MS001239 (gene) Bitter gourd (TR) v1

Overview


Name	MS001239
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Proteasome subunit beta
Location	scaffold36: 2576586 .. 2580090 (-)
RNA-Seq Expression	MS001239
Synteny	MS001239

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCTCGCGCCATGGATCTCAATGCTCCTCACTCCATGGGTACCACCATCATCGGCGTCACTTACGACGGCGGCGTCGTCCTCGGCGCCGATTCTCGTACCAGCACTGGTAAATTTCTCTCATCTACTCTGTAGCCCTAATTTCTTAGCGTGCTAGCCTTCTTTTATACGAATATTATCTTCAAGAAACGTTTGAAATGATTAAATGCTAGTGGAGGGAAGTTGTAGTTTGCTGATTTTTAGTTTCTGATCTCTCGACCTTGGAAGCAAGTCATTTTGTATCCATCAGTCTTGGAATTAAGCTTGACGTTAGTTGTTTTGAGTTTTTATGAGTAGATGAAAACATAGAAAGAGTTGGTTTCTCGCGTATTTTCCCCCTGATTGACATCTAGTGACAGCAATTTGGTGAATTTTGTTGTTGGTTCGATCCTCTCTATGTAATCTCATGCATTTTTTCAGAACATTACATGGCTGAAATTTAGGCGGGCTTTTCCAAGCTTAGCTGCTTAAAATGACATGCTTTACAAAAAACTATTTGTTTGCTTCCGAGATGGTTGCAGAAAAATTATGAATGGGATGCAATAAACGAACTACATCCTTAACAAAATTATGTAGTGGAGGAAAAATTAACTTGTAAATAACAGCTACCAAATTATGTTTACATTAGCTTGTTGTCCTGAAACATTTTTTTTTTCCAACTCCGTAGCAATCTTAAATAACAAAATTACACTTGAAATGGTAAAATGAATCTTAGTTGGTTCTTTCCGGCCTTTTTTTGTATGTGCCTGCTTTCTTGCGCTGTGTTGATGTTGACTAATTTTTTATTTTCCTTGTGATAGGCTTCTATGTGCCTAATCCTGCATCAGACAAGTTTACGAAGCTCTCTGACAACGTCTATGTTTGTCGGTCTGGCTCGGTATTTCCATTTCTGTTATCTCACATATTGAACTGTCTGTCGATTTTGATGGTGAAAAGGCTTCAATAGTTTTTGCTCTGGTTGGCTTTAGTGTTCAGTTCTAGCCTTAAATTTTCAAGTTTTTTCTTTTAACTTCTCATTCTATAATTAAAATGTGTAAGAGTGTCTCAGTTCATAGGTGTTTTCTCTTGTTTCATTAATGGTTTATTTTGTGCCTCTTGCAGGCTGCAAATTCTCATCTTGTCTTTGCTTATGTGCGTTGCTTCCTTGATACGTGAGTGCTTTAATTACTAAAAATATTATGTTGCAACTTTGAAATGTTGGCTAAATGTAACTTGATCACTTCGAGCGATTTTATTTTTTGCTTGAAAATTTGTGATTGACTTTGGAAGGTTCTGAATGCAACTGCATTATTTTTCATCATGATTTTGTTATTATTCTTTTTTATATTTATTATTATTATTATTCTTTTTATTATTCAGTTTCAGAATTTTCTCTTTGCTGACACAAGTCAATGAAGATGATTTGTACTCATTTCTGTGATTTCTTGTTTTTGTTTTCATTAATATTAATTTATGTGATATAAGTAATGAAGCCACTTGAATTTATATTCAACTTTTTATGTGTTGAGCTCCTACTGATTGTATTTTACCTTTGATGCACAGGATGAAGCGTTTACTTGTCCGGCAGCGTGCGACTGTTAAAGGGGCTGCACACTTCGTCCATCATGTATTAAATACCCACCACAAGGTAGGAGCTCATATTAGTTTATTCAGAATTATTGCCTGGTAAATATGGATAAGAAACATTAGCTTTTTATTGAAAGATTGCAAATTGTCCCAATCCAGGCAAAGAGTTAGAAAAAAGCTATCCAATTTGCCAAAATCATGGAAATAGAATAATCACATATAGCAAGACAGGAGAAACCTTTTATTTCATTGAAAATCCTATTGTTTCTTTCCAACCAGGGTCCATAAAATAGCAAGAATCATATTGATCCATAGGATCCTTCTCTTTTCTGTGAAAGGGCGACTGCCATACGACCTGTTGAAGCTGCTAGTCCAAGCTCGACATTAAGATTTGCCTGTTTATGGGCAGTAGCAATGGCTTTGATCCCCAAAGTTTTGGCATTTCCTATGTTGAGTGTGGCCATAATCTTGTTCTTGATTCAAATTGAACCCATGCTTTAACATCAATGTCATTTGGTCGAATGGGCAGGATATGTTACAAACTGGCCTTATTGTTGGTGGATGGGACAAGTATGAAGGTGGTCGAATCTATGGTATTCCTCTTGGTGGAACAATAATAGAGCAGCCATTTGCTATTGGAGGTAAAACCTTTTTTGCCAATTGCTTATAGAAAATAACGAGGTTTGGTGACTCTTTTTTTTTTTCCTGGTATCCTTGTGCTTTCTTTTTACTTATGTGTTTATATGCAAGTTTTATGATATGATCTTCTGCTTTAGCATCCTTGAATGAATGAATTGTATTTGGTTTTTCATGATCCTGAATCTGGTTCTTGTTAAACTGAACCCATATAGGGTTCTCAAGCATGGAAGTGCTTTAGTCAAGAAAATATCCTCCTACATTTTTCTTTTGGATATTAGATGTCTGACATTTGCTGTTAAAATCCTATGTTCTCTGGTTGCAAGTATGACCACGACCTGTTTCCACTTGTTATTCTACAGGATCTGGCTCCAGTTACTTGTATGGATTTTTTGATCAAGCTTGGAGAGAAGGAATGACCAGGGAAGAAGCTGAGGTATTTGTATACTACTATTATTTTTTGATTAAAGGTTCTGCATTATTATGCTTCTTGCTTGCTGACAATATTATTTTCTGAGTACTTTCTTTTGGGCTCGGACCATTACTAAATGTATGATTATTTACCTGTTCTTCATTCCTCATAGTTGGAAGTTTACCTGTAAGAGACTTTATTTTTAGTAGTTAGGACTTTTAAGAAACGTTGTAAAATACTTTCTTTTTCTTTTAATAAGTACTTTTGAAGGAAGCACTAATTAAGTAAAATACTTAAAGTTGAGCAGTTACTTCTTTTTCTCTTAGCACTCTCAAGTGCAATACTTCTCTCTAACCACTTTAAAGGAAGCACTAATTAAGAGGCAAAAGATTGAATTCTATGCACACTTCCTATGGCTAAAGCAAATCGGCTGAGCTTACTTTCTGTCTATTTTTTCATATTCGGTGCAAGAAGATTTAGTGGTTAGACTCTGTTGATAGGATTATTTTTCTGATTGTTTACTATCATTTGCAGCAATTGGTGGTCAAGGCGGCTTCTCTTGCCATAGCCAGAGATGGTGCTAGTGGTGGTGTTGTTCGTACTGTTACTGTAAGATAATGTCCTTTTATCACAAAATCTGTTACTTTACTTTAAAACAAGTACACGTACAATCCATTGTTCTTGTTGTGAAGAAGCGTAGTGTAAACTCGGGCATTTTTGCAGATAAATTCCGAGGGAGTGACAAGAAAAGTCTATCCTGGGGACCAGCTTCCGCTGTGGCACGAGGAAATAGAGCCTAAAAATTCATTGCTGGATGTTCTGAATGCTTCTAGTCCCGAACCGATGAACATA

