Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTATATGCACAAATTTCATTAAGGATGTGTTCGATCAACATAATGAGACCAGGGAAAGTTACCAGATTGAAGCCCATGTAAAAGATGATATATATTATGTTGTCTTAAACGAGGCAATGAAAGGTTATTGCTCGACATATGACTTGAGAGTAGCAAGAAAAACTGAGAATGTGAAGGATGAAGACCTATATTTGGAAGGTTTGACA
mRNA sequence
GGTATATGCACAAATTTCATTAAGGATGTGTTCGATCAACATAATGAGACCAGGGAAAGTTACCAGATTGAAGCCCATGTAAAAGATGATATATATTATGTTGTCTTAAACGAGGCAATGAAAGGTTATTGCTCGACATATGACTTGAGAGTAGCAAGAAAAACTGAGAATGTGAAGGATGAAGACCTATATTTGGAAGGTTTGACA
Coding sequence (CDS)
GGTATATGCACAAATTTCATTAAGGATGTGTTCGATCAACATAATGAGACCAGGGAAAGTTACCAGATTGAAGCCCATGTAAAAGATGATATATATTATGTTGTCTTAAACGAGGCAATGAAAGGTTATTGCTCGACATATGACTTGAGAGTAGCAAGAAAAACTGAGAATGTGAAGGATGAAGACCTATATTTGGAAGGTTTGACA
Protein sequence
GICTNFIKDVFDQHNETRESYQIEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKDEDLYLEGLT
Homology
BLAST of MS004231 vs. NCBI nr
Match:
XP_022139213.1 (uncharacterized protein LOC111010182 [Momordica charantia])
HSP 1 Score: 142.9 bits (359), Expect = 1.0e-30
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0
Query: 1 GICTNFIKDVFDQHNETRESYQIEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKD 60
GICTNFIKDVFDQHNET ESY+IEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKD
Sbjct: 724 GICTNFIKDVFDQHNETMESYKIEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKD 783
Query: 61 EDLYLEGLT 70
EDLYLEGLT
Sbjct: 784 EDLYLEGLT 792
BLAST of MS004231 vs. NCBI nr
Match:
XP_022985013.1 (uncharacterized protein LOC111483104 [Cucurbita maxima])
HSP 1 Score: 78.6 bits (192), Expect = 2.4e-11
Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 0
Query: 1 GICTNFIKDVFDQHNETRESYQIEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKD 60
GIC FI+D+FDQ +ET ESY IEA +KDDIY++ EAMKGY + ++VKD
Sbjct: 503 GICRIFIRDMFDQLDETMESYSIEAQIKDDIYHIFFMEAMKGY----------RLQDVKD 561
Query: 61 EDLYLEGLT 70
E+LYLEGLT
Sbjct: 563 ENLYLEGLT 561
BLAST of MS004231 vs. NCBI nr
Match:
KAG6601161.1 (hypothetical protein SDJN03_06394, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 77.0 bits (188), Expect = 7.0e-11
Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 0
Query: 1 GICTNFIKDVFDQHNETRESYQIEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKD 60
GIC FI+D+F+Q +ET ESY+IEA +KDDIY++ EAMKGY + ++VKD
Sbjct: 496 GICRIFIRDMFNQLDETMESYKIEAQIKDDIYHIFFMEAMKGY----------RLQDVKD 554
Query: 61 EDLYLEGLT 70
E+LYLEGLT
Sbjct: 556 ENLYLEGLT 554
BLAST of MS004231 vs. NCBI nr
Match:
XP_022956940.1 (uncharacterized protein LOC111458475 [Cucurbita moschata])
HSP 1 Score: 77.0 bits (188), Expect = 7.0e-11
Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 0
Query: 1 GICTNFIKDVFDQHNETRESYQIEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKD 60
GIC FI+D+F+Q +ET ESY+IEA +KDDIY++ EAMKGY + ++VKD
Sbjct: 496 GICRIFIRDMFNQLDETMESYKIEAQIKDDIYHIFFMEAMKGY----------RLQDVKD 554
Query: 61 EDLYLEGLT 70
E+LYLEGLT
Sbjct: 556 ENLYLEGLT 554
BLAST of MS004231 vs. NCBI nr
Match:
KAG7031963.1 (WPP domain-associated protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 77.0 bits (188), Expect = 7.0e-11
Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 0
Query: 1 GICTNFIKDVFDQHNETRESYQIEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKD 60
GIC FI+D+F+Q +ET ESY+IEA +KDDIY++ EAMKGY + ++VKD
Sbjct: 496 GICRIFIRDMFNQLDETMESYKIEAQIKDDIYHIFFMEAMKGY----------RLQDVKD 554
