MS000313 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAGAGGGATCCTCCCCTGCGAATTCGGTGGCGGCGGCGGCAGCAGCGACGGCGGCCTCCACGGCGGCGAGTCTTGCAGCGCTTCCAACAAAAAATCGAAGTACGACGTCGGAGACATTTTCTTCGGTAGGGATGATATGAAAGAATTCGTATGGGACGGTGTTTTCACTGAAGAAACAGTTCGATTTCTGGAAAGAGAGTCCGCCATGAAAGCTCTGAGAAAGAAAAGCAAGAGAAGGCTACAAACATTTGATTGCTTCGAGTTCTTGAAACTCGTCTGGTGTTTCAAATTA ATGGCCAGAGGGATCCTCCCCTGCGAATTCGGTGGCGGCGGCGGCAGCAGCGACGGCGGCCTCCACGGCGGCGAGTCTTGCAGCGCTTCCAACAAAAAATCGAAGTACGACGTCGGAGACATTTTCTTCGGTAGGGATGATATGAAAGAATTCGTATGGGACGGTGTTTTCACTGAAGAAACAGTTCGATTTCTGGAAAGAGAGTCCGCCATGAAAGCTCTGAGAAAGAAAAGCAAGAGAAGGCTACAAACATTTGATTGCTTCGAGTTCTTGAAACTCGTCTGGTGTTTCAAATTA ATGGCCAGAGGGATCCTCCCCTGCGAATTCGGTGGCGGCGGCGGCAGCAGCGACGGCGGCCTCCACGGCGGCGAGTCTTGCAGCGCTTCCAACAAAAAATCGAAGTACGACGTCGGAGACATTTTCTTCGGTAGGGATGATATGAAAGAATTCGTATGGGACGGTGTTTTCACTGAAGAAACAGTTCGATTTCTGGAAAGAGAGTCCGCCATGAAAGCTCTGAGAAAGAAAAGCAAGAGAAGGCTACAAACATTTGATTGCTTCGAGTTCTTGAAACTCGTCTGGTGTTTCAAATTA MARGILPCEFGGGGGSSDGGLHGGESCSASNKKSKYDVGDIFFGRDDMKEFVWDGVFTEETVRFLERESAMKALRKKSKRRLQTFDCFEFLKLVWCFKL Homology
BLAST of MS000313 vs. NCBI nr
Match: KAG6576802.1 (hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014829.1 hypothetical protein SDJN02_22458, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 121.7 bits (304), Expect = 3.5e-24 Identity = 66/98 (67.35%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of MS000313 vs. NCBI nr
Match: KGN57263.1 (hypothetical protein Csa_009618 [Cucumis sativus]) HSP 1 Score: 116.3 bits (290), Expect = 1.5e-22 Identity = 61/99 (61.62%), Postives = 72/99 (72.73%), Query Frame = 0
BLAST of MS000313 vs. NCBI nr
Match: KAA0067665.1 (hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa] >TYK23669.1 hypothetical protein E5676_scaffold577G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 107.8 bits (268), Expect = 5.3e-20 Identity = 58/98 (59.18%), Postives = 70/98 (71.43%), Query Frame = 0
BLAST of MS000313 vs. NCBI nr
Match: KAG7030840.1 (hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 74.7 bits (182), Expect = 5.0e-10 Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of MS000313 vs. NCBI nr
Match: KAG6600176.1 (hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 74.7 bits (182), Expect = 5.0e-10 Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of MS000313 vs. ExPASy TrEMBL
Match: A0A0A0L658 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175640 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 7.2e-23 Identity = 61/99 (61.62%), Postives = 72/99 (72.73%), Query Frame = 0
BLAST of MS000313 vs. ExPASy TrEMBL
Match: A0A5D3DK72 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00350 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.6e-20 Identity = 58/98 (59.18%), Postives = 70/98 (71.43%), Query Frame = 0
BLAST of MS000313 vs. ExPASy TrEMBL
Match: A0A7J7DBE1 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW08G00189 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 6.1e-06 Identity = 38/105 (36.19%), Postives = 57/105 (54.29%), Query Frame = 0
BLAST of MS000313 vs. ExPASy TrEMBL
Match: A0A5D2BXI7 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D07G051300v1 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.0e-04 Identity = 40/111 (36.04%), Postives = 61/111 (54.95%), Query Frame = 0
BLAST of MS000313 vs. ExPASy TrEMBL
Match: A0A061FZA7 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_014918 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 9.8e-04 Identity = 44/114 (38.60%), Postives = 63/114 (55.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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