Homology
BLAST of MS001083 vs. NCBI nr
Match:
XP_022131916.1 (serine/arginine-rich splicing factor SC35-like [Momordica charantia])
HSP 1 Score: 456.8 bits (1174), Expect = 1.2e-124
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR 120
FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR 120
Query: 121 SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERERHRSRSRSASPDRNKDRRRGRDD 180
SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERERHRSRSRSASPDRNKDRRRGRDD
Sbjct: 121 SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERERHRSRSRSASPDRNKDRRRGRDD 180
Query: 181 DERRSISNSDRSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGSPLSPKLVDSRS 240
DERRSISNSDRSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGSPLSPKLVDSRS
Sbjct: 181 DERRSISNSDRSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGSPLSPKLVDSRS 240
Query: 241 PSPAKSDAD 250
PSPAKSDAD
Sbjct: 241 PSPAKSDAD 249
BLAST of MS001083 vs. NCBI nr
Match:
KAA0064834.1 (serine/arginine-rich splicing factor SC35-like [Cucumis melo var. makuwa])
HSP 1 Score: 402.9 bits (1034), Expect = 2.0e-108
Identity = 230/253 (90.91%), Postives = 240/253 (94.86%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR 120
FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSK RGRSRSR
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKTRGRSRSR 120
Query: 121 SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHR-ERERHRSRSRSASPDRNKDRRRGRD 180
SPRSRHRDDYRDRD+RRRSRSRSR+RYDRDRPHR ERER+RSRSRSASPDR+KDRRRGRD
Sbjct: 121 SPRSRHRDDYRDRDYRRRSRSRSRERYDRDRPHRSERERYRSRSRSASPDRSKDRRRGRD 180
Query: 181 DDERRSISNSDRSMSPTRRSPNTRRSISPRRS-PSRSRSDDGLSPKRENGSPLSPKLVDS 240
DDERRS S+SDRSMSPTR SP+TRRSISPRR+ PSR RSD+ SPK +NGSP K VDS
Sbjct: 181 DDERRSASHSDRSMSPTRHSPDTRRSISPRRTPPSRGRSDNERSPKGDNGSP-DDKPVDS 240
Query: 241 RSPSPAKSDADVS 252
RSPSPA+SDADVS
Sbjct: 241 RSPSPARSDADVS 252
BLAST of MS001083 vs. NCBI nr
Match:
XP_008445340.1 (PREDICTED: serine/arginine-rich splicing factor SC35-like [Cucumis melo])
HSP 1 Score: 399.8 bits (1026), Expect = 1.7e-107
Identity = 228/251 (90.84%), Postives = 238/251 (94.82%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR 120
FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSK RGRSRSR
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKTRGRSRSR 120
Query: 121 SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHR-ERERHRSRSRSASPDRNKDRRRGRD 180
SPRSRHRDDYRDRD+RRRSRSRSR+RYDRDRPHR ERER+RSRSRSASPDR+KDRRRGRD
Sbjct: 121 SPRSRHRDDYRDRDYRRRSRSRSRERYDRDRPHRSERERYRSRSRSASPDRSKDRRRGRD 180
Query: 181 DDERRSISNSDRSMSPTRRSPNTRRSISPRRS-PSRSRSDDGLSPKRENGSPLSPKLVDS 240
DDERRS S+SDRSMSPTR SP+TRRSISPRR+ PSR RSD+ SPK +NGSP K VDS
Sbjct: 181 DDERRSASHSDRSMSPTRHSPDTRRSISPRRTPPSRGRSDNERSPKGDNGSP-DDKPVDS 240
Query: 241 RSPSPAKSDAD 250
RSPSPA+SDAD
Sbjct: 241 RSPSPARSDAD 250
BLAST of MS001083 vs. NCBI nr
Match:
XP_011649457.1 (serine/arginine-rich splicing factor SC35 isoform X2 [Cucumis sativus])
HSP 1 Score: 398.7 bits (1023), Expect = 3.8e-107
Identity = 227/251 (90.44%), Postives = 239/251 (95.22%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR 120
FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSK RGRSRSR
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKTRGRSRSR 120
Query: 121 SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHR-ERERHRSRSRSASPDRNKDRRRGRD 180
SPRSRHRDD+RDRD+RRRSRSRSR+RYDRDRPHR ERER+RSRSRSASPDR+KDRRRGRD
Sbjct: 121 SPRSRHRDDHRDRDYRRRSRSRSRERYDRDRPHRSERERYRSRSRSASPDRSKDRRRGRD 180
Query: 181 DDERRSISNSDRSMSPTRRSPNTRRSISPRRS-PSRSRSDDGLSPKRENGSPLSPKLVDS 240
DDERRS S+SDRSMSPTR SP+TRRSISPR++ PSR+RSDD SPK +NGSP K VDS
Sbjct: 181 DDERRSASHSDRSMSPTRHSPDTRRSISPRKTPPSRARSDDEHSPKGDNGSP-DDKPVDS 240
Query: 241 RSPSPAKSDAD 250
RSPSPA+SDAD
Sbjct: 241 RSPSPARSDAD 250
BLAST of MS001083 vs. NCBI nr
Match:
XP_038884086.1 (serine/arginine-rich splicing factor SC35-like [Benincasa hispida])
HSP 1 Score: 395.2 bits (1014), Expect = 4.2e-106
Identity = 227/251 (90.44%), Postives = 236/251 (94.02%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR 120
FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSK RGRSRSR
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKTRGRSRSR 120
Query: 121 SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHR-ERERHRSRSRSASPDRNKDRRRGRD 180
SPRSRHRDD RDRD+RRRSRSRSR+RYDRDRPHR ERER+RSRSRSASPDR+KDRRRGRD
Sbjct: 121 SPRSRHRDDPRDRDYRRRSRSRSRERYDRDRPHRSERERYRSRSRSASPDRSKDRRRGRD 180
Query: 181 DDERRSISNSDRSMSPTRRSPNTRRSISPRRS-PSRSRSDDGLSPKRENGSPLSPKLVDS 240
DDERRS S+SDRSMSPTRRSP+TRRSISPRR+ P R RSDD SP R+NGS K VDS
Sbjct: 181 DDERRSASHSDRSMSPTRRSPDTRRSISPRRTPPPRGRSDDEHSPSRDNGSS-DDKPVDS 240
Query: 241 RSPSPAKSDAD 250
RSPSPA+SDAD
Sbjct: 241 RSPSPARSDAD 250
BLAST of MS001083 vs. ExPASy Swiss-Prot
Match:
Q9FMG4 (Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana OX=3702 GN=SC35 PE=1 SV=1)
HSP 1 Score: 246.1 bits (627), Expect = 4.1e-64
Identity = 173/283 (61.13%), Postives = 192/283 (67.84%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DTYSLLVLNITFRTTADDLYPLF KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVME------------ 120
FVRYKY DEA KA+++LDGR++DGREI VQFAKYGPNAEKI KGRV+E
Sbjct: 61 FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRS 120
Query: 121 ---------SSSKPRGRS--RSRSPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERE 180
S S PR RS RSRSPR R RDDYR++D+R+RSRSRS DR +R
Sbjct: 121 PRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEKDRDH 180
Query: 181 RHRSRSRSASPDRNKDRRRGRDDDERRSISNSDRSMSPTRRSPNT--------RRSISP- 240
R R+RSRSASPD K R RGR D+E RS S S S SP RRSP + R +SP
Sbjct: 181 RRRTRSRSASPD-EKRRVRGRYDNESRSHSRS-LSASPARRSPRSSSPQKTSPAREVSPD 240
Query: 241 ----RRSPSRSRSDDGLSPKRENGSP---LSP-KLVDSRSPSP 244
RSPS RS SP + SP +SP + + RSPSP
Sbjct: 241 KRSNERSPSPRRSLSPRSPALQKASPSKEMSPERRSNERSPSP 281
BLAST of MS001083 vs. ExPASy Swiss-Prot
Match:
P30352 (Serine/arginine-rich splicing factor 2 OS=Gallus gallus OX=9031 GN=SRSF2 PE=2 SV=1)
HSP 1 Score: 120.2 bits (300), Expect = 3.4e-26
Identity = 104/228 (45.61%), Postives = 131/228 (57.46%), Query Frame = 0
Query: 4 FGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V DV+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 62
Query: 64 YKYADEAQKAIDKLDGRMLDGREIMVQFAKYG--PNAEKIRKGRVMESSSKPRGRSRSRS 123