mRNA sequence

TCCTCTCGCGCCATGGATCTCAATGCTCCTCACTCCATGGGTACCACCATCATCGGCGTCACTTACGACGGCGGCGTCGTCCTCGGCGCCGATTCTCGTACCAGCACTGGCTTCTATGTGCCTAATCCTGCATCAGACAAGTTTACGAAGCTCTCTGACAACGTCTATGTTTGTCGGTCTGGCTCGGTATTTCCATTTCTGTTATCTCACATATTGAACTGTCTGTCGATTTTGATGGATATGTTACAAACTGGCCTTATTGTTGGTGGATGGGACAAGTATGAAGGTGGTCGAATCTATGGTATTCCTCTTGGTGGAACAATAATAGAGCAGCCATTTGCTATTGGAGGATCTGGCTCCAGTTACTTGTATGGATTTTTTGATCAAGCTTGGAGAGAAGGAATGACCAGGGAAGAAGCTGAGCAATTGGTGGTCAAGGCGGCTTCTCTTGCCATAGCCAGAGATGGTGCTAGTGGTGGTGTTGTTCGTACTGTTACTATAAATTCCGAGGGAGTGACAAGAAAAGTCTATCCTGGGGACCAGCTTCCGCTGTGGCACGAGGAAATAGAGCCTAAAAATTCATTGCTGGATGTTCTGAATGCTTCTAGTCCCGAACCGATGAACATA

Coding sequence (CDS)

TCCTCTCGCGCCATGGATCTCAATGCTCCTCACTCCATGGGTACCACCATCATCGGCGTCACTTACGACGGCGGCGTCGTCCTCGGCGCCGATTCTCGTACCAGCACTGGCTTCTATGTGCCTAATCCTGCATCAGACAAGTTTACGAAGCTCTCTGACAACGTCTATGTTTGTCGGTCTGGCTCGGTATTTCCATTTCTGTTATCTCACATATTGAACTGTCTGTCGATTTTGATGGATATGTTACAAACTGGCCTTATTGTTGGTGGATGGGACAAGTATGAAGGTGGTCGAATCTATGGTATTCCTCTTGGTGGAACAATAATAGAGCAGCCATTTGCTATTGGAGGATCTGGCTCCAGTTACTTGTATGGATTTTTTGATCAAGCTTGGAGAGAAGGAATGACCAGGGAAGAAGCTGAGCAATTGGTGGTCAAGGCGGCTTCTCTTGCCATAGCCAGAGATGGTGCTAGTGGTGGTGTTGTTCGTACTGTTACTATAAATTCCGAGGGAGTGACAAGAAAAGTCTATCCTGGGGACCAGCTTCCGCTGTGGCACGAGGAAATAGAGCCTAAAAATTCATTGCTGGATGTTCTGAATGCTTCTAGTCCCGAACCGATGAACATA

Protein sequence

SSRAMDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGSVFPFLLSHILNCLSILMDMLQTGLIVGGWDKYEGGRIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGASGGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI

Homology

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BLAST of MS001239 vs. NCBI nr
Match: XP_038883996.1 (proteasome subunit beta type-6 [Benincasa hispida])

HSP 1 Score: 351.3 bits (900), Expect = 5.8e-93
Identity = 184/231 (79.65%), Postives = 191/231 (82.68%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           MDLNAPHSMGTTIIGVTYDGGV+LGADSRTSTG YV N ASDK TKL+DNVYVCRSGS  
Sbjct: 5   MDLNAPHSMGTTIIGVTYDGGVILGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAA 64

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     DMLQTGLIVGGWDKYEGGR
Sbjct: 65  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYEGGR 124

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAW+EGMTREEAEQLVVKA SLAIARDGAS
Sbjct: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTREEAEQLVVKAVSLAIARDGAS 184

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 210
           GGVVRTVTINSEGVTRK YPGDQLPLWHEE+EPKNSLLDVLNASSPEPMNI
Sbjct: 185 GGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNI 235

[Close]

BLAST of MS001239 vs. NCBI nr
Match: XP_022962546.1 (proteasome subunit beta type-6-like [Cucurbita moschata] >XP_023545809.1 proteasome subunit beta type-6-like [Cucurbita pepo subsp. pepo] >KAG7029736.1 Proteasome subunit beta type-6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.5 bits (898), Expect = 9.9e-93
Identity = 184/231 (79.65%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTG YV N ASDK TKL+DNVYVCRSGS  
Sbjct: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAA 64

