MELO3C034750 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034750
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	Transposase
Location	chr11: 4958866 .. 4965369 (+)
RNA-Seq Expression	MELO3C034750
Synteny	MELO3C034750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTATGGTTCTTGGCTTGCAACTAGTATGTTACATTTTCCAATTAGTAAAACAATTTCATTTTTCCTCACTTAGATGACTTTTTTTTCTTTTTCGAACTTCTGCCAATCTATGAAGTATCATGCTATGCATGTTTCATTATCATCTAATTTTAATGTTTACGAATAGTGATAGACTAAATTAAAAACTATAAGAGGATAAGATACAAAACTAGGACTTCTCAATTTAAGCCATTAAAGATTTGCTTATGTGTTGTATGTCAATGATGATGTTTTCTGGTGCTATGGTTCCCAGGAAAAAACAAGGATTATTTAGATCAATATATTGTCTACTTGATTTTTTGGGTTGAATTTGATAGAAGAGGAACTATAAGAGATTTTTGATAGCAACACTTCCCAATCCTCATCGTAAGAAAGTTTTGAAACTTATTTTGCAACTGAATTTTATATATTATTTTGGATTTTTGGAGTATGTAAAATTTTAAAGTGTTTGTTATTTGTTACATTGTTTGTTGTTTTCTCATAACATTGGATGCAACTTTTGTTCTTGGAATAACTTTGAGAATGACGTTAACTTAATTTATCATGAACTCCGTTACAAATCAAATAATGAGAGTTAATATATTGCATATGAAACAATAATTCTATAACTTACGTAGTTTGCTATTCATTATTAGGGCTTCCGAACTTGTAAGAAAGAAGAAGCCTCTATGGAGGGTAATCAAGATATGGGGGTGGGGATTTAGTAAAAGAAAGAGGTAAGTGTGCTTTATGTTTTATAACGTAACTTAACTATTTTATTTTAGGAATCATGTTAACATGTACTTAGGAATGTTGCTTTGACTATCCTGCAGTGTTAGCCATTGAAAATATATTTTGTGCAATCCACTTAGACATATGTTTTAGGAATCATGTTGACATGTATTTAGGAACTTGATACTTTGTTGTATTGACTATTCTGCAGTTATGGTAGTCATTGAAAAGCTATTTTGTTCAATCCGCTTAGACATATATTATAGGAATCATGTTGTTTTGTATATACTTTGGAGGAGGGGGCTAAGGGTAAGTTTATGCTAAGTTTCAACTTGATGCAAACTAGAACATTGTTTGGCCTGTAAAGATTAAATCGAAACTTACATTTGCAACATTTATATACTATGGTTATGCCTACACTAAAAGAATTTTGGCCTTTAATGTCGGTTTAAAACTGACATTAAAGGCCTTTAATGTCACTTGAAAACCGACATCTTTGTGAGCGTTATTAAAGGCCTTTAATGTCGGTTGGGCTTTAATGTCGGTTTAAAAACGACATTAAAGGCCTCTTTAATGTCGGGTTAAAAACGACATTAAAGGCCTTTAATGTCAGTTTTCAACCGACATCTTTGATGGTGTTATTGAAGCCCTTTAATGTCGGTTGGGCTTTAATGTCGGTTTAAAAACGACATTAAAGGCCTCTTTAATGTCGGTTTGTCAGTTTTCAACCGACATCTTTGATAGTGTTATTGAAGCCCTTTAATGTCGGTTGAACTTTGATGTCGGTTTAAAACCGACATTAAAGCCTAGTTTTTGGATTCATTTTTACAAATTTATTTTTATTTAATTGTCACATTATTGTCCTATAGACCGACATTGGATCAATGTAAATAAATATGTTTTTCACACGCCAACAAATTCATATTATGTTAGAAACTATAATATTTGTCTTTTACATTTGAATACACAAAATAAAATCTTAATATTATGTTTATATATACATTCTACAATAGTACATGAAAAAAAGATTCTAATACAAGAATTAAATAATTAAAAATCCTAAATGCCTTCTCAATCTTCAATTTTCAACGGTCGCTTGGCAATCTCTGCACAATCGCTTAGCTTTCAACCCGATATGACTTCAATTATCTACAAACAATGTCCAAATAAACCATTTATATAGAATAACAAAGCTGTTTGAAGTACTAAAATTGCAGAGAAGGATGAAAAGTTTTTAAGATTTTATATCCACACCCCAATCCACATAACTCTCTTTAGTCTACCTCAGCCATCAGGCTTTCCTAAATCTCTTCAATCTATTATTAGAAATATTCCATAGATGCAATCATATACAATCCTTTTCCCAAATAAAAAAAAAATATTTTATGTGGCAACCTATGAACTCTTGTAATTGATTAGCTCAGAATATTGCCCGTCAAATGAATAATCAACATTTTTTTACATAACATTATTATGAAAACCAATATCAATCTATAAAGAAATAAGCAACATCAACACAATAAGTTGAAAAGTAAAGCAATCATATTTTTATACCTTGGGTGTGGAGAACCTTTGATTGGCTTTTGGCCATATTTCCTCCATGAATAATCATCATATCTGCTAGCTTGTTACTAATCGTGGGCACCTTAATCGACCGCTTCACTCTAGTGTTATTAAAGGCCTTCCCCTTTCCTACCATTGCATTTCATAACAAAAATATCAACACAAAATACACAATCAACAACCAACAATCCATTCTAAGATTCTTGTAATTATGAATAAAATCATCCTTACTCTTGGACTTATCAAGATCAAGAAAGTGAATAAAAATGATTGCTTTACTTTTCAACTTATTGCTCAGTTATCATAATCGGCACATCAAGTTGACTTTCATTTATTAGATGCTCAGTTATAGTAACTTCATTATCTGCTGATACTTTAAGATGAATAAAAATGGAAACAAAAACCTTATGATTCAAGAGAATGAGGAGGAAAGCTTTACATACCTTTAGCTCTTCTTCTTACATTTCTAATGATAAAAAAGTTGCTCGAAGCCAAATGAATTGAAATAAAAGCAATAAATAAGCGTGAGAGGAGAGGCAAATGAATTGAAAGATTCATGTCCGGTTCAAGAAGGCATCATCCAAGTATGTTGGATAAGGATTCCACAGTCAAGGTTTCACATAGTAAATAAATAAAAAGAAAGAGAAACATGAAGCAGGTTGCATTGAGAGAACCTGTTATTGAACTAAGAACATTGATGCAGTTAACAAGCCGATCACAAAGATTATCTAAAAGGACTGTTCTCCAATCGCTGAAATAGCATACAGAAACATAGGCATGAGTACTGTAAACTATGGTGAAGCTAAAAATGCAACCCATTACAAAATTTTGCTTACTGACGGTATAGTCTACTTGAACATTGTTCAAATAATATCTTATTGTTTTATGTTTACGTTATACTGCTTGGCCAAAAAAATATCAATGTGTACATAACTGCGTAAAAGGAAGCATTCAACTTGTCGAATGTAATATTTATATTCTATTCCATCACCAAGCATAATCCATTGTTTACCTTGCTACCTAAGACTTGTATGTGAACATATATAAATAAACCTTAAAAAGTAATCGCCGACTTCAGTATAAAAGATAAGATCCAAGAACAATGCAACTCCAGCTAACCCTGGATGATATTATTAACTGGACTAATAAATCATCGAATGTTCCAAATTTCCTGAATACTGATATATCTTCTTACCATTTACTGAAAAAGTGACAAGTTAACAATAATACCAAGAAAGGAACCCATGGCCATATCAATTAAAGTCCTACTTACTAATTTACTGTTGCATGCGAACATATCTATATATCATTTGAAATGAAAAAAAGGACACTTGAACCCTTACATGTACAGTGCAGGTATGACCTGTCACATTTGTTACCACTAACCTCCAAGCACCATTTTCCTGTCCAGAAGAATCCAGCCAAAGTTTTACTTCCCATTCACATACACCTAATTTATGCATTCTTACACCAACAAATGACTGGATTTCACGAGCAAGTTCTCCCAATATGGTCTCCACTGCAGCCTCTTTTTCTTCAGTATCGAAGATAGCTCTCCTGGAAATTAGTCCAACAAACTCCTCTAAGAATGCTATCATTTATAAAGAAAAAAAAATACATTTCAACCAAAGAAGGCGGCCACTTACTTGTGATAGGGCACAAGATCACCTATTTGTTGTTCTCTTAAGATGTAGAGATACATATGAGCATGGTCTGGTTTGATAGCACTTCTGAGGCAAGAATTATCTGTCGAACAAAATATAAAGAATAAGTTTATTACTATTAATAATATAATCACTTGACAATGGTAATTGCACAATATCAAGCCAAGAATACCGTATCAAGATGTGTGTCAACCATTAGACGTACAAATGGAGCAGTAATATGTTCCAAGTACGATATAGACTTAAAAGAGCAGCTGCTTCAACATTCTTGGCTATTTCTGGCTGGGTAAGAGCAGCAAAAGACATAATTGTTCCCTGCGAACAAAGATAAAAGATGACACCATAGCAAAAATATACGATTTCAGATTAACAATCTTGTAGAAGACATATGAGACCTGTGAGTGTCCAACAATATAAATTTTCCTGTTTGTCAAGGAATTTATATAGTTAATCATTTCTGCAAGATCGTACAGGGCCAACTCTTCCCAACTCCAATTCCAAAATTCCTACAATCATAATATACTAGAGTCAAACGACATAAATAGGAACTAAACAGACCTTATGACTTATGACTTTTATTTCTAGTATACCTTTAGCTCTTCTTCTTACATTTCTAATGATAAAAACCTTATGACTCTCATTTAATAGTTGCTCACTTTAAAAGACTTTGTCTACTATATTGTAGCCTGCACCATAAAATTGTTAAGAAATGTCTTAGAAACTAAACATACTGCATACATACTTAAATTAATCAACATAGCACCATACTTGATAAATCAAAAGTAAAGCATAAAAAAGAGTTTTCCGAACTATGGAAAATCTTGTGATTGAACCTTCAAGCATTTAGCAACAAATGTTTTCCAATTTAGAGATTTGTATAAAGAACCCATCTGAAATCCATATTCATTCGCCAAATAAAGTCACAAATTAGCCAACATCACTCAATCTCCATTCGCCAAATAAAGTCACAAAACAACATACCAGTAAAATTAATGTACCTGATTTTTTCTCAACTATATTGTATCTACAAGACAAGAAACAAAATCAAAAAGAGCACCCACATCTGTAGAAATAAGAAAATAAACTTGTTGTTTCCTGAAATGTTCCAAGGCCTATACATAACAAAATCAAATAATTGTTAAGTGACTTGCTTTTTGTTTTTCTTTTTTTCTTTCATTCTCTTGGAATAAAATTTTAAACCAACAAGAAACGCATCAAATTTTAAACAAAAAAACTAATCTAAATCATAATTTACAAATCTCAAAATACCACTAAACAAACTCATGTTTAATGTACATCGGCATATGAATTAAATACCCATTAACCCCCCAATAATACCCACAAAGCTCTTTCTTTTAATACATGAAACATCATAAGAAAATGCAAAAAGAAAAGAAAAAAAGGTAATGGGATGACCAATGAATACCATTTGCATATGATAAGGTAGTGAAAGGTAATGGAGAAATATCTGGGATTTTTTTAAAGTGGGATGACAATGAAAACTCAAGCTCAACACCGACCATTCCAAAGCAACTCTCACAAATGGACAACACAAAAACAAACAAAGAATCAGACCGACCCACACTTTTTAACTACCAACTGCTTAAAGAGAAAAAAACCAACTTGGGTCCCCTTCCATTTTGGCTTCTTCTGCTGCAACTTTCCTTAATTTCTGGGCACAAATTACTCTTCTTTTTATTCCTACAAAAGTCACAAAAAAACATATCGCGGTAATGGGTTTTCAATGAGAAACACACCTTCATTTTACATTCATCTTGTGGCTACCATAGTCCTTCTCCACCTAAATTTGCCTGCAACTCAATAAAGCCAGGAGAAAAAATATTAAGGGGGTGATTTGATGTGGGAAAATGAAAGTCAGAGAGAGAGAAAAGAGAGAGGAAAAGACAGTTTCCCTTTTCAAAACTCCCCACCCCAACTAAAGAAACTCTAAACCAGAATTCACAAAACTAGAGAAACCACACAAAATACTAAAAAGAAAAACTTATAACTTATATAAGAACCTCTAACCATTCTATCTATAAATTAAATTTACTCGATCTTAGAAGTATTATTGAAGAAATTTTGAAACTTACATAAGTGTTGAGCTGCCGGATGAAGCTTGAGAAGTTGTTATTTGTTGATAAAGCCGATGAGGTCCCAATTGCATTTGTTGTTCGTTCACCCAATAGCTCGATAAGGGATTTTTAAAAGATTTTTAAATTGCAGAAAAATGAAAAAATAAATAGAAAAAAACCAGTGAAGTAGCAACCCATAAACGATTTTTAAAAGAACAAAGAACTTTTAACACAAAGAAAGATTGAATAGGAGTATCGACCTATAGAAGTTGAAATTCGGAAAGGAGAAATTGTTTGCGGATATGGAACGGAGAGTGTGAAGAAGGAGGAGAATGGGAGAGAGTGCAGAGCGCGCAAAAAATTAATTAATTTTTTCATAACAAAGACGATGACAAGGTTGGGCATGTGGTTGTTCGACGACGACAAGGCTGGGCACAACGGATGA

