MS000826 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGCTTGAATACCTCCACGAAACGTAGAGAGGTACGCACGTTTATCTCTTCGATATGTTCAGATTTCTGTTGTTTGTTGGAAACAAGGGTTCTTCGTCATACTTTTGCCTCCATTTTCCAGCCCTTTGCGGATCAGTGGCAGTGTGTTAGTAGTTACAGTGTTGTGGATTTTGGGAGGATTTGGGTGATGTGGCGTCCCAATCGCTATGTTTTCACTCCCATTACTGTGTCTTCTCAATATGTGTATGGGACCCTGTTT GGCTTGAATACCTCCACGAAACGTAGAGAGGTACGCACGTTTATCTCTTCGATATGTTCAGATTTCTGTTGTTTGTTGGAAACAAGGGTTCTTCGTCATACTTTTGCCTCCATTTTCCAGCCCTTTGCGGATCAGTGGCAGTGTGTTAGTAGTTACAGTGTTGTGGATTTTGGGAGGATTTGGGTGATGTGGCGTCCCAATCGCTATGTTTTCACTCCCATTACTGTGTCTTCTCAATATGTGTATGGGACCCTGTTT GGCTTGAATACCTCCACGAAACGTAGAGAGGTACGCACGTTTATCTCTTCGATATGTTCAGATTTCTGTTGTTTGTTGGAAACAAGGGTTCTTCGTCATACTTTTGCCTCCATTTTCCAGCCCTTTGCGGATCAGTGGCAGTGTGTTAGTAGTTACAGTGTTGTGGATTTTGGGAGGATTTGGGTGATGTGGCGTCCCAATCGCTATGTTTTCACTCCCATTACTGTGTCTTCTCAATATGTGTATGGGACCCTGTTT GLNTSTKRREVRTFISSICSDFCCLLETRVLRHTFASIFQPFADQWQCVSSYSVVDFGRIWVMWRPNRYVFTPITVSSQYVYGTLF Homology
BLAST of MS000826 vs. NCBI nr
Match: XP_038895804.1 (uncharacterized protein LOC120083970 [Benincasa hispida]) HSP 1 Score: 84.7 bits (208), Expect = 4.2e-13 Identity = 41/85 (48.24%), Postives = 49/85 (57.65%), Query Frame = 0
BLAST of MS000826 vs. NCBI nr
Match: XP_038888122.1 (uncharacterized protein LOC120078021 [Benincasa hispida]) HSP 1 Score: 81.3 bits (199), Expect = 4.6e-12 Identity = 38/85 (44.71%), Postives = 50/85 (58.82%), Query Frame = 0
BLAST of MS000826 vs. NCBI nr
Match: KAA0049770.1 (hypothetical protein E6C27_scaffold76G001230 [Cucumis melo var. makuwa] >TYK12107.1 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 75.5 bits (184), Expect = 2.5e-10 Identity = 36/79 (45.57%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of MS000826 vs. NCBI nr
Match: KAA0062888.1 (non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa] >TYK22520.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 73.6 bits (179), Expect = 9.6e-10 Identity = 35/85 (41.18%), Postives = 47/85 (55.29%), Query Frame = 0
BLAST of MS000826 vs. NCBI nr
Match: KAA0062319.1 (hypothetical protein E6C27_scaffold154G00700 [Cucumis melo var. makuwa]) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-09 Identity = 35/79 (44.30%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of MS000826 vs. ExPASy TrEMBL
Match: A0A5A7U3C2 (Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00410 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10 Identity = 36/79 (45.57%), Postives = 46/79 (58.23%), Query Frame = 0
BLAST of MS000826 vs. ExPASy TrEMBL
Match: A0A5A7V5J2 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold387G00210 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.7e-10 Identity = 35/85 (41.18%), Postives = 47/85 (55.29%), Query Frame = 0
BLAST of MS000826 vs. ExPASy TrEMBL
Match: A0A5A7V9D6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00700 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 6.1e-10 Identity = 35/79 (44.30%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of MS000826 vs. ExPASy TrEMBL
Match: A0A5A7TKU4 (Non-LTR retroelement reverse transcriptase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00080 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.0e-09 Identity = 36/84 (42.86%), Postives = 46/84 (54.76%), Query Frame = 0
BLAST of MS000826 vs. ExPASy TrEMBL
Match: A0A5A7SPE5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold581G00620 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.8e-09 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|