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     DMLQTGLIVGGWDKY GGR
Sbjct: 65  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYNGGR 124

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKA SLAIARDGAS
Sbjct: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGAS 184

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 210
           GGVVRTVTINSEGVTRK YPGDQLPLWHEE+EPKNSLLDVLNASSPEPMN+
Sbjct: 185 GGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235

[Close]

BLAST of MS001239 vs. NCBI nr
Match: XP_022132123.1 (proteasome subunit beta type-6 [Momordica charantia])

HSP 1 Score: 350.1 bits (897), Expect = 1.3e-92
Identity = 185/231 (80.09%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTG YV N ASDK TKL+DNVYVCRSGS  
Sbjct: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAA 64

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     DMLQTGLIVGGWDKY+GGR
Sbjct: 65  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKYDGGR 124

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGM REEAEQLVVKA SLAIARDGAS
Sbjct: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMIREEAEQLVVKAVSLAIARDGAS 184

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 210
           GGVVRTVTINSEGVTRK YPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI
Sbjct: 185 GGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 235

[Close]

BLAST of MS001239 vs. NCBI nr
Match: XP_022996805.1 (proteasome subunit beta type-6-like [Cucurbita maxima])

HSP 1 Score: 348.6 bits (893), Expect = 3.8e-92
Identity = 183/231 (79.22%), Postives = 189/231 (81.82%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTG YV N ASDK TKL+DNVYVCRSGS  
Sbjct: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAA 64

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     DMLQTGLIVGGWDKY GGR
Sbjct: 65  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYNGGR 124

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKA SLAIARDGAS
Sbjct: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGAS 184

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 210
           GGVVRTVTINSEGV RK YPGDQLPLWHEE+EPKNSLLDVLNASSPEPMN+
Sbjct: 185 GGVVRTVTINSEGVARKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235

[Close]

BLAST of MS001239 vs. NCBI nr
Match: XP_022951437.1 (proteasome subunit beta type-6 [Cucurbita moschata] >XP_023002488.1 proteasome subunit beta type-6 [Cucurbita maxima] >XP_023537465.1 proteasome subunit beta type-6 [Cucurbita pepo subsp. pepo] >KAG7020325.1 Proteasome subunit beta type-6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 347.1 bits (889), Expect = 1.1e-91
Identity = 182/231 (78.79%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           MDLNAPHSMGTTIIGVTY+GGVVLGADSRTSTG YV N ASDK TKL+DNVYVCRSGS  
Sbjct: 5   MDLNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAA 64

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     DMLQTGLIVGGWDKYEGGR
Sbjct: 65  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYEGGR 124

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAW+EGMTR+EAEQLVVKA SLAIARDGAS
Sbjct: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTRDEAEQLVVKAVSLAIARDGAS 184

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 210
           GGVVRTVTINSEGVTRK YPGDQLPLWHEE+EPKNSLLD LNASSPEPMNI
Sbjct: 185 GGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDALNASSPEPMNI 235

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BLAST of MS001239 vs. ExPASy Swiss-Prot
Match: Q8LD27 (Proteasome subunit beta type-6 OS=Arabidopsis thaliana OX=3702 GN=PBA1 PE=1 SV=2)

HSP 1 Score: 317.4 bits (812), Expect = 1.2e-85
Identity = 163/229 (71.18%), Postives = 184/229 (80.35%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           ++L+APHSMGTTIIGVTY+GGVVLGADSRTSTG YV N ASDK T+L+DNVYVCRSGS  
Sbjct: 3   LNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAA 62

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     +MLQTGLIVGGWDKYEGG+
Sbjct: 63  DSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGGK 122

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGT++EQPFAIGGSGSSYLYGFFDQAW++ MT+EEAEQLVVKA SLAIARDGAS
Sbjct: 123 IYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGAS 182

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPM 208
           GGVVRTV INSEGVTR  YPGD+L LWHEE+EP+NSLLD+LNA+ PEPM
Sbjct: 183 GGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 231

[Close]