+ +A+ A+D +DG +LDGRE+ VQ A+YG P++ R+G RSRS
Sbjct: 63 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGSSGYGRRSRS 122
Query: 124 PRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERERHRSRSRSASPDRNKDRRRGRDDD 183
PR R R R R RSRSRSR RY R + R R RSRSRS S R+ R + +
Sbjct: 123 PRRRRRSRSRSRS---RSRSRSRSRYSRS---KSRSRTRSRSRSTSKSRSARRSKSKSSS 182
Query: 184 ERRSISNSDRSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGS 230
RS S S RS S +R P T S R S SRSRS E G+
Sbjct: 183 VSRSRSRS-RSRSRSRSPPPT----SKRESNSRSRSKSPPKSPEEEGA 218
BLAST of MS001083 vs. ExPASy Swiss-Prot
Match:
Q3MHR5 (Serine/arginine-rich splicing factor 2 OS=Bos taurus OX=9913 GN=SRSF2 PE=2 SV=3)
HSP 1 Score: 119.8 bits (299), Expect = 4.5e-26
Identity = 103/228 (45.18%), Postives = 131/228 (57.46%), Query Frame = 0
Query: 4 FGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V DV+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 62
Query: 64 YKYADEAQKAIDKLDGRMLDGREIMVQFAKYG--PNAEKIRKGRVMESSSKPRGRSRSRS 123
+ +A+ A+D +DG +LDGRE+ VQ A+YG P++ R+G RSRS
Sbjct: 63 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRS 122
Query: 124 PRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERERHRSRSRSASPDRNKDRRRGRDDD 183
PR R R R R RSRSRSR RY R + R R RSRSRS S R+ R + +
Sbjct: 123 PRRRRRSRSRSRS---RSRSRSRSRYSRS---KSRSRTRSRSRSTSKSRSARRSKSKSSS 182
Query: 184 ERRSISNSDRSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGS 230
RS S S RS S +R P +S R S SRSRS E G+
Sbjct: 183 VSRSRSRS-RSRSRSRSPP----PVSKRESKSRSRSKSPPKSPEEEGA 218
BLAST of MS001083 vs. ExPASy Swiss-Prot
Match:
Q01130 (Serine/arginine-rich splicing factor 2 OS=Homo sapiens OX=9606 GN=SRSF2 PE=1 SV=4)
HSP 1 Score: 119.8 bits (299), Expect = 4.5e-26
Identity = 103/228 (45.18%), Postives = 131/228 (57.46%), Query Frame = 0
Query: 4 FGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V DV+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 62
Query: 64 YKYADEAQKAIDKLDGRMLDGREIMVQFAKYG--PNAEKIRKGRVMESSSKPRGRSRSRS 123
+ +A+ A+D +DG +LDGRE+ VQ A+YG P++ R+G RSRS
Sbjct: 63 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRS 122
Query: 124 PRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERERHRSRSRSASPDRNKDRRRGRDDD 183
PR R R R R RSRSRSR RY R + R R RSRSRS S R+ R + +
Sbjct: 123 PRRRRRSRSRSRS---RSRSRSRSRYSRS---KSRSRTRSRSRSTSKSRSARRSKSKSSS 182
Query: 184 ERRSISNSDRSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGS 230
RS S S RS S +R P +S R S SRSRS E G+
Sbjct: 183 VSRSRSRS-RSRSRSRSPP----PVSKRESKSRSRSKSPPKSPEEEGA 218
BLAST of MS001083 vs. ExPASy Swiss-Prot
Match:
Q62093 (Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=1 SV=4)
HSP 1 Score: 119.8 bits (299), Expect = 4.5e-26
Identity = 103/228 (45.18%), Postives = 131/228 (57.46%), Query Frame = 0
Query: 4 FGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVR 63
+GR PPD+ SL V N+T+RT+ D L +F+KYG+V DV+IPRDR T +SRGFAFVR
Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 62
Query: 64 YKYADEAQKAIDKLDGRMLDGREIMVQFAKYG--PNAEKIRKGRVMESSSKPRGRSRSRS 123
+ +A+ A+D +DG +LDGRE+ VQ A+YG P++ R+G RSRS
Sbjct: 63 FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRS 122
