MELO3C034744 (gene) Melon (DHL92) v4

Overview


Name	MELO3C034744
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	ras-related protein Rab11C-like
Location	chr11: 14079141 .. 14084707 (-)
RNA-Seq Expression	MELO3C034744
Synteny	MELO3C034744

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCCTCCAAATTTTGTAAAGAAACCCTAATTTTTTTCTCCCTCATATTTCTCTTCGACAAAAGAAAGCTCCACCCTACGCATATTCCATTTCTAATCGTTCGTTTGCTCGAGTCGATTCCAGCAACCGTCGTCTGCTCACAGCGTCCGCCACAAGTTCGATTGATCTTCTCAAGTTGCTGTTGTTTCTGCCCTTTTCCCGTCTGATCTCCTCAAGTCACCACCGTCATCTGCTCACAGCATCCGCCACCAGTTCGATCGATCTCCTCAAACTGCTACCATTTTTACCCTTTTCCAGTATGATCTTCTCAAGTCGTCGTCGTCTGCTCGTTGTGTTCACTGGTTCGTCCGCCACCAGTTGCATCCGTCATCATTTTTGCTCGTTACAACCACAACCATCACCAGGTTCTTAACTCATTATTTATTTCTTTATTGCTTATTTTGCATCACTGTTCAGTTTGTTTATTCAAGATTAATGTATCACTTGGGAATGGCTATGGCGGCCACTACCCTTTCGAACCTGCCTTTTGTCCTCTTCCATGGAAATTCACGCAAAAATGAATTTAGGTTTATGGGTATGTAGAGATAGCCCATCAAGTATCTCAAATCCAATCTTAGAGCTCTGGTTATGAGGTAATCGTTTCTATTTTTGTTATTTGTAGATTTTTACTTCACTTTTAGTTGTTTTCATGAGTGTACCTGGGTGGAGGTTTATGTAAGCTTGTGTTCTCTGTTCTTTTCACTATTTTTAAAAAAATCAATCATGGGTTTGGGATATTGCTTGCCTTTTTCATCTCTGTTTTGAGCTTTAGCTTTTGGGTCTCTTTGCGGATGTTCCTTTGTTCAAATGATATTGCAATAGAGATAATTATTGGTCTGAACTTGAAATTCGTATACCATATATTTATTGGGTTTAATGTCCGAAAACTCGTAGATAGTAAATATAATCAATTGACCATTATTAATAAAGTGTTTTATTATTATAATTTCAATAAGTGTTATTGATTATATTATTAGTTTTGTCTTAATAACCTAAATCTAATAAACTAACATTCTAAGCTATTTGATGAGTCTTGAACAGTATGTAGAGACATACGGGGATTAATGTTCAAGATCAGCTTAAAGGGTCTATAGTATAGGGTTAAGGTTGGGTACCTTATCCTGTTAACACTATGGATACGGCTCACTTTGTATTTGATACGAACACATTGATCCAATGCGTTCATGTATGCGACATGCGAGTCCCTATGCAATGAGTTTGCATAAGACTGGACCACGAAATAGTAATCACTAGATGTAACTCCGTTAACTAGTTGGATTTCTATTTCATTAGGATAACCTAGGTGACTTAGTCTTAATCTGAGTGTATTATGAACTCCTGTTTGCGAGGGATTGTCCTTTGATTTGTACGAGTGAGAGTGGCCAAATTACTGACTCAATATGCTTATCATTTTGGAGACAAAATCGAGTGGGGAGCTTGGAACATAATCATTCAAGATGGAATTCACTCTTTCCTACCTTTAGGGTAAGTAGATAAGTGTTCTCTTAAATGGTGTCTCCGAGACTTGAACAAAGGGTCCTACCCTCTCTATGGCATGAGATGGGTTTCTGTTTGGTGGTTGGACCATAAACAGGTTGTTCATTAAAGGAGCACTGGTATTTAAGGACTAGAAGTAACCCAGGAGTAAAACGGTAATTTGACCCAACGGGTGTTACGAACACTTGTGAAGGACTAACTTGCTGGTATTGGTCTATATCCGTGGACACAGAAATATATCTATAGTGAGAAGAGTTCAGCTGTAAGTCTTTAGTGGAGTGTACACACAGTTAACGAATATTGATTAATGTGGTTAATGAGTTTAGCTAATTAATCTCATATCATTGTAGCTTCTGATCTGTAGGTCCATTAGGTTCCCTTCCTAGCTCATAAAGAGTAATGAGATTTATTTATATTGGTTGTAATTTAAAATATTCAAATTTACTTTGGGAATTAATATAATGTATATCAATACATTATAATAAGTTTATATTTTAATTAGCCTTTATTATATAAATTTAATTTTGGATATGATTCAAAATTAAATTACGAGAGAATAAAATATTTGAATGAGTTCAAATATTAGTTTAATGTGAATTAGATTCATATTAAAACTATAGGTTAAAATTTAATGTGTATGTGATACATATTAAAACTATAGGTTATGAGAGAAATTTATATTTGAATATGATTCAAATTTTGGATTAAATTAAATATGAGATATTTAATTTAGAAATTAATTAATTGGAGAATTAATTAATAGTTTAGTTTAATTCCGTTTAATTAAATTAAATTAAATTAAATTAAATTAAATTAATTAAATTAAAACTATAGGTTATGTGAGAGATATTCATTTAAATATGATTTAAATGAAATATTAATTAAATATGATTTAATTAATTTAATATTTATTTATTAAATTAATAAGGAACGTAGGTGGTTTTCCCACGTTCCCATTTATTCTCTCAAACTTCCCTCTTCTTTCGTTTGAAGAAGAGGGAATTCTTTGCGTAACAAAAACACAGAAGGCATTCTGTGATTTTTTTGCAAAAAAGAGGATCATTGCATTTCTCTCAAAAAAAATTTCCTCTCTAACTAAAAGAAATTCCCTTAATCCAATTTGGTTTCCACAAACCATCTCAATCAGAGAATAGGAAGGTTTCCAAGTGGTGGTGCCCAAATTGGTGATTGGTAGATTCAGAGTCGTCAACGAGCGTAAGTTTTCTTCTCTGTATTTTTCTTCAAAGCATGTTTAACCATAAAATTTTTTTTTGTAATTTTTACTAATGTATTGGTATTTTTTAAGGTTCCAACTAAAATTGAGTTTCTGTAATTCTTCCGCTGTAAAGGGTTTTCATCCCTTCAATATTATCTTAACTTTCTCCTAAATTTACCTCTGGAAATAGTGTTGCGACTAATATCATTCCTGGTTTAACTTTCAATCTTCTTCCTTTAGTGTAGTTAGCGAATGAAATTCTTGCAGGTTTCATGTTAACTCAAGGAGTTGGTAATGGATCTTGATTCATTCAAATTTGATATAGTTTTTGTTGTTTTGTTTAGGGTTGTTAGATGAAGGGGGAAGGATGTGGTTATGTGTTGTGGAACTTGTTGTTTATGGGGCAATCCTATGAAATATTTGTGTGGATGCCAATCAACTGACTTTGGTGAACCAAAAACAAAAAGAAATCTTCTTGACAATGCTAGCAATCTTCTTACCAATTTGTTAAGTGGTGGAAATTTGGGATCTAGGTCGATAGCTGAAGGTACGGTTTCTGATTTGTTTGGCCACCCACTCTTCTTTGCTCTATATGATTTGTTCTTATAGGTATTTGCATCTCATAAATCTCTTCGGTTTCAAATGAAATATTAGTTTCCTATGAGGACACTCACTCCCTCTTATAATGTTAATGTGATGTGCACCTTTTCATTTTATCTACTCATGAGATCTAAACATCATTTTGTTTTTATTCATGTTTTATTCTTCATCTACAACATGGATTTGTTTATAAACTTGCCTTTAGACCAAAAGCATTTGTTGTTGCATCAGAATGCATTTGCTTTAGAACTTTTGAAGTGCTTTTTATATCATGTTCTGTACACTTTCTTTTGGTTACAACTTGTAAGGCAGAGTTAGTAAAAGGGATTGAATGAAATTAAAAAAGAAGAATATAAATTTGGTTAAAACTATTCTATCACTCTTCTTTATGTTGCTACTGCAGCTCTACTCCTAAAATTCATCATGGCATCTCTAACATCTCTAATTTCCTCCTCTATAACTTTTAAGTTCGACAGTAAGTACTGATTTGTATTGTTCTGTACTTGTTCACTCCCAAATTGATATTGACATTCACTTGTTAGGCTTGGTTGAAATAGATCCAAACAAAAGAATGCCGCATTTCACCTCGGAGAGAAGAGGGTTAAATACATGGCTTTTCATTTCTTTATTTTTTACAGAGTAAAATATTATTTTAAGGAACTTCATTGCTAATTTTCTTGGTATTTTTTTTCTGTGGCTAATGTTATGTTTACCTTAGAATTTTTCATATTTACTTTGATAGTTCATGATCTTCTTGTTCTTGATGATTTTCATATTTAATAGGAGCCTACTGTCCCACCCTCAAGTTTTGATTCTCTTCCTTGACACCTGCTAATATGCAGATCTATGCTCGAAGGTACTCATTCTTTTCTATACTAGAAAATTGTTGTTATGCACTTCTTAATATCTTGTTGACTCGAGCTTCAGTTCTAGATTGTTGGTTCTAATTTTTTGATTTGTGGTCATTTGATTTGTAACTTTGTTTGGAAATTCCATTGTTTACTCAATAATTCAATTCTATGAAGGATGAATTTTGTTATAGTTGTTTGAAATGAAACAATTTTTTGGTCTTGTGGCATTACACAATTGTGTGAATTTATAGATTTATACGCTTTTTTTTTTCTGGGTGTAGAAATGAAACAAATTTTTGGTCTTGTGGCATTACACAATTGTTCGGCTTATTTTAGTGCTTCTCTCAATATTTACCTTCTTTCTAAATAGATATGTATTCAAGAAAATGATCGTGGTTAGTTTTCTATTGTTCTCTGTTACTAATAGAACCCCAATCTTTATAGCTAAAATGACCCATTCAAGATTTATACTTTTTTCTGAGTGTAGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAACTGCACTGCCCACCAAGAGGTTAGTTTATTTAGAACCTATATCAACTATTTAACTGTTTGAAATACTGCTTATTATTCCCAAGATATGATCAAATTAACTCGATTCTGCCTTTAAAATTTGTCAACTACAAATGAATTACTAGTTAACTCGGGGGGTAAATAAATAGCTATTAACTTAGGAAATGTTTAATGTCTGCCTCACATTCAACGATAATGCTTAATGATACAAAACATATCACATAGAAATTGGAGAAAATATAGAGAATTCGGGGATTCTTCAACCCGCTTTTCAATTTGGGGATTCTCTTGCTCCTCAAATGTTCCTGTCTCAGCTACCTACTTCAAATGATTCCGATTCTTTCAATTTTGTTTACTCAATTGTTGAATTTGATATTTTTGGATCAGGTTTGTTCAAGAAATCTAGGGTAGAGACTACTATGGCTCATAAGGTAGACCACGAGTATGACTATTTGTTCAAGATTGTTTCGATTGGGGATTCCGGCGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTCTACTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAGATAAACAAGTTTTGTTGATACTAGATATAAGAGAACTAGTTTTGTTGATATTTTTTTAATACTGGATATAGGTGAACTAGTTTTGTTGATATTGGATATAAGTAAAAGACAACTTTTGATATGGTATACCTTTAGGCTACACATATATTTTGTTTATACCGACATATAGATGGAATGTTTAGGCTATTGTTAGAAGTTTGTAATGACCAACTAATATATGTATGATTCATTGATATATATA