BLAST of MS001239 vs. ExPASy Swiss-Prot
Match: P93395 (Proteasome subunit beta type-6 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.5e-80
Identity = 157/228 (68.86%), Postives = 175/228 (76.75%), Query Frame = 0


Query: 6   DLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS--- 65
           D++ PHSMGTTIIGVTY+GGVVLGADSRTSTG YV N ASDK T+L+DNVYVCRSGS   
Sbjct: 5   DVDQPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAAD 64

Query: 66  -------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGRI 125
                  V  FL  H +            N   +L     D LQTG+I+GGWDKYEGG+I
Sbjct: 65  SQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYEGGKI 124

Query: 126 YGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGASG 185
           YGIP GGT++EQPFAIGGSGSSYLYGFFDQAW+EGMT+EEAE+LVV A SLAIARDGASG
Sbjct: 125 YGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARDGASG 184

Query: 186 GVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPM 208
           GVVRTVTIN +G TRK Y GD L LWHEE+EP NSLLDV+ ASSP PM
Sbjct: 185 GVVRTVTINKDGATRKFYSGDSLQLWHEELEPVNSLLDVVFASSPVPM 232

[Close]

BLAST of MS001239 vs. ExPASy Swiss-Prot
Match: Q3MHN0 (Proteasome subunit beta type-6 OS=Bos taurus OX=9913 GN=PSMB6 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 7.5e-43
Identity = 93/202 (46.04%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 8   NAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS----- 67
           N   S GTTI+ V +DGGVVLGADSRT+TG Y+ N  +DK T + D ++ CRSGS     
Sbjct: 28  NREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQ 87

Query: 68  -----VFPFLLSH---------ILNCLSILMDM-------LQTGLIVGGWDKYEGGRIYG 127
                V   L  H         +    S+  +M       L  G+I+ GWD  EGG++Y 
Sbjct: 88  AVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYS 147

Query: 128 IPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGASGGV 184
           +P+GG ++ QPFAIGGSGSSY+YG+ D  +REGMT+EE  Q    A +LA+ RDG+SGGV
Sbjct: 148 VPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGV 207

[Close]

BLAST of MS001239 vs. ExPASy Swiss-Prot
Match: P28073 (Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3)

HSP 1 Score: 172.6 bits (436), Expect = 4.8e-42
Identity = 91/202 (45.05%), Postives = 122/202 (60.40%), Query Frame = 0


Query: 8   NAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS----- 67
           N   S GTTI+ V +DGGVVLGADSRT+TG Y+ N  +DK T + D+++ CRSGS     
Sbjct: 27  NREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQ 86

Query: 68  -----VFPFLLSH---------ILNCLSILMDM-------LQTGLIVGGWDKYEGGRIYG 127
                V   L  H         +    S+  +M       L  G+I+ GWD  EGG++Y 
Sbjct: 87  AVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYS 146

Query: 128 IPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGASGGV 184
           +P+GG ++ Q FAIGGSGSSY+YG+ D  +REGMT++E  Q    A +LA+ RDG+SGGV
Sbjct: 147 VPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGV 206

[Close]

BLAST of MS001239 vs. ExPASy Swiss-Prot
Match: P28072 (Proteasome subunit beta type-6 OS=Homo sapiens OX=9606 GN=PSMB6 PE=1 SV=4)

HSP 1 Score: 171.8 bits (434), Expect = 8.3e-42
Identity = 91/198 (45.96%), Postives = 120/198 (60.61%), Query Frame = 0


Query: 12  SMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS--------- 71
           S GTTI+ V +DGGVVLGADSRT+TG Y+ N  +DK T + D ++ CRSGS         
Sbjct: 32  STGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVAD 91

Query: 72  -VFPFLLSH---------ILNCLSILMDM-------LQTGLIVGGWDKYEGGRIYGIPLG 131
            V   L  H         +    S+  +M       L  G+I+ GWD  EGG++Y +P+G
Sbjct: 92  AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMG 151

Query: 132 GTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGASGGVVRTV 184
           G ++ Q FAIGGSGSSY+YG+ D  +REGMT+EE  Q    A +LA+ RDG+SGGV+R  
Sbjct: 152 GMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLA 211

[Close]

