MS001193 (gene) Bitter gourd (TR) v1

Overview
NameMS001193
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionhistidine-containing phosphotransfer protein 4-like
Locationscaffold36: 2190868 .. 2190942 (-)
RNA-Seq ExpressionMS001193
SyntenyMS001193
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCATCAGGAGTTTCCAGCAAGTAAAACAAGAGCATGAAATTCTGAAGAAGAAGCTTGATACCTATTTCCAGGTT

mRNA sequence

TGCATCAGGAGTTTCCAGCAAGTAAAACAAGAGCATGAAATTCTGAAGAAGAAGCTTGATACCTATTTCCAGGTT

Coding sequence (CDS)

TGCATCAGGAGTTTCCAGCAAGTAAAACAAGAGCATGAAATTCTGAAGAAGAAGCTTGATACCTATTTCCAGGTT

Protein sequence

CIRSFQQVKQEHEILKKKLDTYFQV
Homology
BLAST of MS001193 vs. NCBI nr
Match: XP_008445576.2 (PREDICTED: histidine-containing phosphotransfer protein 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 52.0 bits (123), Expect = 8.7e-04
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 1   CIRSFQQVKQEHEILKKKLDTYFQV 26
           C+RSFQQVKQEHEILKKKLDTYFQV
Sbjct: 113 CMRSFQQVKQEHEILKKKLDTYFQV 137

BLAST of MS001193 vs. NCBI nr
Match: XP_022131357.1 (histidine-containing phosphotransfer protein 4-like isoform X2 [Momordica charantia])

HSP 1 Score: 52.0 bits (123), Expect = 8.7e-04
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 1   CIRSFQQVKQEHEILKKKLDTYFQV 26
           CIRSFQQVKQEHEILKKKLDTYFQ+
Sbjct: 105 CIRSFQQVKQEHEILKKKLDTYFQL 129

BLAST of MS001193 vs. NCBI nr
Match: XP_022131353.1 (histidine-containing phosphotransfer protein 4-like isoform X1 [Momordica charantia] >XP_022131354.1 histidine-containing phosphotransfer protein 4-like isoform X1 [Momordica charantia] >XP_022131355.1 histidine-containing phosphotransfer protein 4-like isoform X1 [Momordica charantia] >XP_022131356.1 histidine-containing phosphotransfer protein 4-like isoform X1 [Momordica charantia])

HSP 1 Score: 52.0 bits (123), Expect = 8.7e-04
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 1   CIRSFQQVKQEHEILKKKLDTYFQV 26
           CIRSFQQVKQEHEILKKKLDTYFQ+
Sbjct: 140 CIRSFQQVKQEHEILKKKLDTYFQL 164

BLAST of MS001193 vs. NCBI nr
Match: XP_016899933.1 (PREDICTED: histidine-containing phosphotransfer protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 52.0 bits (123), Expect = 8.7e-04
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 1   CIRSFQQVKQEHEILKKKLDTYFQV 26
           C+RSFQQVKQEHEILKKKLDTYFQV
Sbjct: 90  CMRSFQQVKQEHEILKKKLDTYFQV 114

BLAST of MS001193 vs. ExPASy TrEMBL
Match: A0A6J1BPH2 (histidine-containing phosphotransfer protein 4-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004602 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.2e-04
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 1   CIRSFQQVKQEHEILKKKLDTYFQV 26
           CIRSFQQVKQEHEILKKKLDTYFQ+
Sbjct: 140 CIRSFQQVKQEHEILKKKLDTYFQL 164

BLAST of MS001193 vs. ExPASy TrEMBL
Match: A0A6J1BQS8 (histidine-containing phosphotransfer protein 4-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111004602 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.2e-04
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 1   CIRSFQQVKQEHEILKKKLDTYFQV 26
           CIRSFQQVKQEHEILKKKLDTYFQ+
Sbjct: 105 CIRSFQQVKQEHEILKKKLDTYFQL 129

BLAST of MS001193 vs. ExPASy TrEMBL
Match: A0A1S3BD23 (histidine-containing phosphotransfer protein 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488557 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.2e-04
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 1   CIRSFQQVKQEHEILKKKLDTYFQV 26
           C+RSFQQVKQEHEILKKKLDTYFQV
Sbjct: 113 CMRSFQQVKQEHEILKKKLDTYFQV 137

BLAST of MS001193 vs. ExPASy TrEMBL
Match: A0A1S4DVD6 (histidine-containing phosphotransfer protein 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488557 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.2e-04
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 1   CIRSFQQVKQEHEILKKKLDTYFQV 26
           C+RSFQQVKQEHEILKKKLDTYFQV
Sbjct: 90  CMRSFQQVKQEHEILKKKLDTYFQV 114

BLAST of MS001193 vs. ExPASy TrEMBL
Match: A0A6J1KJT4 (histidine-containing phosphotransfer protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111496354 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 9.4e-04
Identity = 23/25 (92.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 1   CIRSFQQVKQEHEILKKKLDTYFQV 26
           CIRSFQ+VKQEHEILKKKLDTYFQ+
Sbjct: 113 CIRSFQEVKQEHEILKKKLDTYFQL 137

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008445576.28.7e-0496.00PREDICTED: histidine-containing phosphotransfer protein 4-like isoform X1 [Cucum... [more]
XP_022131357.18.7e-0496.00histidine-containing phosphotransfer protein 4-like isoform X2 [Momordica charan... [more]
XP_022131353.18.7e-0496.00histidine-containing phosphotransfer protein 4-like isoform X1 [Momordica charan... [more]
XP_016899933.18.7e-0496.00PREDICTED: histidine-containing phosphotransfer protein 4-like isoform X2 [Cucum... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1BPH24.2e-0496.00histidine-containing phosphotransfer protein 4-like isoform X1 OS=Momordica char... [more]
A0A6J1BQS84.2e-0496.00histidine-containing phosphotransfer protein 4-like isoform X2 OS=Momordica char... [more]
A0A1S3BD234.2e-0496.00histidine-containing phosphotransfer protein 4-like isoform X1 OS=Cucumis melo O... [more]
A0A1S4DVD64.2e-0496.00histidine-containing phosphotransfer protein 4-like isoform X2 OS=Cucumis melo O... [more]
A0A6J1KJT49.4e-0492.00histidine-containing phosphotransfer protein 4-like OS=Cucurbita maxima OX=3661 ... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS001193.1MS001193.1mRNA