Query: 124 PRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERERHRSRSRSASPDRNKDRRRGRDDD 183
PR R R R R RSRSRSR RY R + R R RSRSRS S R+ R + +
Sbjct: 123 PRRRRRSRSRSRS---RSRSRSRSRYSRS---KSRSRTRSRSRSTSKSRSARRSKSKSSS 182
Query: 184 ERRSISNSDRSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGS 230
RS S S RS S +R P +S R S SRSRS E G+
Sbjct: 183 VSRSRSRS-RSRSRSRSPP----PVSKRESKSRSRSKSPPKSPEEEGA 218
BLAST of MS001083 vs. ExPASy TrEMBL
Match:
A0A6J1BQT1 (serine/arginine-rich splicing factor SC35-like OS=Momordica charantia OX=3673 GN=LOC111004937 PE=4 SV=1)
HSP 1 Score: 456.8 bits (1174), Expect = 5.7e-125
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR 120
FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR 120
Query: 121 SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERERHRSRSRSASPDRNKDRRRGRDD 180
SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERERHRSRSRSASPDRNKDRRRGRDD
Sbjct: 121 SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERERHRSRSRSASPDRNKDRRRGRDD 180
Query: 181 DERRSISNSDRSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGSPLSPKLVDSRS 240
DERRSISNSDRSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGSPLSPKLVDSRS
Sbjct: 181 DERRSISNSDRSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGSPLSPKLVDSRS 240
Query: 241 PSPAKSDAD 250
PSPAKSDAD
Sbjct: 241 PSPAKSDAD 249
BLAST of MS001083 vs. ExPASy TrEMBL
Match:
A0A5A7VC44 (Serine/arginine-rich splicing factor SC35-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001460 PE=4 SV=1)
HSP 1 Score: 402.9 bits (1034), Expect = 9.8e-109
Identity = 230/253 (90.91%), Postives = 240/253 (94.86%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR 120
FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSK RGRSRSR
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKTRGRSRSR 120
Query: 121 SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHR-ERERHRSRSRSASPDRNKDRRRGRD 180
SPRSRHRDDYRDRD+RRRSRSRSR+RYDRDRPHR ERER+RSRSRSASPDR+KDRRRGRD
Sbjct: 121 SPRSRHRDDYRDRDYRRRSRSRSRERYDRDRPHRSERERYRSRSRSASPDRSKDRRRGRD 180
Query: 181 DDERRSISNSDRSMSPTRRSPNTRRSISPRRS-PSRSRSDDGLSPKRENGSPLSPKLVDS 240
DDERRS S+SDRSMSPTR SP+TRRSISPRR+ PSR RSD+ SPK +NGSP K VDS
Sbjct: 181 DDERRSASHSDRSMSPTRHSPDTRRSISPRRTPPSRGRSDNERSPKGDNGSP-DDKPVDS 240
Query: 241 RSPSPAKSDADVS 252
RSPSPA+SDADVS
Sbjct: 241 RSPSPARSDADVS 252
BLAST of MS001083 vs. ExPASy TrEMBL
Match:
A0A1S3BCG4 (serine/arginine-rich splicing factor SC35-like OS=Cucumis melo OX=3656 GN=LOC103488401 PE=4 SV=1)
HSP 1 Score: 399.8 bits (1026), Expect = 8.3e-108
Identity = 228/251 (90.84%), Postives = 238/251 (94.82%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR 120
FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSK RGRSRSR
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKTRGRSRSR 120
Query: 121 SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHR-ERERHRSRSRSASPDRNKDRRRGRD 180
SPRSRHRDDYRDRD+RRRSRSRSR+RYDRDRPHR ERER+RSRSRSASPDR+KDRRRGRD
Sbjct: 121 SPRSRHRDDYRDRDYRRRSRSRSRERYDRDRPHRSERERYRSRSRSASPDRSKDRRRGRD 180
Query: 181 DDERRSISNSDRSMSPTRRSPNTRRSISPRRS-PSRSRSDDGLSPKRENGSPLSPKLVDS 240