Query: 61 EDLYLEGLT 70
E+LYLEGLT
Sbjct: 556 ENLYLEGLT 554
BLAST of MS004231 vs. ExPASy TrEMBL
Match:
A0A6J1CF63 (uncharacterized protein LOC111010182 OS=Momordica charantia OX=3673 GN=LOC111010182 PE=4 SV=1)
HSP 1 Score: 142.9 bits (359), Expect = 5.0e-31
Identity = 67/69 (97.10%), Postives = 68/69 (98.55%), Query Frame = 0
Query: 1 GICTNFIKDVFDQHNETRESYQIEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKD 60
GICTNFIKDVFDQHNET ESY+IEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKD
Sbjct: 724 GICTNFIKDVFDQHNETMESYKIEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKD 783
Query: 61 EDLYLEGLT 70
EDLYLEGLT
Sbjct: 784 EDLYLEGLT 792
BLAST of MS004231 vs. ExPASy TrEMBL
Match:
A0A6J1JCB6 (uncharacterized protein LOC111483104 OS=Cucurbita maxima OX=3661 GN=LOC111483104 PE=4 SV=1)
HSP 1 Score: 78.6 bits (192), Expect = 1.2e-11
Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 0
Query: 1 GICTNFIKDVFDQHNETRESYQIEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKD 60
GIC FI+D+FDQ +ET ESY IEA +KDDIY++ EAMKGY + ++VKD
Sbjct: 503 GICRIFIRDMFDQLDETMESYSIEAQIKDDIYHIFFMEAMKGY----------RLQDVKD 561
Query: 61 EDLYLEGLT 70
E+LYLEGLT
Sbjct: 563 ENLYLEGLT 561
BLAST of MS004231 vs. ExPASy TrEMBL
Match:
A0A6J1GZ55 (uncharacterized protein LOC111458475 OS=Cucurbita moschata OX=3662 GN=LOC111458475 PE=4 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 3.4e-11
Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 0
Query: 1 GICTNFIKDVFDQHNETRESYQIEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTENVKD 60
GIC FI+D+F+Q +ET ESY+IEA +KDDIY++ EAMKGY + ++VKD
Sbjct: 496 GICRIFIRDMFNQLDETMESYKIEAQIKDDIYHIFFMEAMKGY----------RLQDVKD 554
Query: 61 EDLYLEGLT 70
E+LYLEGLT
Sbjct: 556 ENLYLEGLT 554
BLAST of MS004231 vs. ExPASy TrEMBL
Match:
A0A0A0KWT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623400 PE=4 SV=1)
HSP 1 Score: 60.1 bits (144), Expect = 4.3e-06
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0
Query: 1 GICTNFIKDVFDQHNETRESYQIEAHVKDDIYYVVLNEAMKGYCSTYDLRVARKTE 57
GIC + I+++F+Q +ET +S IEA +KDDIY+VV E M+ YCS DL + R E
Sbjct: 476 GICRDLIRNMFNQLDETMKSNHIEAKIKDDIYHVVFKETMEDYCSINDLGLHRLQE 531
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022139213.1 | 1.0e-30 | 97.10 | uncharacterized protein LOC111010182 [Momordica charantia] | [more] |
XP_022985013.1 | 2.4e-11 | 56.52 | uncharacterized protein LOC111483104 [Cucurbita maxima] | [more] |
KAG6601161.1 | 7.0e-11 | 55.07 | hypothetical protein SDJN03_06394, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022956940.1 | 7.0e-11 | 55.07 | uncharacterized protein LOC111458475 [Cucurbita moschata] | [more] |
KAG7031963.1 | 7.0e-11 | 55.07 | WPP domain-associated protein, partial [Cucurbita argyrosperma subsp. argyrosper... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CF63 | 5.0e-31 | 97.10 | uncharacterized protein LOC111010182 OS=Momordica charantia OX=3673 GN=LOC111010... | [more] |
A0A6J1JCB6 | 1.2e-11 | 56.52 | uncharacterized protein LOC111483104 OS=Cucurbita maxima OX=3661 GN=LOC111483104... | [more] |
A0A6J1GZ55 | 3.4e-11 | 55.07 | uncharacterized protein LOC111458475 OS=Cucurbita moschata OX=3662 GN=LOC1114584... | [more] |
A0A0A0KWT8 | 4.3e-06 | 50.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623400 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |