Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAACTGCATCGTCTTGCCTTGCAGTCAGTCTCCATCGAAGAAGGTAAGAGGGCTCGGAAAAGCCACTCGGGCGGCTACAACAGTCGATCCTGCTACTGAAAATGGTAATGACCCTCTTCTCCATGCTTTTACCTTGCCAACCAAAGTCAGCCCCCAAATTGGGGAGGTTCAAAATGTTGTTCCGTGCCTGAAAGAGCTCGAAAATCTTCTGGTTTCCTCAAAGATAACCTACTCGGATGGGGGAGGAGCAAGGAAGGTGAAAATTGTGGTAACTAAGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGTTTCAGTGTCGGCAAAGATTGTTGAGTTATACAGGCCCCCGCAGAGGGTGTAAAAAATGGCGGCCGTCGTTGTCTGTCATTTCGGAGGAACAAGATTTT
mRNA sequence
ATGGGAAACTGCATCGTCTTGCCTTGCAGTCAGTCTCCATCGAAGAAGGTAAGAGGGCTCGGAAAAGCCACTCGGGCGGCTACAACAGTCGATCCTGCTACTGAAAATGGTAATGACCCTCTTCTCCATGCTTTTACCTTGCCAACCAAAGTCAGCCCCCAAATTGGGGAGGTTCAAAATGTTGTTCCGTGCCTGAAAGAGCTCGAAAATCTTCTGGTTTCCTCAAAGATAACCTACTCGGATGGGGGAGGAGCAAGGAAGGTGAAAATTGTGGTAACTAAGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGTTTCAGTGTCGGCAAAGATTGTTGAGTTATACAGGCCCCCGCAGAGGGTGTAAAAAATGGCGGCCGTCGTTGTCTGTCATTTCGGAGGAACAAGATTTT
Coding sequence (CDS)
ATGGGAAACTGCATCGTCTTGCCTTGCAGTCAGTCTCCATCGAAGAAGGTAAGAGGGCTCGGAAAAGCCACTCGGGCGGCTACAACAGTCGATCCTGCTACTGAAAATGGTAATGACCCTCTTCTCCATGCTTTTACCTTGCCAACCAAAGTCAGCCCCCAAATTGGGGAGGTTCAAAATGTTGTTCCGTGCCTGAAAGAGCTCGAAAATCTTCTGGTTTCCTCAAAGATAACCTACTCGGATGGGGGAGGAGCAAGGAAGGTGAAAATTGTGGTAACTAAGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGTTTCAGTGTCGGCAAAGATTGTTGAGTTATACAGGCCCCCGCAGAGGGTGTAAAAAATGGCGGCCGTCGTTGTCTGTCATTTCGGAGGAACAAGATTTT
Protein sequence
MGNCIVLPCSQSPSKKVRGLGKATRAATTVDPATENGNDPLLHAFTLPTKVSPQIGEVQNVVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGPRRGCKKWRPSLSVISEEQDF
Homology
BLAST of MS002891 vs. NCBI nr
Match:
KGN64995.1 (hypothetical protein Csa_022837 [Cucumis sativus])
HSP 1 Score: 196.4 bits (498), Expect = 1.6e-46
Identity = 103/140 (73.57%), Postives = 112/140 (80.00%), Query Frame = 0
Query: 1 MGNCIVLPCSQSPSKKVRGLGKATRAATT-VDPATENGNDPLLHAFTLPTKVSPQIGEVQ 60
MGNCIVLP +SP KK+RGL KAT ATT V ATE GNDPLL F TK S Q+ EV+
Sbjct: 1 MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR 60
Query: 61 NVVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGP 120
NVVPCLKELENLL S KI YSD GA+KVKIVVTKEQFKLLL+NAKK Q R RLLSYTGP
Sbjct: 61 NVVPCLKELENLLASLKIVYSDEAGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP 120
Query: 121 RRGCKKWRPSLSVISEEQDF 140
R+GCK WRP+LS ISEE+DF
Sbjct: 121 RKGCKNWRPTLSAISEEEDF 140
BLAST of MS002891 vs. NCBI nr
Match:
XP_038877793.1 (uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida])
HSP 1 Score: 184.5 bits (467), Expect = 6.2e-43
Identity = 97/134 (72.39%), Postives = 105/134 (78.36%), Query Frame = 0
Query: 6 VLPCSQSPSKKVRGLGKATRAATTVDPATENGNDPLLHAFTLPTKVSPQIGEVQNVVPCL 65
VL Q P KK+R L KAT D ATE G DPLL FT PT+ Q+GEVQN+VPCL
Sbjct: 10 VLMPYQLPQKKLRELEKAT------DSATECGKDPLLLDFTSPTRTILQVGEVQNIVPCL 69
Query: 66 KELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGPRRGCKK 125
KELENLL SSKI YSDG GARKVKIVVTKEQFKLLLANAKK Q R RLLSYTGPR+GC+K
Sbjct: 70 KELENLLASSKIAYSDGAGARKVKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPRKGCRK 129
Query: 126 WRPSLSVISEEQDF 140
WRP+LS ISEE+DF
Sbjct: 130 WRPTLSAISEEEDF 137
BLAST of MS002891 vs. NCBI nr
Match:
KAA0042344.1 (hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa] >TYK15468.1 hypothetical protein E5676_scaffold477G00390 [Cucumis melo var. makuwa])
HSP 1 Score: 165.6 bits (418), Expect = 3.0e-37
