Homology
BLAST of MS001214 vs. NCBI nr
Match:
XP_022131722.1 (exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia] >XP_022131723.1 exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia] >XP_022131724.1 exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia])
HSP 1 Score: 459.1 bits (1180), Expect = 2.2e-125
Identity = 234/242 (96.69%), Postives = 235/242 (97.11%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ LLPCAI
Sbjct: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQVIHDDGALLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 236
KGSTQ+VDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS
Sbjct: 181 KGSTQVVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 240
BLAST of MS001214 vs. NCBI nr
Match:
XP_022951618.1 (exosome complex exonuclease RRP46 homolog [Cucurbita moschata] >KAG6585390.1 Exosome complex exonuclease RRP46-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020307.1 Exosome complex exonuclease RRP46-like protein [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118
Identity = 222/243 (91.36%), Postives = 229/243 (94.24%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1 MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSI+VQ LLPCAI
Sbjct: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NASCAALVDAGIPLKHLAVAI CCLSESGYVILDPTKLEEQKMKA VHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GSTQ+ EPLE+GIITS+TQGAMSVDDYIHCLERGRAATAKMS FLRRSLQPQLP DSS
Sbjct: 181 EGSTQVAGEPLENGIITSLTQGAMSVDDYIHCLERGRAATAKMSAFLRRSLQPQLPTDSS 240
BLAST of MS001214 vs. NCBI nr
Match:
XP_023538111.1 (exosome complex exonuclease RRP46 homolog [Cucurbita pepo subsp. pepo])
HSP 1 Score: 435.6 bits (1119), Expect = 2.6e-118
Identity = 222/243 (91.36%), Postives = 229/243 (94.24%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
MEMDRDDGRTANQLRPLACSCNVLNRA+GSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1 MEMDRDDGRTANQLRPLACSCNVLNRAYGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSI+VQ LLPCAI
Sbjct: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NASCAALVDAGIPLKHLAVAI CCLSESGYVILDPTKLEEQKMKA VHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GSTQ+ EPLE+GIITS+TQGAMSVDDYIHCLERGRAATAKMS FLRRSLQPQLP DSS
Sbjct: 181 EGSTQVAGEPLENGIITSLTQGAMSVDDYIHCLERGRAATAKMSAFLRRSLQPQLPTDSS 240
BLAST of MS001214 vs. NCBI nr
Match:
XP_023002484.1 (exosome complex exonuclease RRP46 homolog [Cucurbita maxima])
HSP 1 Score: 435.3 bits (1118), Expect = 3.5e-118
Identity = 222/243 (91.36%), Postives = 229/243 (94.24%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1 MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSI+VQ LLPCAI
Sbjct: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NASCAALVDAGIPLKHLAVAI CCLSESGYVILDPTKLEEQKMKA VHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GSTQ+ EPLE+GIITS+TQGAMSVDDYIHCLERGRAATAKMS FLRRSLQPQLP DSS
Sbjct: 181 EGSTQVGGEPLENGIITSLTQGAMSVDDYIHCLERGRAATAKMSAFLRRSLQPQLPTDSS 240
BLAST of MS001214 vs. NCBI nr
Match:
XP_038885208.1 (exosome complex exonuclease RRP46 homolog [Benincasa hispida])
HSP 1 Score: 433.3 bits (1113), Expect = 1.3e-117
Identity = 222/243 (91.36%), Postives = 228/243 (93.83%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1 MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
SIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNTTTSIIVQ LLPCAI
Sbjct: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NASCAALVDAGIPLKHLAVAI CCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVVP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GS Q+VDEPLEHGIITSVTQG+MSVDDYI CLERG AA+AKMS FLRRSLQPQLP DSS
Sbjct: 181 EGSRQVVDEPLEHGIITSVTQGSMSVDDYILCLERGCAASAKMSAFLRRSLQPQLPTDSS 240
