6e-2268.42Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_011410 PE=3 SV... [more]
A0A6P5Y9312.1e-2267.7160S acidic ribosomal protein P1-like OS=Durio zibethinus OX=66656 GN=LOC11128959... [more]
Match NameE-valueIdentityDescription
AT5G24510.13.2e-2059.7760S acidic ribosomal protein family [more]
AT5G47700.13.6e-1953.5460S acidic ribosomal protein family [more]
AT5G47700.23.6e-1953.5460S acidic ribosomal protein family [more]
AT4G00810.14.7e-1953.1360S acidic ribosomal protein family [more]
AT4G00810.24.7e-1953.1360S acidic ribosomal protein family [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 1..63
e-value: 2.8E-32
score: 112.3
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 22..94
e-value: 2.6E-13
score: 50.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..97
NoneNo IPR availablePANTHERPTHR4569660S ACIDIC RIBOSOMAL PROTEIN P1coord: 1..94
NoneNo IPR availableCDDcd05831Ribosomal_P1coord: 5..63
e-value: 9.76124E-29
score: 97.7775

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS006160.1MS006160.1mRNA