MS001111 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATTTACAGCGGCGAAGGCCTTGGATTTCCACCTCTTCCTGATCTTCCTCGTCAGGTTCCTTGGTAACTCCAATCTAATATATGTTTCATATAACATAACGAATGTCTATTATAAGTCTCTTATATTTTAACATTGGATTTTGCAGGCCCTTGTGGATGCTTGGGATGCTAATATCCGCAATTTTACCGTTTTGGGGTAATAAATTGTGGCCTTTTCTGATATTAAAGCGTAAGTTTCTCTTCTTCATTTTCTGCAAAATTATTATAAAAAGAGAGAAAAAAAGGTTCCGATTCGGCCGATACATGATATGATGGATAGAGAACGTAGACAAAGTGGTGGATGCGGTGGAGGAAGTGGCAGAAATGGTGGAGACGGCGGCGGAGGGAGTGGAGAAGGTGGCGGAAGAGGTCGCCGAACATCTCCCACAAGGCGGCCAACTCCAGAAAGCTGCACTTTTCGTGGAAAATGCAGCCAAAACCCTTTCCAAGGACGCCCATGTTGCAGAACAAATCGTCCACAAGGTC ATGGCCATTTACAGCGGCGAAGGCCTTGGATTTCCACCTCTTCCTGATCTTCCTCGTCAGGTTCCTTGGCCCTTGTGGATGCTTGGGATGCTAATATCCGCAATTTTACCGTTTTGGGGTAATAAATTGTGGCCTTTTCTGATATTAAAGCAGAACGTAGACAAAGTGGTGGATGCGGTGGAGGAAGTGGCAGAAATGGTGGAGACGGCGGCGGAGGGAGTGGAGAAGGTGGCGGAAGAGGTCGCCGAACATCTCCCACAAGGCGGCCAACTCCAGAAAGCTGCACTTTTCGTGGAAAATGCAGCCAAAACCCTTTCCAAGGACGCCCATGTTGCAGAACAAATCGTCCACAAGGTC ATGGCCATTTACAGCGGCGAAGGCCTTGGATTTCCACCTCTTCCTGATCTTCCTCGTCAGGTTCCTTGGCCCTTGTGGATGCTTGGGATGCTAATATCCGCAATTTTACCGTTTTGGGGTAATAAATTGTGGCCTTTTCTGATATTAAAGCAGAACGTAGACAAAGTGGTGGATGCGGTGGAGGAAGTGGCAGAAATGGTGGAGACGGCGGCGGAGGGAGTGGAGAAGGTGGCGGAAGAGGTCGCCGAACATCTCCCACAAGGCGGCCAACTCCAGAAAGCTGCACTTTTCGTGGAAAATGCAGCCAAAACCCTTTCCAAGGACGCCCATGTTGCAGAACAAATCGTCCACAAGGTC MAIYSGEGLGFPPLPDLPRQVPWPLWMLGMLISAILPFWGNKLWPFLILKQNVDKVVDAVEEVAEMVETAAEGVEKVAEEVAEHLPQGGQLQKAALFVENAAKTLSKDAHVAEQIVHKV Homology
BLAST of MS001111 vs. NCBI nr
Match: XP_022132223.1 (uncharacterized protein LOC111005138 [Momordica charantia]) HSP 1 Score: 225.3 bits (573), Expect = 2.7e-55 Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of MS001111 vs. NCBI nr
Match: XP_038886507.1 (uncharacterized protein LOC120076681 isoform X3 [Benincasa hispida] >XP_038886572.1 uncharacterized protein LOC120076742 isoform X2 [Benincasa hispida]) HSP 1 Score: 147.1 bits (370), Expect = 9.5e-32 Identity = 80/122 (65.57%), Postives = 96/122 (78.69%), Query Frame = 0
BLAST of MS001111 vs. NCBI nr
Match: XP_038886505.1 (uncharacterized protein LOC120076681 isoform X1 [Benincasa hispida]) HSP 1 Score: 146.0 bits (367), Expect = 2.1e-31 Identity = 79/122 (64.75%), Postives = 96/122 (78.69%), Query Frame = 0
BLAST of MS001111 vs. NCBI nr
Match: XP_038886506.1 (uncharacterized protein LOC120076681 isoform X2 [Benincasa hispida] >XP_038886571.1 uncharacterized protein LOC120076742 isoform X1 [Benincasa hispida]) HSP 1 Score: 145.6 bits (366), Expect = 2.8e-31 Identity = 79/121 (65.29%), Postives = 95/121 (78.51%), Query Frame = 0
BLAST of MS001111 vs. NCBI nr
Match: XP_023546969.1 (uncharacterized protein LOC111805911 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 125.2 bits (313), Expect = 3.9e-25 Identity = 70/124 (56.45%), Postives = 90/124 (72.58%), Query Frame = 0
BLAST of MS001111 vs. ExPASy TrEMBL
Match: A0A6J1BVN6 (uncharacterized protein LOC111005138 OS=Momordica charantia OX=3673 GN=LOC111005138 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55 Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of MS001111 vs. ExPASy TrEMBL
Match: A0A6A6LE81 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_002908 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 2.1e-24 Identity = 58/108 (53.70%), Postives = 78/108 (72.22%), Query Frame = 0
BLAST of MS001111 vs. ExPASy TrEMBL
Match: A0A6J1HCK6 (uncharacterized protein LOC111462754 OS=Cucurbita moschata OX=3662 GN=LOC111462754 PE=4 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.7e-24 Identity = 70/124 (56.45%), Postives = 90/124 (72.58%), Query Frame = 0
BLAST of MS001111 vs. ExPASy TrEMBL
Match: A0A067LA97 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_15837 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 7.8e-24 Identity = 60/118 (50.85%), Postives = 80/118 (67.80%), Query Frame = 0
BLAST of MS001111 vs. ExPASy TrEMBL
Match: A0A6J1K717 (uncharacterized protein LOC111492223 OS=Cucurbita maxima OX=3661 GN=LOC111492223 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 8.7e-23 Identity = 64/127 (50.39%), Postives = 86/127 (67.72%), Query Frame = 0
BLAST of MS001111 vs. TAIR 10
Match: AT2G14095.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 106 Blast hits to 103 proteins in 21 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 4; Plants - 87; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 70.5 bits (171), Expect = 1.0e-12 Identity = 37/98 (37.76%), Postives = 62/98 (63.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|