DDERRS S+SDRSMSPTR SP+TRRSISPRR+ PSR RSD+ SPK +NGSP K VDS
Sbjct: 181 DDERRSASHSDRSMSPTRHSPDTRRSISPRRTPPSRGRSDNERSPKGDNGSP-DDKPVDS 240
Query: 241 RSPSPAKSDAD 250
RSPSPA+SDAD
Sbjct: 241 RSPSPARSDAD 250
BLAST of MS001083 vs. ExPASy TrEMBL
Match:
A0A0A0LQG4 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G345920 PE=4 SV=1)
HSP 1 Score: 398.7 bits (1023), Expect = 1.8e-107
Identity = 227/251 (90.44%), Postives = 239/251 (95.22%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRGRSRSR 120
FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSK RGRSRSR
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKTRGRSRSR 120
Query: 121 SPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHR-ERERHRSRSRSASPDRNKDRRRGRD 180
SPRSRHRDD+RDRD+RRRSRSRSR+RYDRDRPHR ERER+RSRSRSASPDR+KDRRRGRD
Sbjct: 121 SPRSRHRDDHRDRDYRRRSRSRSRERYDRDRPHRSERERYRSRSRSASPDRSKDRRRGRD 180
Query: 181 DDERRSISNSDRSMSPTRRSPNTRRSISPRRS-PSRSRSDDGLSPKRENGSPLSPKLVDS 240
DDERRS S+SDRSMSPTR SP+TRRSISPR++ PSR+RSDD SPK +NGSP K VDS
Sbjct: 181 DDERRSASHSDRSMSPTRHSPDTRRSISPRKTPPSRARSDDEHSPKGDNGSP-DDKPVDS 240
Query: 241 RSPSPAKSDAD 250
RSPSPA+SDAD
Sbjct: 241 RSPSPARSDAD 250
BLAST of MS001083 vs. ExPASy TrEMBL
Match:
A0A6J1GJ79 (serine/arginine-rich splicing factor SC35-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454726 PE=4 SV=1)
HSP 1 Score: 393.7 bits (1010), Expect = 5.9e-106
Identity = 229/253 (90.51%), Postives = 236/253 (93.28%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVME-SSSKPRGRSRS 120
FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKG+VME SSSK RGRSRS
Sbjct: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGKVMESSSSKTRGRSRS 120
Query: 121 RSPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHR-ERERHRSRSRSASPDRNKDRRRGR 180
RSPR RHRDDYRDRD+RRRSRSRSR+RYDRDRPHR ERERHRSRSRSASPD NKDRRR R
Sbjct: 121 RSPRPRHRDDYRDRDYRRRSRSRSRERYDRDRPHRSERERHRSRSRSASPDCNKDRRRER 180
Query: 181 DDDERRSISNSDRSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGSPLSPKLVDS 240
DDERRS S SDRSMSPTR SP+TRRSISPRR+PSR RSDD SP+RENGS L K V+S
Sbjct: 181 -DDERRSASRSDRSMSPTRHSPDTRRSISPRRTPSRGRSDDEHSPQRENGS-LDDKPVNS 240
Query: 241 RSPSPAKSDADVS 252
RSPSPAKSDADVS
Sbjct: 241 RSPSPAKSDADVS 251
BLAST of MS001083 vs. TAIR 10
Match:
AT5G64200.1 (ortholog of human splicing factor SC35 )
HSP 1 Score: 246.1 bits (627), Expect = 2.9e-65
Identity = 173/283 (61.13%), Postives = 192/283 (67.84%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DTYSLLVLNITFRTTADDLYPLF KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVME------------ 120
FVRYKY DEA KA+++LDGR++DGREI VQFAKYGPNAEKI KGRV+E
Sbjct: 61 FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRS 120
Query: 121 ---------SSSKPRGRS--RSRSPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERE 180
S S PR RS RSRSPR R RDDYR++D+R+RSRSRS DR +R
Sbjct: 121 PRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEKDRDH 180
Query: 181 RHRSRSRSASPDRNKDRRRGRDDDERRSISNSDRSMSPTRRSPNT--------RRSISP- 240
R R+RSRSASPD K R RGR D+E RS S S S SP RRSP + R +SP
Sbjct: 181 RRRTRSRSASPD-EKRRVRGRYDNESRSHSRS-LSASPARRSPRSSSPQKTSPAREVSPD 240
Query: 241 ----RRSPSRSRSDDGLSPKRENGSP---LSP-KLVDSRSPSP 244