BLAST of MS001214 vs. ExPASy Swiss-Prot
Match:
Q9LX74 (Exosome complex exonuclease RRP46 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP46 PE=2 SV=1)
HSP 1 Score: 353.2 bits (905), Expect = 2.3e-96
Identity = 175/243 (72.02%), Postives = 206/243 (84.77%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DR+DGRT NQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNTTTS+I+Q LLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NA+CAALVDAGIP+KHLAVAICCCL+E+GY++LDP KLEE+KM AF +LVFPN+ +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GS+ EP+EHGIITS+T G MSVDDY C+E GRAATA +S F R++ Q SS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQ----QSSS 239
BLAST of MS001214 vs. ExPASy Swiss-Prot
Match:
Q84T68 (Exosome complex exonuclease RRP46 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RRP46 PE=1 SV=2)
HSP 1 Score: 294.3 bits (752), Expect = 1.2e-78
Identity = 154/238 (64.71%), Postives = 181/238 (76.05%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME R DGR NQLRP +C+ N L+RAHGSA W+QGDT VLAAVYGPK GT+K ENPEKA
Sbjct: 1 MEESRADGRNPNQLRPFSCTRNPLDRAHGSARWAQGDTIVLAAVYGPKPGTRKGENPEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
SIEV+WKP TGQIGK E+E EM LKRTLQSIC+LT++PNTTTS+I+Q LLPCAI
Sbjct: 61 SIEVVWKPMTGQIGKQEKEYEMTLKRTLQSICLLTVHPNTTTSVILQVVGNDGSLLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NA CAALV AGIPLKHLAVAI C + E G VILD K EEQ++K+F HLVFPNS S
Sbjct: 121 NACCAALVFAGIPLKHLAVAIGCGVLEDGEVILDTNKAEEQQLKSFAHLVFPNSRKSASS 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPAD 232
K Q +E E G+ITS+T G MS +DY C+ERG AA++++SDF+R +LQ Q P D
Sbjct: 181 KEPNQ-KEEDSERGLITSITHGVMSEEDYFSCIERGLAASSRISDFMRTTLQKQAPGD 237
BLAST of MS001214 vs. ExPASy Swiss-Prot
Match:
Q9NQT4 (Exosome complex component RRP46 OS=Homo sapiens OX=9606 GN=EXOSC5 PE=1 SV=1)
HSP 1 Score: 129.4 bits (324), Expect = 5.3e-29
Identity = 76/219 (34.70%), Postives = 119/219 (54.34%), Query Frame = 0
Query: 14 LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQI 73
LR AC N+L+R GSAS+ QGDT VLA VYGP E KA++EVI +PK G
Sbjct: 28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLP 87
Query: 74 GKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAINASCAALVDAGIP 133
G E+ E +++ T +++ + T++P T+ ++++Q LL C +NA+C ALVDAG+P
Sbjct: 88 GVAEKSRERLIRNTCEAVVLGTLHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVP 147
Query: 134 LKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIPKGSTQLVDEPLEH 193
++ L + C L G ++LDPT +E++ +A + + +E
Sbjct: 148 MRALFCGVACALDSDGTLVLDPTSKQEKEARAVLTFAL-----------------DSVER 207
Query: 194 GIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQ 226
++ S T+G S + CL +AA+ + F R SLQ
Sbjct: 208 KLLMSSTKGLYSDTELQQCLAAAQAASQHVFRFYRESLQ 229
BLAST of MS001214 vs. ExPASy Swiss-Prot
Match:
Q9CRA8 (Exosome complex component RRP46 OS=Mus musculus OX=10090 GN=Exosc5 PE=1 SV=1)
HSP 1 Score: 126.7 bits (317), Expect = 3.4e-28
Identity = 75/219 (34.25%), Postives = 118/219 (53.88%), Query Frame = 0
Query: 14 LRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPKTGQI 73
LR AC N+L+R GSAS+ QGDT VLA VYGP E KA++EVI +PK G
Sbjct: 28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLP 87
Query: 74 GKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAINASCAALVDAGIP 133
G E+ E +++ T +++ + ++P T+ ++++Q LL C +NA+C ALVDAG+P
Sbjct: 88 GVAEKSRERLVRNTCEAVVLGALHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVP 147
Query: 134 LKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIPKGSTQLVDEPLEH 193
++ L + C L G ++LDPT +E++ +A + ++ E
Sbjct: 148 MRALFCGVTCALDSDGNLVLDPTTKQEKEARAILTFALDSA-----------------EQ 207
Query: 194 GIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQ 226
