MS000885 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCTTGCTGTACCTGGAAAACCCTACGAATGTCCTCCTCTTCCACAAGAACTCTCATTTGCCGTTCCTCTTCCTCATCGTCTGCGTCCCATTTTGTGTCCAGACCCACTAAGCCTACTGGACTTCCTTCTGCTAAGCCGGCAGCATCTCCCCGTTTCTCTGTTCAGAAGCTTACCAACCTCAGG ATGGCGGCTTGCTGTACCTGGAAAACCCTACGAATGTCCTCCTCTTCCACAAGAACTCTCATTTGCCGTTCCTCTTCCTCATCGTCTGCGTCCCATTTTGTGTCCAGACCCACTAAGCCTACTGGACTTCCTTCTGCTAAGCCGGCAGCATCTCCCCGTTTCTCTGTTCAGAAGCTTACCAACCTCAGG ATGGCGGCTTGCTGTACCTGGAAAACCCTACGAATGTCCTCCTCTTCCACAAGAACTCTCATTTGCCGTTCCTCTTCCTCATCGTCTGCGTCCCATTTTGTGTCCAGACCCACTAAGCCTACTGGACTTCCTTCTGCTAAGCCGGCAGCATCTCCCCGTTTCTCTGTTCAGAAGCTTACCAACCTCAGG MAACCTWKTLRMSSSSTRTLICRSSSSSSASHFVSRPTKPTGLPSAKPAASPRFSVQKLTNLR Homology
BLAST of MS000885 vs. NCBI nr
Match: XP_022159141.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Momordica charantia]) HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of MS000885 vs. NCBI nr
Match: XP_038885251.1 (protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial isoform X2 [Benincasa hispida]) HSP 1 Score: 89.4 bits (220), Expect = 1.2e-14 Identity = 49/63 (77.78%), Postives = 53/63 (84.13%), Query Frame = 0
BLAST of MS000885 vs. NCBI nr
Match: XP_038885250.1 (uncharacterized protein LOC120075707 isoform X1 [Benincasa hispida]) HSP 1 Score: 87.4 bits (215), Expect = 4.7e-14 Identity = 48/61 (78.69%), Postives = 52/61 (85.25%), Query Frame = 0
BLAST of MS000885 vs. NCBI nr
Match: XP_022996536.1 (uncharacterized protein LOC111491756 isoform X2 [Cucurbita maxima] >XP_023546953.1 uncharacterized protein LOC111805899 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 82.4 bits (202), Expect = 1.5e-12 Identity = 47/63 (74.60%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of MS000885 vs. NCBI nr
Match: XP_004145570.1 (uncharacterized protein LOC101210124 [Cucumis sativus] >KGN55566.1 hypothetical protein Csa_012846 [Cucumis sativus]) HSP 1 Score: 80.9 bits (198), Expect = 4.4e-12 Identity = 45/63 (71.43%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of MS000885 vs. ExPASy TrEMBL
Match: A0A6J1E309 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111025568 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 7.1e-24 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of MS000885 vs. ExPASy TrEMBL
Match: A0A6J1K524 (uncharacterized protein LOC111491756 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491756 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 7.3e-13 Identity = 47/63 (74.60%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of MS000885 vs. ExPASy TrEMBL
Match: A0A0A0L605 (Radical_SAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G667190 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 2.1e-12 Identity = 45/63 (71.43%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of MS000885 vs. ExPASy TrEMBL
Match: A0A6J1HCT7 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111462447 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.8e-11 Identity = 47/64 (73.44%), Postives = 51/64 (79.69%), Query Frame = 0
BLAST of MS000885 vs. ExPASy TrEMBL
Match: A0A5D3D8K9 (Dual-specificity RNA methyltransferase RlmN isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00010 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.9e-11 Identity = 43/61 (70.49%), Postives = 49/61 (80.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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