MS002518 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGCAGGCGGTGGGGCGTTCGAGCGGGCAAGGTCGGGAGGTATAAACGACAGAGGAGCTTCAATGTCAGTGAGGCATGGATGTGCAGAAGGCAAATTGCACAACTGTTGCTGCATAAACATTTATGTAAACAGCAACATTCAGGGAGTGAGCAACTCAATATTGAAGAATGGGAGTGAGGTCAAAATGGGAAGCCCAGGAGTTTGGTTCTTCTTTGATCAAAATCCACATCAAAATCCCAACCAATGGCAATGGTTATGGCTGTTGGTTGGTGCTGTGTTGCTGCTCATACTCATTGTTGTTGTGCTGTTGGCGACACCTAAGTTGGGAATGTTTCATTCT ATGGAAGCAGGCGGTGGGGCGTTCGAGCGGGCAAGGTCGGGAGGTATAAACGACAGAGGAGCTTCAATGTCAGTGAGGCATGGATGTGCAGAAGGCAAATTGCACAACTGTTGCTGCATAAACATTTATGTAAACAGCAACATTCAGGGAGTGAGCAACTCAATATTGAAGAATGGGAGTGAGGTCAAAATGGGAAGCCCAGGAGTTTGGTTCTTCTTTGATCAAAATCCACATCAAAATCCCAACCAATGGCAATGGTTATGGCTGTTGGTTGGTGCTGTGTTGCTGCTCATACTCATTGTTGTTGTGCTGTTGGCGACACCTAAGTTGGGAATGTTTCATTCT ATGGAAGCAGGCGGTGGGGCGTTCGAGCGGGCAAGGTCGGGAGGTATAAACGACAGAGGAGCTTCAATGTCAGTGAGGCATGGATGTGCAGAAGGCAAATTGCACAACTGTTGCTGCATAAACATTTATGTAAACAGCAACATTCAGGGAGTGAGCAACTCAATATTGAAGAATGGGAGTGAGGTCAAAATGGGAAGCCCAGGAGTTTGGTTCTTCTTTGATCAAAATCCACATCAAAATCCCAACCAATGGCAATGGTTATGGCTGTTGGTTGGTGCTGTGTTGCTGCTCATACTCATTGTTGTTGTGCTGTTGGCGACACCTAAGTTGGGAATGTTTCATTCT MEAGGGAFERARSGGINDRGASMSVRHGCAEGKLHNCCCINIYVNSNIQGVSNSILKNGSEVKMGSPGVWFFFDQNPHQNPNQWQWLWLLVGAVLLLILIVVVLLATPKLGMFHS Homology
BLAST of MS002518 vs. NCBI nr
Match: KGN46369.1 (hypothetical protein Csa_004893 [Cucumis sativus]) HSP 1 Score: 97.4 bits (241), Expect = 8.3e-17 Identity = 68/121 (56.20%), Postives = 77/121 (63.64%), Query Frame = 0
BLAST of MS002518 vs. NCBI nr
Match: KAA0039894.1 (xyloglucan galactosyltransferase KATAMARI1-like protein [Cucumis melo var. makuwa] >TYK24608.1 xyloglucan galactosyltransferase KATAMARI1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 82.4 bits (202), Expect = 2.8e-12 Identity = 53/75 (70.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of MS002518 vs. NCBI nr
Match: KAG6592845.1 (hypothetical protein SDJN03_12321, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 78.2 bits (191), Expect = 5.2e-11 Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of MS002518 vs. NCBI nr
Match: XP_030470661.1 (uncharacterized protein LOC115688861 [Syzygium oleosum]) HSP 1 Score: 74.3 bits (181), Expect = 7.5e-10 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 0
BLAST of MS002518 vs. NCBI nr
Match: KAG5072492.1 (hypothetical protein JHK86_007703 [Glycine max] >KRH67467.1 hypothetical protein GLYMA_03G167700v4 [Glycine max] >RZC21056.1 hypothetical protein D0Y65_007390 [Glycine soja]) HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 0
BLAST of MS002518 vs. ExPASy TrEMBL
Match: A0A0A0KBZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087970 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 4.0e-17 Identity = 68/121 (56.20%), Postives = 77/121 (63.64%), Query Frame = 0
BLAST of MS002518 vs. ExPASy TrEMBL
Match: A0A5A7T8V9 (Xyloglucan galactosyltransferase KATAMARI1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001550 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.3e-12 Identity = 53/75 (70.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of MS002518 vs. ExPASy TrEMBL
Match: K7KFJ6 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_03G167700 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.2e-10 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 0
BLAST of MS002518 vs. ExPASy TrEMBL
Match: A0A445LCK5 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_007390 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 6.2e-10 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 0
BLAST of MS002518 vs. ExPASy TrEMBL
Match: V7CWU8 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G165400g PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.4e-09 Identity = 41/98 (41.84%), Postives = 61/98 (62.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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