BLAST of MS001239 vs. ExPASy TrEMBL
Match: A0A6J1HDK0 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111462944 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.8e-93
Identity = 184/231 (79.65%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTG YV N ASDK TKL+DNVYVCRSGS  
Sbjct: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAA 64

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     DMLQTGLIVGGWDKY GGR
Sbjct: 65  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYNGGR 124

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKA SLAIARDGAS
Sbjct: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGAS 184

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 210
           GGVVRTVTINSEGVTRK YPGDQLPLWHEE+EPKNSLLDVLNASSPEPMN+
Sbjct: 185 GGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235

[Close]

BLAST of MS001239 vs. ExPASy TrEMBL
Match: A0A6J1BVE0 (Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111005067 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.3e-93
Identity = 185/231 (80.09%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTG YV N ASDK TKL+DNVYVCRSGS  
Sbjct: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAA 64

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     DMLQTGLIVGGWDKY+GGR
Sbjct: 65  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKDMLQTGLIVGGWDKYDGGR 124

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGM REEAEQLVVKA SLAIARDGAS
Sbjct: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMIREEAEQLVVKAVSLAIARDGAS 184

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 210
           GGVVRTVTINSEGVTRK YPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI
Sbjct: 185 GGVVRTVTINSEGVTRKFYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 235

[Close]

BLAST of MS001239 vs. ExPASy TrEMBL
Match: A0A6J1K7T1 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111491932 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.8e-92
Identity = 183/231 (79.22%), Postives = 189/231 (81.82%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTG YV N ASDK TKL+DNVYVCRSGS  
Sbjct: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAA 64

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     DMLQTGLIVGGWDKY GGR
Sbjct: 65  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYNGGR 124

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKA SLAIARDGAS
Sbjct: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAVSLAIARDGAS 184

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 210
           GGVVRTVTINSEGV RK YPGDQLPLWHEE+EPKNSLLDVLNASSPEPMN+
Sbjct: 185 GGVVRTVTINSEGVARKFYPGDQLPLWHEELEPKNSLLDVLNASSPEPMNV 235

[Close]

BLAST of MS001239 vs. ExPASy TrEMBL
Match: A0A6J1KTP7 (Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111496312 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.3e-92
Identity = 182/231 (78.79%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           MDLNAPHSMGTTIIGVTY+GGVVLGADSRTSTG YV N ASDK TKL+DNVYVCRSGS  
Sbjct: 5   MDLNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAA 64

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     DMLQTGLIVGGWDKYEGGR
Sbjct: 65  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYEGGR 124

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAW+EGMTR+EAEQLVVKA SLAIARDGAS
Sbjct: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTRDEAEQLVVKAVSLAIARDGAS 184

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 210
           GGVVRTVTINSEGVTRK YPGDQLPLWHEE+EPKNSLLD LNASSPEPMNI
Sbjct: 185 GGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDALNASSPEPMNI 235

[Close]

BLAST of MS001239 vs. ExPASy TrEMBL
Match: A0A6J1GHL6 (Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111454253 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.3e-92
Identity = 182/231 (78.79%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           MDLNAPHSMGTTIIGVTY+GGVVLGADSRTSTG YV N ASDK TKL+DNVYVCRSGS  
Sbjct: 5   MDLNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITKLTDNVYVCRSGSAA 64

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     DMLQTGLIVGGWDKYEGGR
Sbjct: 65  DSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLAYNNKDMLQTGLIVGGWDKYEGGR 124

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAW+EGMTR+EAEQLVVKA SLAIARDGAS
Sbjct: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTRDEAEQLVVKAVSLAIARDGAS 184

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPMNI 210
           GGVVRTVTINSEGVTRK YPGDQLPLWHEE+EPKNSLLD LNASSPEPMNI
Sbjct: 185 GGVVRTVTINSEGVTRKFYPGDQLPLWHEELEPKNSLLDALNASSPEPMNI 235

[Close]

BLAST of MS001239 vs. TAIR 10
Match: AT4G31300.1 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 317.4 bits (812), Expect = 8.6e-87
Identity = 163/229 (71.18%), Postives = 184/229 (80.35%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           ++L+APHSMGTTIIGVTY+GGVVLGADSRTSTG YV N ASDK T+L+DNVYVCRSGS  
Sbjct: 3   LNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAA 62

