MELO3C035172 (gene) Melon (DHL92) v4

Overview


Name	MELO3C035172
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Unknown protein
Location	chr11: 26689633 .. 26691183 (-)
RNA-Seq Expression	MELO3C035172
Synteny	MELO3C035172

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATATCCTGGTGTCTGTGGTCAATTCTCTTGCTTAGAAAATCGGCAGGAGTTTCTATGTTTACTTGAACTCTGTATGTTTGTAGAGGAGGCTTATATATATGCATACGCCCTGTATCTTTGCTGGACACTGCAATTTCTTGAATTTAGAAGCAAACATGGGTTTTATGGATCTTGATCCTTAACTTTCTGTGCAGAGGTGAATTGTTTTTATGGCTGTGTGACTTCCAAATTCTATGGTTTTTAGAACAAACGATGGATTTTATTGATTATGAATCATGAACTTGCTCCTTTTCTTTTACGGGTGTATGCTAGTTCTTCATTTTTGCAACATCCAGTCTTGAGAATTTGTACCACTTTAGCGAACTGCTTTCTGCCACATACATCTATCATTTGGATGGTGTGAATTTTGTTTTAAATTCTTTGGTTTATGATTTAGGCCAAAGAGATTGGAACGGTATAAATAAATCTCAACGGCCTGAGTATTGAAAAGGTTAGATCTCCTCCAAATCTTGATTTAGTATGCTTTCCTAATTTACTTGCTGCAGCATTGTTCTTTTATTCTTCATCTTCATCTCAAATAGGACATCCTGGCTTTACCATTTTTTACCTTAAATGAATGCTATCAGTTCAATTAATGAATTGTAAATAAGAACATTCTGCACGAGCCATTTTTTGTTACCAGAATGACAGGATTCCGAAGATATTAGGTTTGGTTTTCATTTTGCAAATCACCCAATAAAATTATTGGTTGAATTAGTGAAAATTAGTAGCACCAATCAAACTTTTTTATTAAGAGCATAATTACTTTGAGTTGAAATTCTAATTAGGAACCTGTGTTAGAGCCTTGAAAAAAGAAAAAAAAATCTCAAACTTAAATCTCTTGGCAACATTTTGCATTGGTAAAAAATCTTTACCTTGCTGATTTAATAACAATACAATCATACAATACAAGTGCACCTATTCTAAGTTCTACCATAACTTCATAATCGAAGACAAGGAACAACACAACAACATTGACAATAAGAAAATGCTCTCTTTCTGTAACTATGTATTGTACAAATCAGAAAAGAAATCATAATTCTAATTCACATCTTCATTAGTCTCTGTAGTTCTTAAGTTGCTGCTTTAATAAAGCAGCCCTTCTTGCCTTAAGCTCAGCCCCTTCAATATGCAACAAAACCCATTTCTCATTCATATCCTTCAAATTCTTCTCCTCCATTCTCCTCAGCCCTTCTCTCCACACCCCATTCCCCGGAAACTGCTGAGAAAATTCAGCCACAAGAACAGGAAAGTTCTTCAGATCAATATCCACCCCAACCCCTTCTTTTCTAGTGCTTGATCTCTGTTTGATTCTTCGTGAAAGTATCCTTGAAGGTGAAATTACCTGTGGTTTTCTTGTTATAGGTGTGGGGGATTTTCCCCAGATGCTGCGGCCGAGGTCGAGGATCTGACGTTGGTGAGGAGTTTTGATGAAGGACTTTGTTCTTGCGAATTTGTGGTACAGGAGTTTGAGGCGGTGGAGCTTATCGGCGATGACGGAGTGTGA

mRNA sequence

ATGAAATATCCTGGTGTCTGTGGTCAATTCTCTTGCTTAGAAAATCGGCAGGAGTTTCTATGTTTACTTGAACTCTGTATGCCAAAGAGATTGGAACGGTGTGGGGGATTTTCCCCAGATGCTGCGGCCGAGGTCGAGGATCTGACGTTGGTGAGGAGTTTTGATGAAGGACTTTGTTCTTGCGAATTTGTGGTACAGGAGTTTGAGGCGGTGGAGCTTATCGGCGATGACGGAGTGTGA

Coding sequence (CDS)

ATGAAATATCCTGGTGTCTGTGGTCAATTCTCTTGCTTAGAAAATCGGCAGGAGTTTCTATGTTTACTTGAACTCTGTATGCCAAAGAGATTGGAACGGTGTGGGGGATTTTCCCCAGATGCTGCGGCCGAGGTCGAGGATCTGACGTTGGTGAGGAGTTTTGATGAAGGACTTTGTTCTTGCGAATTTGTGGTACAGGAGTTTGAGGCGGTGGAGCTTATCGGCGATGACGGAGTGTGA

Protein sequence

MKYPGVCGQFSCLENRQEFLCLLELCMPKRLERCGGFSPDAAAEVEDLTLVRSFDEGLCSCEFVVQEFEAVELIGDDGV

Homology

[Close]

BLAST of MELO3C035172 vs. NCBI nr
Match: KAG6570826.1 (hypothetical protein SDJN03_29741, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.1 bits (183), Expect = 3.0e-10
Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 31 LERCGGFSPDAAAEVEDLTLVRSFDEGLCSCEFVVQEFEAVELIGDDGV 80
          L+RCGGFSPDA+A++E+ T+V SFD+GL  CEFVV EFE VELIGD GV
Sbjct: 2  LKRCGGFSPDASADLENSTVVGSFDQGLGPCEFVVLEFEPVELIGDVGV 50

[Close]

BLAST of MELO3C035172 vs. NCBI nr
Match: KAG7010669.1 (hypothetical protein SDJN02_27464, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 74.7 bits (182), Expect = 4.0e-10
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 29  KRLERCGGFSPDAAAEVEDLTLVRSFDEGLCSCEFVVQEFEAVELIGDDGV 80
           KR  +CGGFSPDA+A++E+ T+V SFD+GL  CEFVV EFE VELIGD GV
Sbjct: 100 KRTGKCGGFSPDASADLENSTVVGSFDQGLGPCEFVVLEFEPVELIGDVGV 150

The following BLAST results are available for this feature:

BLAST of MELO3C035172 vs.


Match Name	E-value	Identity	Description

BLAST of MELO3C035172 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6570826.1	3.0e-10	71.43	hypothetical protein SDJN03_29741, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7010669.1	4.0e-10	68.63	hypothetical protein SDJN02_27464, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of MELO3C035172 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C035172 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C035172.1	MELO3C035172.1	mRNA