++ S T+G S + CL +AA+ + F R SLQ
Sbjct: 208 KLLMSTTKGLYSDAELQQCLAAAQAASQHIFRFYRESLQ 229
BLAST of MS001214 vs. ExPASy Swiss-Prot
Match:
Q4JB27 (Exosome complex component Rrp41 OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=rrp41 PE=3 SV=1)
HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12
Identity = 57/185 (30.81%), Postives = 95/185 (51.35%), Query Frame = 0
Query: 5 RDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKN-ENPEKASIE 64
R DGR ++LRP+ VL A GSA + G+TKV+AAVYGPK ++ P+KAS+
Sbjct: 16 RTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPRHLALPDKASLR 75
Query: 65 VIW--------KPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQLLPC---- 124
V + + K + E E +++ L+S +L + P T I +++L
Sbjct: 76 VRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILLNLFPRTVIDIFMEVLQADAGT 135
Query: 125 ---AINASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSP 174
A+ A+ AL DAGIP++ L + ++ G ++LD + E+ +A + P
Sbjct: 136 RLVALMAASMALADAGIPMRDLIAGVAVGKAD-GSLVLDLNEQEDMWGEA-------DMP 192
BLAST of MS001214 vs. ExPASy TrEMBL
Match:
A0A6J1BU99 (exosome complex exonuclease RRP46 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004823 PE=4 SV=1)
HSP 1 Score: 459.1 bits (1180), Expect = 1.1e-125
Identity = 234/242 (96.69%), Postives = 235/242 (97.11%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ LLPCAI
Sbjct: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQVIHDDGALLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 236
KGSTQ+VDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS
Sbjct: 181 KGSTQVVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 240
BLAST of MS001214 vs. ExPASy TrEMBL
Match:
A0A6J1GI69 (exosome complex exonuclease RRP46 homolog OS=Cucurbita moschata OX=3662 GN=LOC111454378 PE=4 SV=1)
HSP 1 Score: 436.4 bits (1121), Expect = 7.5e-119
Identity = 222/243 (91.36%), Postives = 229/243 (94.24%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1 MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSI+VQ LLPCAI
Sbjct: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NASCAALVDAGIPLKHLAVAI CCLSESGYVILDPTKLEEQKMKA VHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GSTQ+ EPLE+GIITS+TQGAMSVDDYIHCLERGRAATAKMS FLRRSLQPQLP DSS
Sbjct: 181 EGSTQVAGEPLENGIITSLTQGAMSVDDYIHCLERGRAATAKMSAFLRRSLQPQLPTDSS 240
BLAST of MS001214 vs. ExPASy TrEMBL
Match:
A0A6J1KQK5 (exosome complex exonuclease RRP46 homolog OS=Cucurbita maxima OX=3661 GN=LOC111496308 PE=4 SV=1)
HSP 1 Score: 435.3 bits (1118), Expect = 1.7e-118
Identity = 222/243 (91.36%), Postives = 229/243 (94.24%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTK+LAAVYGPKAGTKKNENPEKA
Sbjct: 1 MEIDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKILAAVYGPKAGTKKNENPEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSI+VQ LLPCAI
Sbjct: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIVVQVIHDDGALLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NASCAALVDAGIPLKHLAVAI CCLSESGYVILDPTKLEEQKMKA VHLVFPNSPVSVIP
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSESGYVILDPTKLEEQKMKASVHLVFPNSPVSVIP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GSTQ+ EPLE+GIITS+TQGAMSVDDYIHCLERGRAATAKMS FLRRSLQPQLP DSS
Sbjct: 181 EGSTQVGGEPLENGIITSLTQGAMSVDDYIHCLERGRAATAKMSAFLRRSLQPQLPTDSS 240
BLAST of MS001214 vs. ExPASy TrEMBL
Match:
A0A0A0LLJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374620 PE=4 SV=1)
HSP 1 Score: 429.9 bits (1104), Expect = 7.0e-117
Identity = 219/243 (90.12%), Postives = 227/243 (93.42%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1 MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
SIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNTTTSIIVQ LLPCAI