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     +MLQTGLIVGGWDKYEGG+
Sbjct: 63  DSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGGK 122

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGT++EQPFAIGGSGSSYLYGFFDQAW++ MT+EEAEQLVVKA SLAIARDGAS
Sbjct: 123 IYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGAS 182

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPM 208
           GGVVRTV INSEGVTR  YPGD+L LWHEE+EP+NSLLD+LNA+ PEPM
Sbjct: 183 GGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 231

[Close]

BLAST of MS001239 vs. TAIR 10
Match: AT4G31300.2 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 317.4 bits (812), Expect = 8.6e-87
Identity = 163/230 (70.87%), Postives = 184/230 (80.00%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           ++L+APHSMGTTIIGVTY+GGVVLGADSRTSTG YV N ASDK T+L+DNVYVCRSGS  
Sbjct: 3   LNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAA 62

Query: 65  --------VFPFLLSHIL------------NCLSIL-----MDMLQTGLIVGGWDKYEGG 124
                   V  FL  H +            N + +L      +MLQTGLIVGGWDKYEGG
Sbjct: 63  DSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKQNMLQTGLIVGGWDKYEGG 122

Query: 125 RIYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGA 184
           +IYGIPLGGT++EQPFAIGGSGSSYLYGFFDQAW++ MT+EEAEQLVVKA SLAIARDGA
Sbjct: 123 KIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGA 182

Query: 185 SGGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPM 208
           SGGVVRTV INSEGVTR  YPGD+L LWHEE+EP+NSLLD+LNA+ PEPM
Sbjct: 183 SGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 232

[Close]

BLAST of MS001239 vs. TAIR 10
Match: AT4G31300.3 (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein )

HSP 1 Score: 317.4 bits (812), Expect = 8.6e-87
Identity = 163/229 (71.18%), Postives = 184/229 (80.35%), Query Frame = 0


Query: 5   MDLNAPHSMGTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGS-- 64
           ++L+APHSMGTTIIGVTY+GGVVLGADSRTSTG YV N ASDK T+L+DNVYVCRSGS  
Sbjct: 3   LNLDAPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAA 62

Query: 65  --------VFPFLLSHIL------------NCLSIL----MDMLQTGLIVGGWDKYEGGR 124
                   V  FL  H +            N + +L     +MLQTGLIVGGWDKYEGG+
Sbjct: 63  DSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDKYEGGK 122

Query: 125 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 184
           IYGIPLGGT++EQPFAIGGSGSSYLYGFFDQAW++ MT+EEAEQLVVKA SLAIARDGAS
Sbjct: 123 IYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGAS 182

Query: 185 GGVVRTVTINSEGVTRKVYPGDQLPLWHEEIEPKNSLLDVLNASSPEPM 208
           GGVVRTV INSEGVTR  YPGD+L LWHEE+EP+NSLLD+LNA+ PEPM
Sbjct: 183 GGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPM 231

[Close]

BLAST of MS001239 vs. TAIR 10
Match: AT5G40580.1 (20S proteasome beta subunit PBB2 )

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 54/184 (29.35%), Postives = 84/184 (45.65%), Query Frame = 0


Query: 7   LNAPHSM--GTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGSVF 66
           L AP  +  GTTI+G+ +  GV+LGAD+R + G  V +   +K   ++ N+Y C +G+  
Sbjct: 30  LKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAA 89

Query: 67  PFLL-------------------SHILNCLSILMDML-------QTGLIVGGWDKYEGGR 126
                                  S ++  L++L   L          L++GG D   G  
Sbjct: 90  DTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD-ITGPH 149

Query: 127 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 163
           ++ I   G+    PFA  GSGS      F+  ++EG+TR+E  +LV +A    I  D  S
Sbjct: 150 LHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGS 209

[Close]

BLAST of MS001239 vs. TAIR 10
Match: AT5G40580.2 (20S proteasome beta subunit PBB2 )

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-11
Identity = 54/184 (29.35%), Postives = 84/184 (45.65%), Query Frame = 0


Query: 7   LNAPHSM--GTTIIGVTYDGGVVLGADSRTSTGFYVPNPASDKFTKLSDNVYVCRSGSVF 66
           L AP  +  GTTI+G+ +  GV+LGAD+R + G  V +   +K   ++ N+Y C +G+  
Sbjct: 30  LKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAA 89

Query: 67  PFLL-------------------SHILNCLSILMDML-------QTGLIVGGWDKYEGGR 126
                                  S ++  L++L   L          L++GG D   G  
Sbjct: 90  DTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD-ITGPH 149

Query: 127 IYGIPLGGTIIEQPFAIGGSGSSYLYGFFDQAWREGMTREEAEQLVVKAASLAIARDGAS 163
           ++ I   G+    PFA  GSGS      F+  ++EG+TR+E  +LV +A    I  D  S
Sbjct: 150 LHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGS 209

The following BLAST results are available for this feature:

BLAST of MS001239 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883996.1	5.8e-93	79.65	proteasome subunit beta type-6 [Benincasa hispida]	[more]
XP_022962546.1	9.9e-93	79.65	proteasome subunit beta type-6-like [Cucurbita moschata] >XP_023545809.1 proteas...	[more]
XP_022132123.1	1.3e-92	80.09	proteasome subunit beta type-6 [Momordica charantia]	[more]
XP_022996805.1	3.8e-92	79.22	proteasome subunit beta type-6-like [Cucurbita maxima]	[more]
XP_022951437.1	1.1e-91	78.79	proteasome subunit beta type-6 [Cucurbita moschata] >XP_023002488.1 proteasome s...	[more]

BLAST of MS001239 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LD27	1.2e-85	71.18	Proteasome subunit beta type-6 OS=Arabidopsis thaliana OX=3702 GN=PBA1 PE=1 SV=2	[more]
P93395	1.5e-80	68.86	Proteasome subunit beta type-6 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q3MHN0	7.5e-43	46.04	Proteasome subunit beta type-6 OS=Bos taurus OX=9913 GN=PSMB6 PE=1 SV=1	[more]
P28073	4.8e-42	45.05	Proteasome subunit beta type-6 OS=Rattus norvegicus OX=10116 GN=Psmb6 PE=1 SV=3	[more]
P28072	8.3e-42	45.96	Proteasome subunit beta type-6 OS=Homo sapiens OX=9606 GN=PSMB6 PE=1 SV=4	[more]

BLAST of MS001239 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDK0	4.8e-93	79.65	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111462944 PE=3 SV=1	[more]
A0A6J1BVE0	6.3e-93	80.09	Proteasome subunit beta OS=Momordica charantia OX=3673 GN=LOC111005067 PE=3 SV=1	[more]
A0A6J1K7T1	1.8e-92	79.22	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111491932 PE=3 SV=1	[more]
A0A6J1KTP7	5.3e-92	78.79	Proteasome subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111496312 PE=3 SV=1	[more]
A0A6J1GHL6	5.3e-92	78.79	Proteasome subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111454253 PE=3 SV=1	[more]

BLAST of MS001239 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31300.1	8.6e-87	71.18	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT4G31300.2	8.6e-87	70.87	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT4G31300.3	8.6e-87	71.18	N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein	[more]
AT5G40580.1	1.6e-11	29.35	20S proteasome beta subunit PBB2	[more]
AT5G40580.2	1.6e-11	29.35	20S proteasome beta subunit PBB2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 8..64 e-value: 1.6E-14 score: 55.8
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 66..188 e-value: 3.2E-30 score: 107.1
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 7..186
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 81..167 e-value: 4.0E-17 score: 62.3 coord: 13..63 e-value: 1.3E-10 score: 41.1
None	No IPR available	PANTHER	PTHR11599:SF151	PROTEASOME SUBUNIT BETA	coord: 80..207
None	No IPR available	PANTHER	PTHR11599:SF151	PROTEASOME SUBUNIT BETA	coord: 7..63
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 80..207
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 7..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS001239.1	MS001239.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0005839	proteasome core complex