Identity = 89/121 (73.55%), Postives = 97/121 (80.17%), Query Frame = 0
Query: 1 MGNCIVLPCSQSPSKKVRGLGKATRAAT-TVDPATENGNDPLLHAFTLPTKVSPQIGEVQ 60
MGNCIVLP +SP KK++GL KAT AT V A+E GNDPLL TK S Q+GEV+
Sbjct: 1 MGNCIVLPSVRSPQKKLQGLKKATGLATPIVYSASECGNDPLLKYCNSSTKTSLQVGEVR 60
Query: 61 NVVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGP 120
NVVPCLKELENLL SSKI YSDGGGA+KVKIVVT+EQFKLLLANAKK Q R RLLSYTGP
Sbjct: 61 NVVPCLKELENLLASSKIVYSDGGGAKKVKIVVTREQFKLLLANAKKLQSRYRLLSYTGP 120
BLAST of MS002891 vs. NCBI nr
Match:
KAG6583721.1 (hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 162.2 bits (409), Expect = 3.3e-36
Identity = 84/112 (75.00%), Postives = 92/112 (82.14%), Query Frame = 0
Query: 1 MGNCIVLPCSQSPSKKVRGLGKATRAATTVDPATENGNDPLLHAFTLPTKVSPQIGEVQN 60
MGNCIVLPC +SP KK+RG+ KAT ATTVD ATE ND LLH F+ T+ S Q+GEV++
Sbjct: 1 MGNCIVLPCVRSPQKKLRGIEKATDLATTVDSATECCNDHLLHDFSSSTRTSLQVGEVRD 60
Query: 61 VVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQR 113
VVPCLKELE LLVSSKI YSDG GARKVKIVVTKEQFKLLLANAKK Q R R
Sbjct: 61 VVPCLKELEKLLVSSKIVYSDGAGARKVKIVVTKEQFKLLLANAKKLQSRHR 112
BLAST of MS002891 vs. NCBI nr
Match:
XP_023542404.1 (uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 154.1 bits (388), Expect = 9.0e-34
Identity = 85/138 (61.59%), Postives = 94/138 (68.12%), Query Frame = 0
Query: 1 MGNCIVLPCSQSPSKKVRGLGKATRAATTVDPATENGNDPLLHAFTLPTKVSPQIGEVQN 60
MGNCI+LPC SPSK + + AT VD ATE GNDPLL +
Sbjct: 136 MGNCIILPCVHSPSKNL-----SPELATVVDSATEQGNDPLL-----------------D 195
Query: 61 VVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGPR 120
VVPCLKELENLLV K YS GGGAR+VKIVVT+EQFKLLLANAKK Q RLLSY GP
Sbjct: 196 VVPCLKELENLLVYLKTAYSSGGGAREVKIVVTREQFKLLLANAKKMQSAYRLLSYRGPG 251
Query: 121 RGCKKWRPSLSVISEEQD 139
RG +KWRP LSVISEE++
Sbjct: 256 RGRRKWRPMLSVISEEEE 251
BLAST of MS002891 vs. ExPASy TrEMBL
Match:
A0A0A0LSY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173150 PE=4 SV=1)
HSP 1 Score: 196.4 bits (498), Expect = 7.7e-47
Identity = 103/140 (73.57%), Postives = 112/140 (80.00%), Query Frame = 0
Query: 1 MGNCIVLPCSQSPSKKVRGLGKATRAATT-VDPATENGNDPLLHAFTLPTKVSPQIGEVQ 60
MGNCIVLP +SP KK+RGL KAT ATT V ATE GNDPLL F TK S Q+ EV+
Sbjct: 1 MGNCIVLPSVRSPQKKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVR 60
Query: 61 NVVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGP 120
NVVPCLKELENLL S KI YSD GA+KVKIVVTKEQFKLLL+NAKK Q R RLLSYTGP
Sbjct: 61 NVVPCLKELENLLASLKIVYSDEAGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGP 120
Query: 121 RRGCKKWRPSLSVISEEQDF 140
R+GCK WRP+LS ISEE+DF
Sbjct: 121 RKGCKNWRPTLSAISEEEDF 140
BLAST of MS002891 vs. ExPASy TrEMBL
Match:
A0A5D3CW41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00390 PE=4 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 1.5e-37
Identity = 89/121 (73.55%), Postives = 97/121 (80.17%), Query Frame = 0
Query: 1 MGNCIVLPCSQSPSKKVRGLGKATRAAT-TVDPATENGNDPLLHAFTLPTKVSPQIGEVQ 60
MGNCIVLP +SP KK++GL KAT AT V A+E GNDPLL TK S Q+GEV+
Sbjct: 1 MGNCIVLPSVRSPQKKLQGLKKATGLATPIVYSASECGNDPLLKYCNSSTKTSLQVGEVR 60
Query: 61 NVVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQCRQRLLSYTGP 120
NVVPCLKELENLL SSKI YSDGGGA+KVKIVVT+EQFKLLLANAKK Q R RLLSYTGP
Sbjct: 61 NVVPCLKELENLLASSKIVYSDGGGAKKVKIVVTREQFKLLLANAKKLQSRYRLLSYTGP 120
BLAST of MS002891 vs. ExPASy TrEMBL
Match:
A0A314XUU1 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_29074 PE=4 SV=1)
HSP 1 Score: 73.2 bits (178), Expect = 9.8e-10
Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 0
Query: 1 MGNCIVLPCSQSPSKKV-----RGLGKATRAATTVDPATENG--NDPLLH---AFT-LPT 60
MGNC+ + C P +K+ +G + +A+T ++ T L+H FT LP
Sbjct: 1 MGNCLHVLC-HPPQEKIKVVIFKGGVREFKASTPIEEITSGPYIGYKLVHHVQPFTPLPP 60
Query: 61 KVSPQIGEVQNVVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQC 120
+ GEV ++VP L L LV SKI + + +K+KIVVT+EQ +LLL +A KF+
Sbjct: 61 NTKLEPGEVYHLVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANKFRS 120
Query: 121 RQRL---LSYTGPRRGCKKWRPSLSVISEEQDF 140
+ + LS G KWRPSL++I E F
Sbjct: 121 PKEIGVQLSGRSGLEGPPKWRPSLAIIPEVHSF 152
BLAST of MS002891 vs. ExPASy TrEMBL
Match:
A0A6J5UND5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24534 PE=4 SV=1)
HSP 1 Score: 72.8 bits (177), Expect = 1.3e-09
Identity = 53/153 (34.64%), Postives = 78/153 (50.98%), Query Frame = 0
Query: 1 MGNCIVLPCSQSPSKKV-----RGLGKATRAATTVDPATENG--NDPLLHAF----TLPT 60
MGNC+ + C P +K+ +G + +A+T + T L+H LP
Sbjct: 13 MGNCLHVLC-HPPQEKIKVVIFKGGVREFKASTPIKEITSGPYIGYKLVHHIQPYTPLPP 72
Query: 61 KVSPQIGEVQNVVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQC 120
+ GEV ++VP L L LV SKI + + +K+KIVVT+EQ +LLL +A KF+
Sbjct: 73 NTKLEPGEVYHIVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANKFRS 132
Query: 121 RQRL---LSYTGPRRGCKKWRPSLSVISEEQDF 140
+ + LS G KWRPSL++I E F
Sbjct: 133 PKEIGVQLSGRSGLEGSPKWRPSLAIIPEVHSF 164
BLAST of MS002891 vs. ExPASy TrEMBL
Match:
A0A314YSB9 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_06292 PE=4 SV=1)
HSP 1 Score: 72.4 bits (176), Expect = 1.7e-09
Identity = 56/154 (36.36%), Postives = 81/154 (52.60%), Query Frame = 0
Query: 1 MGNCIVLPCSQSPSKKV------RGLGKATRAATTVDPATENG--NDPLLH---AFT-LP 60
MGNC+ + C P +K+ RG+ + +A+T ++ T L+H FT LP
Sbjct: 13 MGNCLHVLC-HPPQEKIKVVIFKRGV-REFKASTPIEEITSGPYIGYKLVHHVQPFTPLP 72
Query: 61 TKVSPQIGEVQNVVPCLKELENLLVSSKITYSDGGGARKVKIVVTKEQFKLLLANAKKFQ 120
+ GEV ++VP L L LV SKI + + +K+KIVVT+EQ +LLL A KF+
Sbjct: 73 PNTKLEPGEVYHLVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKTANKFR 132
Query: 121 CRQRL---LSYTGPRRGCKKWRPSLSVISEEQDF 140
+ + LS G KWRPSL++I E F
Sbjct: 133 SPKEIGVQLSGRSGLEGPPKWRPSLAIIPEVHSF 164
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN64995.1 | 1.6e-46 | 73.57 | hypothetical protein Csa_022837 [Cucumis sativus] | [more] |
XP_038877793.1 | 6.2e-43 | 72.39 | uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida] | [more] |
KAA0042344.1 | 3.0e-37 | 73.55 | hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa] >TYK1546... | [more] |
KAG6583721.1 | 3.3e-36 | 75.00 | hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_023542404.1 | 9.0e-34 | 61.59 | uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LSY9 | 7.7e-47 | 73.57 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173150 PE=4 SV=1 | [more] |
A0A5D3CW41 | 1.5e-37 | 73.55 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A314XUU1 | 9.8e-10 | 35.95 | Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_290... | [more] |
A0A6J5UND5 | 1.3e-09 | 34.64 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24534 PE=4 S... | [more] |
A0A314YSB9 | 1.7e-09 | 36.36 | Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_062... | [more] |
Match Name | E-value | Identity | Description | |