Sbjct: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NASCAALVDAGIPLKHLAVAI CCLSE+GYVILDPTK+EE+KMKA VHLVFPN+PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNAPVSVVP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GSTQ V EPLEHGIITSVTQGAMSVDDYIHCLERGRAAT KMS FLRRSLQPQLP +SS
Sbjct: 181 EGSTQGVGEPLEHGIITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLPMNSS 240
BLAST of MS001214 vs. ExPASy TrEMBL
Match:
A0A5A7VGL5 (Exosome complex exonuclease RRP46-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003630 PE=4 SV=1)
HSP 1 Score: 427.6 bits (1098), Expect = 3.5e-116
Identity = 218/243 (89.71%), Postives = 226/243 (93.00%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DRDDGRT NQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA
Sbjct: 1 MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
SIEVIWKPKTGQIGKLERECEMILKRTLQSICILT NPNTTTSIIVQ LLPCAI
Sbjct: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNTTTSIIVQVIHDDGALLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NASCAALVDAGIPLKHLAVAI CCLSE+GYVILDPTK+EE+KMKA VHLVFPN+PVSV+P
Sbjct: 121 NASCAALVDAGIPLKHLAVAISCCLSENGYVILDPTKIEEEKMKASVHLVFPNTPVSVVP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GSTQ V EPLEHG+ITSVTQGAMSVDDYIHCLERGRAAT KMS FLRRSLQPQL DSS
Sbjct: 181 EGSTQGVGEPLEHGMITSVTQGAMSVDDYIHCLERGRAATTKMSAFLRRSLQPQLSMDSS 240
BLAST of MS001214 vs. TAIR 10
Match:
AT3G46210.1 (Ribosomal protein S5 domain 2-like superfamily protein )
HSP 1 Score: 353.2 bits (905), Expect = 1.6e-97
Identity = 175/243 (72.02%), Postives = 206/243 (84.77%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DR+DGRT NQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNTTTS+I+Q LLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NA+CAALVDAGIP+KHLAVAICCCL+E+GY++LDP KLEE+KM AF +LVFPN+ +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GS+ EP+EHGIITS+T G MSVDDY C+E GRAATA +S F R++ Q SS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQ----QSSS 239
BLAST of MS001214 vs. TAIR 10
Match:
AT3G46210.2 (Ribosomal protein S5 domain 2-like superfamily protein )
HSP 1 Score: 353.2 bits (905), Expect = 1.6e-97
Identity = 175/243 (72.02%), Postives = 206/243 (84.77%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DR+DGRT NQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNTTTS+I+Q LLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NA+CAALVDAGIP+KHLAVAICCCL+E+GY++LDP KLEE+KM AF +LVFPN+ +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GS+ EP+EHGIITS+T G MSVDDY C+E GRAATA +S F R++ Q SS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQ----QSSS 239
BLAST of MS001214 vs. TAIR 10
Match:
AT3G46210.3 (Ribosomal protein S5 domain 2-like superfamily protein )
HSP 1 Score: 353.2 bits (905), Expect = 1.6e-97
Identity = 175/243 (72.02%), Postives = 206/243 (84.77%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DR+DGRT NQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNTTTS+I+Q LLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NA+CAALVDAGIP+KHLAVAICCCL+E+GY++LDP KLEE+KM AF +LVFPN+ +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GS+ EP+EHGIITS+T G MSVDDY C+E GRAATA +S F R++ Q SS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQ----QSSS 239
BLAST of MS001214 vs. TAIR 10
Match:
AT3G46210.4 (Ribosomal protein S5 domain 2-like superfamily protein )
HSP 1 Score: 353.2 bits (905), Expect = 1.6e-97
Identity = 175/243 (72.02%), Postives = 206/243 (84.77%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DR+DGRT NQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNTTTS+I+Q LLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NA+CAALVDAGIP+KHLAVAICCCL+E+GY++LDP KLEE+KM AF +LVFPN+ +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GS+ EP+EHGIITS+T G MSVDDY C+E GRAATA +S F R++ Q SS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQ----QSSS 239
BLAST of MS001214 vs. TAIR 10
Match:
AT3G46210.5 (Ribosomal protein S5 domain 2-like superfamily protein )
HSP 1 Score: 353.2 bits (905), Expect = 1.6e-97
Identity = 175/243 (72.02%), Postives = 206/243 (84.77%), Query Frame = 0
Query: 1 MEMDRDDGRTANQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60
ME+DR+DGRT NQLRPLACS N+L+R HGSASWSQGDTKVLAAVYGPKAGTKKNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 61 SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTINPNTTTSIIVQ-------LLPCAI 120
EVIWKPK+GQIGK+E+E EMILKRT+QSIC+LT+NPNTTTS+I+Q LLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 121 NASCAALVDAGIPLKHLAVAICCCLSESGYVILDPTKLEEQKMKAFVHLVFPNSPVSVIP 180
NA+CAALVDAGIP+KHLAVAICCCL+E+GY++LDP KLEE+KM AF +LVFPN+ +SV+P
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 181 KGSTQLVDEPLEHGIITSVTQGAMSVDDYIHCLERGRAATAKMSDFLRRSLQPQLPADSS 237
+GS+ EP+EHGIITS+T G MSVDDY C+E GRAATA +S F R++ Q SS
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQ----QSSS 239
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022131722.1 | 2.2e-125 | 96.69 | exosome complex exonuclease RRP46 homolog isoform X1 [Momordica charantia] >XP_0... | [more] |
XP_022951618.1 | 1.5e-118 | 91.36 | exosome complex exonuclease RRP46 homolog [Cucurbita moschata] >KAG6585390.1 Exo... | [more] |
XP_023538111.1 | 2.6e-118 | 91.36 | exosome complex exonuclease RRP46 homolog [Cucurbita pepo subsp. pepo] | [more] |
XP_023002484.1 | 3.5e-118 | 91.36 | exosome complex exonuclease RRP46 homolog [Cucurbita maxima] | [more] |
XP_038885208.1 | 1.3e-117 | 91.36 | exosome complex exonuclease RRP46 homolog [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q9LX74 | 2.3e-96 | 72.02 | Exosome complex exonuclease RRP46 homolog OS=Arabidopsis thaliana OX=3702 GN=RRP... | [more] |
Q84T68 | 1.2e-78 | 64.71 | Exosome complex exonuclease RRP46 homolog OS=Oryza sativa subsp. japonica OX=399... | [more] |
Q9NQT4 | 5.3e-29 | 34.70 | Exosome complex component RRP46 OS=Homo sapiens OX=9606 GN=EXOSC5 PE=1 SV=1 | [more] |
Q9CRA8 | 3.4e-28 | 34.25 | Exosome complex component RRP46 OS=Mus musculus OX=10090 GN=Exosc5 PE=1 SV=1 | [more] |
Q4JB27 | 1.2e-12 | 30.81 | Exosome complex component Rrp41 OS=Sulfolobus acidocaldarius (strain ATCC 33909 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BU99 | 1.1e-125 | 96.69 | exosome complex exonuclease RRP46 homolog isoform X1 OS=Momordica charantia OX=3... | [more] |
A0A6J1GI69 | 7.5e-119 | 91.36 | exosome complex exonuclease RRP46 homolog OS=Cucurbita moschata OX=3662 GN=LOC11... | [more] |
A0A6J1KQK5 | 1.7e-118 | 91.36 | exosome complex exonuclease RRP46 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114... | [more] |
A0A0A0LLJ9 | 7.0e-117 | 90.12 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374620 PE=4 SV=1 | [more] |
A0A5A7VGL5 | 3.5e-116 | 89.71 | Exosome complex exonuclease RRP46-like protein OS=Cucumis melo var. makuwa OX=11... | [more] |
Match Name | E-value | Identity | Description | |
AT3G46210.1 | 1.6e-97 | 72.02 | Ribosomal protein S5 domain 2-like superfamily protein | [more] |
AT3G46210.2 | 1.6e-97 | 72.02 | Ribosomal protein S5 domain 2-like superfamily protein | [more] |
AT3G46210.3 | 1.6e-97 | 72.02 | Ribosomal protein S5 domain 2-like superfamily protein | [more] |
AT3G46210.4 | 1.6e-97 | 72.02 | Ribosomal protein S5 domain 2-like superfamily protein | [more] |
AT3G46210.5 | 1.6e-97 | 72.02 | Ribosomal protein S5 domain 2-like superfamily protein | [more] |