mRNA sequence

ATGGATTTTATGGTTCTTGGCTTGCAACTAGGCTTCCGAACTTGTAAGAAAGAAGAAGCCTCTATGGAGGTTATGGTAGTCATTGAAAAGCTATTTTGTTCAATCCGCTTAGACATATATTATAGGAATCATGTTGTTTTGTATATACTTTGGAGGAGGGGGCTAAGGGAGTATCGACCTATAGAAGTTGAAATTCGGAAAGGAGAAATTGTTTGCGGATATGGAACGGAGAGTGTGAAGAAGGAGGAGAATGGGAGAGAGTGCAGAGCGCGCAAAAAATTAATTAATTTTTTCATAACAAAGACGATGACAAGGTTGGGCATGTGGTTGTTCGACGACGACAAGGCTGGGCACAACGGATGA

Coding sequence (CDS)

ATGGATTTTATGGTTCTTGGCTTGCAACTAGGCTTCCGAACTTGTAAGAAAGAAGAAGCCTCTATGGAGGTTATGGTAGTCATTGAAAAGCTATTTTGTTCAATCCGCTTAGACATATATTATAGGAATCATGTTGTTTTGTATATACTTTGGAGGAGGGGGCTAAGGGAGTATCGACCTATAGAAGTTGAAATTCGGAAAGGAGAAATTGTTTGCGGATATGGAACGGAGAGTGTGAAGAAGGAGGAGAATGGGAGAGAGTGCAGAGCGCGCAAAAAATTAATTAATTTTTTCATAACAAAGACGATGACAAGGTTGGGCATGTGGTTGTTCGACGACGACAAGGCTGGGCACAACGGATGA

Protein sequence

MDFMVLGLQLGFRTCKKEEASMEVMVVIEKLFCSIRLDIYYRNHVVLYILWRRGLREYRPIEVEIRKGEIVCGYGTESVKKEENGRECRARKKLINFFITKTMTRLGMWLFDDDKAGHNG

Homology

[Close]

BLAST of MELO3C034750 vs. NCBI nr
Match: TYJ98717.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-06
Identity = 30/36 (83.33%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 57  EYRPIEVEIRKGEIVCGYGTESVKKEENGRECRARK 93
           EYRPIEVEIR+ EI CGYGTESVKKEENGRE R  K
Sbjct: 494 EYRPIEVEIRREEIGCGYGTESVKKEENGREWRVGK 529

[Close]

BLAST of MELO3C034750 vs. NCBI nr
Match: KAA0032683.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 6.9e-06
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 16  KKEEASMEVMVVIEKLFCSIRLDIYYRNHVVLYILWRRGLREYRPIEVEIRKGEIVCGYG 75
           K +E  +  + ++EK F      I    H+ ++++      EYRPIEVEIR+ EI CGYG
Sbjct: 459 KLQEDIVITLCLLEKFFPPSFFTIMV--HLTVHLV----REEYRPIEVEIRREEIGCGYG 518

Query: 76  TESVKKEENGRECRARK 93
           TESVKKEENGRE R  K
Sbjct: 519 TESVKKEENGREWRVGK 529

[Close]

BLAST of MELO3C034750 vs. ExPASy TrEMBL
Match: A0A5D3BHW8 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00090 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06
Identity = 30/36 (83.33%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 57  EYRPIEVEIRKGEIVCGYGTESVKKEENGRECRARK 93
           EYRPIEVEIR+ EI CGYGTESVKKEENGRE R  K
Sbjct: 494 EYRPIEVEIRREEIGCGYGTESVKKEENGREWRVGK 529

[Close]

BLAST of MELO3C034750 vs. ExPASy TrEMBL
Match: A0A5A7SQK7 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold853G00050 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.3e-06
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 16  KKEEASMEVMVVIEKLFCSIRLDIYYRNHVVLYILWRRGLREYRPIEVEIRKGEIVCGYG 75
           K +E  +  + ++EK F      I    H+ ++++      EYRPIEVEIR+ EI CGYG
Sbjct: 459 KLQEDIVITLCLLEKFFPPSFFTIMV--HLTVHLV----REEYRPIEVEIRREEIGCGYG 518

Query: 76  TESVKKEENGRECRARK 93
           TESVKKEENGRE R  K
Sbjct: 519 TESVKKEENGREWRVGK 529

The following BLAST results are available for this feature:

BLAST of MELO3C034750 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98717.1	2.4e-06	83.33	transposase [Cucumis melo var. makuwa]	[more]
KAA0032683.1	6.9e-06	48.05	transposase [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034750 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO3C034750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHW8	1.1e-06	83.33	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00090 PE...	[more]
A0A5A7SQK7	3.3e-06	48.05	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold853G00050 PE...	[more]

BLAST of MELO3C034750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034750.1	MELO3C034750.1	mRNA