MS005006 (gene) Bitter gourd (TR) v1

InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Position :
0
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GAAGTTGTTGAAACACCCTCTACGCTCACAATGCCCCTTCTAGGATACCAAAAAGCGTGGTTAGCTTGGGCATTGGAGAAAGAAGATTCTTTACACAGAGGGGGAATACTTGCAGACGAAAAGGGAATGGGTAAAACTATCCAAGCACTTGCCTTGGTTCTTGCGAAACGGGAATTATCTTCAATTGCTGGACAAAGGAGACCACCAAATGCGAGTTCTAGGGAGGATTTGCCTAAGATGAAAGGTACACTTGTAATATGTCCTGTGATTGCTGTTAGTGTCTGGGTAAGTCAAATTGACCGTTTCACAAGAAGAGGGAGTTACAAGCTGTTAGTCTATCATGGTCCGAAGCGAGCACAGAGTATTGAGAGTTTTTCAGAATATGATTTTGTTATTACCACATACTTTATTGTTGAGGATGATTACATGAAATATCTGATGCTTCCCAAGGAAAGGCCAATTCAACCACAAATATCAAAACGGGCAGAGGGGCAGAAACCATGTGGAGAATTGATATTGCATTCTGTGAAATGGGACCGCATCATTTTGGATGAGGCGAGATTCAAACTATTTGTTTTTTCCAATATTACAAAAGCTATTTTTGCAATTTCTTCTTCATATAGATGGGCTTTACTCGATGGCCCACTTCTTGAGAAACGCACAAGAATGCTTTACTCTCTTGTTTGCTTCCTTCAAGTTCACCCTTATTCGTTCTACCTCTGCAAGGATTGTGATTGTAGAACACTTGATCAAAGTTCTCTTGATTGTCCTAAATGCCCTCATAAACGGGTGAGACATTATTGCTGGTGGAACAAACACATTACCCTGCCGATTCAAAATAGTGGTGGGACTGGCCGAGATTTTAAAAGAGTTATGAGACTTCTGAAAAAAGATATTTTAAGTAGCATTGTTCTCCAGCGCACCAAAAAGGATAAAGCTGCTGATCTTGTCCTTCCTCCTAGTATTGTTTCAATTAGGCGGGATACCCTAGACATTCAAGAAGAAGGCTTTTATGAATCATTGCACGATGAAAGTGCAGCAAAATTTCGCAATTTTGTGGCAGCAGAAAGGGAAACAAATGATTTTGCACACATAGATGACATCTTGGTTCGCTTGAGACAGGCAGTCAATCATCCATATCTTGTGGTGTACTCTAAAACTTCTGCCATAAATTGTGGAAGCTCTACTGATAATAGTAATGAACAACTATGTGGAATTTGTCATATAGCAGCAGAAAATCTTGTGGTTACCTCGTGTGAGCATACATTTTGTAAGGCGTGCATGATTGATTCCACTGATAATTTTTGGGAGCGCATTTCATGTCCTGTTTGCTCAAAGAAGCTCGCAGTTGACTTTTGCACAACTCTTACTGCTGGGGACGAAACCATCAAAACAAGAGTTGAGGGGTTTAAATCTTCAAGTATACTTAACAGAATACCGCTGGAGAATTTTCTTACAAGCACAAAAATAGAAGCTTTGAGAGAAGAAATTATATTGATGTTTGAACGGGATGGATCTGCAAAAGGAATAGTTCTCAGCCAATTCACTTCGTTTTTAGATCTCATTAACTATTCCTTAACAAAGTCCGGCATTTCCTGTGTTCAATTAACAGGAAGCATATCCTTGGCTCAAGGAGGTGATGCCATTGAGAGGTTTGTTCACGATCCAGATTGCAGGATTTTATTAATGAACTTGAACGCTGGAGGGGTTGCTCCCAATCTTACCGTCGCATCGCATGTCTTTATCATGGACCCTTGGTGGAATCCAGCAGTGGAACGGCAAGCCCTAGACAGAGTCAGTCGAATTGGAGCATACAAACCTATCAGG20040060080010001200140016001800Expect = 6.3E-7 / Score = 39.0Score = 10.333036Expect = 6.0E-9 / Score = 45.7Expect = 4.9E-8 / Score = 33.3Score = 9.557864Expect = 1.2E-5 / Score = 34.8Score = 10.645153Expect = 5.7E-6 / Score = 25.3Expect = 3.5E-30 / Score = 104.9Expect = 5.7E-9 / Score = 37.3Expect = 5.7E-38 / Score = 132.7Score = Score = Expect = 1.7E-28 / Score = 101.1Score = Score = Score = Score = Score = Score = Expect = 2.56787E-38 / Score = 136.067Expect = 3.39808E-59 / Score = 195.969Score = Score = SequenceSM00487PS51192SM00490PF00271PS51194SM00184PS50089PF00176PF00176G3DSA:3.30.40.10G3DSA:3.40.50.300SSF52540SSF52540G3DSA:3.40.50.10810PTHR45626PTHR45626PTHR45626:SF33PTHR45626:SF33cd18793cd18008SSF57850PS00518
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 9..252
e-value: 6.3E-7
score: 39.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 26..234
score: 10.333036
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 520..603
e-value: 6.0E-9
score: 45.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 491..603
e-value: 4.9E-8
score: 33.3
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 492..609
score: 9.557864
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 404..444
e-value: 1.2E-5
score: 34.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 404..445
score: 10.645153
IPR000330SNF2, N-terminalPFAMPF00176SNF2_Ncoord: 267..382
e-value: 5.7E-6
score: 25.3
IPR000330SNF2, N-terminalPFAMPF00176SNF2_Ncoord: 31..237
e-value: 3.5E-30
score: 104.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 399..471
e-value: 5.7E-9
score: 37.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 329..609
e-value: 5.7E-38
score: 132.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..280
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 308..607
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 2..327
e-value: 1.7E-28
score: 101.1
NoneNo IPR availablePANTHERPTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDcoord: 1..152
coord: 499..608
NoneNo IPR availablePANTHERPTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDcoord: 167..495
NoneNo IPR availablePANTHERPTHR45626:SF33SUBFAMILY NOT NAMEDcoord: 499..608
NoneNo IPR availablePANTHERPTHR45626:SF33SUBFAMILY NOT NAMEDcoord: 1..152
coord: 167..495
NoneNo IPR availableCDDcd18793SF2_C_SNFcoord: 487..607
e-value: 2.56787E-38
score: 136.067
NoneNo IPR availableCDDcd18008DEXDc_SHPRH-likecoord: 13..307
e-value: 3.39808E-59
score: 195.969
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 398..470
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 419..428