RSPS RS SP + SP +SP + + RSPSP
Sbjct: 241 KRSNERSPSPRRSLSPRSPALQKASPSKEMSPERRSNERSPSP 281
BLAST of MS001083 vs. TAIR 10
Match:
AT5G64200.2 (ortholog of human splicing factor SC35 )
HSP 1 Score: 246.1 bits (627), Expect = 2.9e-65
Identity = 173/283 (61.13%), Postives = 192/283 (67.84%), Query Frame = 0
Query: 1 MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFA 60
MSHFGRSGPPDI DTYSLLVLNITFRTTADDLYPLF KYGKVVDVFIPRDRRTGDSRGFA
Sbjct: 1 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60
Query: 61 FVRYKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVME------------ 120
FVRYKY DEA KA+++LDGR++DGREI VQFAKYGPNAEKI KGRV+E
Sbjct: 61 FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRS 120
Query: 121 ---------SSSKPRGRS--RSRSPRSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERE 180
S S PR RS RSRSPR R RDDYR++D+R+RSRSRS DR +R
Sbjct: 121 PRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEKDRDH 180
Query: 181 RHRSRSRSASPDRNKDRRRGRDDDERRSISNSDRSMSPTRRSPNT--------RRSISP- 240
R R+RSRSASPD K R RGR D+E RS S S S SP RRSP + R +SP
Sbjct: 181 RRRTRSRSASPD-EKRRVRGRYDNESRSHSRS-LSASPARRSPRSSSPQKTSPAREVSPD 240
Query: 241 ----RRSPSRSRSDDGLSPKRENGSP---LSP-KLVDSRSPSP 244
RSPS RS SP + SP +SP + + RSPSP
Sbjct: 241 KRSNERSPSPRRSLSPRSPALQKASPSKEMSPERRSNERSPSP 281
BLAST of MS001083 vs. TAIR 10
Match:
AT1G55310.1 (SC35-like splicing factor 33 )
HSP 1 Score: 74.3 bits (181), Expect = 1.5e-13
Identity = 100/247 (40.49%), Postives = 125/247 (50.61%), Query Frame = 0
Query: 17 SLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDK 76
SLLV N+ +DL F+++G V D+++PRD TGD RGF FV++ +A A
Sbjct: 37 SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHH 96
Query: 77 LDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESS---------SKPRGRSRSRSP----- 136
+DG +L GRE+ V FA+ N +K + R E + PR SRSRSP
Sbjct: 97 MDGYLLLGRELTVVFAE--ENRKKPTEMRARERGGGRFRDRRRTPPRYYSRSRSPPPRRG 156
Query: 137 --RSRHRDDYR--DRDHRRRSRSRSRDRYDRDRPH-RERERHRSRSRSASPDRNKDRRRG 196
RSR D Y R H RS S +RYD R + R SR RS +P R K R
Sbjct: 157 RSRSRSGDYYSPPPRRHHPRSISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKS--RS 216
Query: 197 RDDDERRSISNSD-RSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGSPLSPKLV 244
RRSIS S RS SP SP RS+SPRRS SRS SP+R S +P+
Sbjct: 217 LSPSPRRSISRSPRRSRSP---SPKRNRSVSPRRSISRS-PRRSRSPRRSRRS-YTPEPA 274
BLAST of MS001083 vs. TAIR 10
Match:
AT3G13570.1 (SC35-like splicing factor 30A )
HSP 1 Score: 63.2 bits (152), Expect = 3.5e-10
Identity = 85/245 (34.69%), Postives = 116/245 (47.35%), Query Frame = 0
Query: 4 FGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVR 63
FG S D+ SLLV N+ +DL F+++G V D+++PRD TGD RGF F++
Sbjct: 27 FGGSRDSDL--PTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQ 86
Query: 64 YKYADEAQKAIDKLDGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKP-RGRSRSRSP 123
+ +A +A ++DG +L GRE+ V FA+ E+ KP R+R R
Sbjct: 87 FMDPADAAEAKHQMDGYLLLGRELTVVFAE--------------ENRKKPTEMRTRDRGG 146
Query: 124 RSRHRDDYRDRDHRRRSRSRSRDRYDRDRPHRERERHRSRSRS-ASPDRNKDRRRGRDDD 183
RS +R + R RS RY R P R R RSRSR SP + + R
Sbjct: 147 RS----------NRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNSPPAKRHQSRSVSPQ 206
Query: 184 ERRSISNSDRSMSPTRRSPNTRRSISPRRSPSRSRSDDGLSPKRENGSPLSPKLVDSRSP 243
+RR S SP RS SP R S SRS R+N S +P+ S+SP
Sbjct: 207 DRRYEKERSYSRSPPHNGSRV-RSGSPGRVKSHSRSPRRSVSPRKNRS-YTPEQARSQSP 243
Query: 244 SPAKS 247
P +S
Sbjct: 267 VPRQS 243
BLAST of MS001083 vs. TAIR 10
Match:
AT5G18810.1 (SC35-like splicing factor 28 )
HSP 1 Score: 60.8 bits (146), Expect = 1.8e-09
Identity = 67/203 (33.00%), Postives = 106/203 (52.22%), Query Frame = 0
Query: 18 LLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKAIDKL 77
LL+ N+ +DL F+++G + D+++PR+ TG+ RGF FV+Y+YA++A +A+ ++
Sbjct: 49 LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108
Query: 78 DGRMLDGREIMVQFAKYGPNAEKIRKGRVMESSSKPRG---RSRSRSPRSRHRDDYRDRD 137
+ +++ GREI + FA+ N + ++ R +S G R+ RSPR R+R R R
Sbjct: 109 NHKVIGGREIAIVFAE--ENRKTPQEMRTTNGTSGRHGDYKRTSHRSPRRRYRSHSRSRS 168
Query: 138 HRRRSRSRSRDRYDRDRPHRERERHRSRSRSASPDRNKDRRRGRDDDERRSISNSDRSMS 197
RR S+ R D + R R RS SRS P RN+ + R+
Sbjct: 169 PPRRESRHSKVR--EDDLYSPRRRSRSISRSPLP-RNEREYKSRN--------------- 228
Query: 198 PTRRSPNTRRSISPRRSPSRSRS 218
RSP R ++P RS SRS
Sbjct: 229 --CRSPREERVLTPIRSRCLSRS 229
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022131916.1 | 1.2e-124 | 100.00 | serine/arginine-rich splicing factor SC35-like [Momordica charantia] | [more] |
KAA0064834.1 | 2.0e-108 | 90.91 | serine/arginine-rich splicing factor SC35-like [Cucumis melo var. makuwa] | [more] |
XP_008445340.1 | 1.7e-107 | 90.84 | PREDICTED: serine/arginine-rich splicing factor SC35-like [Cucumis melo] | [more] |
XP_011649457.1 | 3.8e-107 | 90.44 | serine/arginine-rich splicing factor SC35 isoform X2 [Cucumis sativus] | [more] |
XP_038884086.1 | 4.2e-106 | 90.44 | serine/arginine-rich splicing factor SC35-like [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q9FMG4 | 4.1e-64 | 61.13 | Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana OX=3702 GN=SC3... | [more] |
P30352 | 3.4e-26 | 45.61 | Serine/arginine-rich splicing factor 2 OS=Gallus gallus OX=9031 GN=SRSF2 PE=2 SV... | [more] |
Q3MHR5 | 4.5e-26 | 45.18 | Serine/arginine-rich splicing factor 2 OS=Bos taurus OX=9913 GN=SRSF2 PE=2 SV=3 | [more] |
Q01130 | 4.5e-26 | 45.18 | Serine/arginine-rich splicing factor 2 OS=Homo sapiens OX=9606 GN=SRSF2 PE=1 SV=... | [more] |
Q62093 | 4.5e-26 | 45.18 | Serine/arginine-rich splicing factor 2 OS=Mus musculus OX=10090 GN=Srsf2 PE=1 SV... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BQT1 | 5.7e-125 | 100.00 | serine/arginine-rich splicing factor SC35-like OS=Momordica charantia OX=3673 GN... | [more] |
A0A5A7VC44 | 9.8e-109 | 90.91 | Serine/arginine-rich splicing factor SC35-like OS=Cucumis melo var. makuwa OX=11... | [more] |
A0A1S3BCG4 | 8.3e-108 | 90.84 | serine/arginine-rich splicing factor SC35-like OS=Cucumis melo OX=3656 GN=LOC103... | [more] |
A0A0A0LQG4 | 1.8e-107 | 90.44 | RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G345920 PE=4 SV... | [more] |
A0A6J1GJ79 | 5.9e-106 | 90.51 | serine/arginine-rich splicing factor SC35-like isoform X1 OS=Cucurbita moschata ... | [more] |