mRNA sequence

TTTCCTCCAAATTTTGTAAAGAAACCCTAATTTTTTTCTCCCTCATATTTCTCTTCGACAAAAGAAAGCTCCACCCTACGCATATTCCATTTCTAATCGTTCGTTTGCTCGAGTCGATTCCAGCAACCGTCGTCTGCTCACAGCGTCCGCCACAAGTTCGATTGATCTTCTCAAGTTGCTGTTGTTTCTGCCCTTTTCCCGTCTGATCTCCTCAAGTCACCACCGTCATCTGCTCACAGCATCCGCCACCAGTTCGATCGATCTCCTCAAACTGCTACCATTTTTACCCTTTTCCAGTATGATCTTCTCAAGTCGTCGTCGTCTGCTCGTTGTGTTCACTGGTTCGTCCGCCACCAGTTGCATCCGTCATCATTTTTGCTCGTTACAACCACAACCATCACCAGATTAATGTATCACTTGGGAATGGCTATGGCGGCCACTACCCTTTCGAACCTGCCTTTTGTCCTCTTCCATGGAAATTCACGCAAAAATGAATTTAGGGGGAAGGATGTGGTTATGTGTTGTGGAACTTGTTGTTTATGGGGCAATCCTATGAAATATTTGTGTGGATGCCAATCAACTGACTTTGGTGAACCAAAAACAAAAAGAAATCTTCTTGACAATGCTAGCAATCTTCTTACCAATTTGTTAAGTGGTGGAAATTTGGGATCTAGGTCGATAGCTGAAGGCTTGGTTGAAATAGATCCAAACAAAAGAATGCCGCATTTCACCTCGGAGAGAAGAGGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAACTGCACTGCCCACCAAGAGGTTTGTTCAAGAAATCTAGGGTAGAGACTACTATGGCTCATAAGGTAGACCACGAGTATGACTATTTGTTCAAGATTGTTTCGATTGGGGATTCCGGCGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTCTACTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAGATAAACAAGTTTTGTTGATACTAGATATAAGAGAACTAGTTTTGTTGATATTTTTTTAATACTGGATATAGGTGAACTAGTTTTGTTGATATTGGATATAAGTAAAAGACAACTTTTGATATGGTATACCTTTAGGCTACACATATATTTTGTTTATACCGACATATAGATGGAATGTTTAGGCTATTGTTAGAAGTTTGTAATGACCAACTAATATATGTATGATTCATTGATATATATA

Coding sequence (CDS)

ATGTATCACTTGGGAATGGCTATGGCGGCCACTACCCTTTCGAACCTGCCTTTTGTCCTCTTCCATGGAAATTCACGCAAAAATGAATTTAGGGGGAAGGATGTGGTTATGTGTTGTGGAACTTGTTGTTTATGGGGCAATCCTATGAAATATTTGTGTGGATGCCAATCAACTGACTTTGGTGAACCAAAAACAAAAAGAAATCTTCTTGACAATGCTAGCAATCTTCTTACCAATTTGTTAAGTGGTGGAAATTTGGGATCTAGGTCGATAGCTGAAGGCTTGGTTGAAATAGATCCAAACAAAAGAATGCCGCATTTCACCTCGGAGAGAAGAGGAAATGAAACAAATTTTTGCTCTTATGGCAAAGTAAACAGAGAAGTTCAACTGCACTGCCCACCAAGAGGTTTGTTCAAGAAATCTAGGGTAGAGACTACTATGGCTCATAAGGTAGACCACGAGTATGACTATTTGTTCAAGATTGTTTCGATTGGGGATTCCGGCGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTCTACTTGGAGTCCAAATCCACCATTGATCTTTTGGGTTAG

Protein sequence

MYHLGMAMAATTLSNLPFVLFHGNSRKNEFRGKDVVMCCGTCCLWGNPMKYLCGCQSTDFGEPKTKRNLLDNASNLLTNLLSGGNLGSRSIAEGLVEIDPNKRMPHFTSERRGNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG

Homology

[Close]

BLAST of MELO3C034744 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-16
Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 147 MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI 192
           MAH+VDHEYDYLFKIV IGDSGVGKSNILSRFTRNEF LESKSTI
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of MELO3C034744 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.5e-16
Identity = 41/45 (91.11%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 147 MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI 192
           MA++VDHEYDYLFKIV IGDSGVGKSNILSRFTRNEF LESKSTI
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of MELO3C034744 vs. ExPASy Swiss-Prot
Match: Q9LNW1 (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 147 MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI 192
           MA+++DHEYDYLFKIV IGDSGVGKSNILSRFTRNEF LESKSTI
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of MELO3C034744 vs. ExPASy Swiss-Prot
Match: Q40523 (Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.1e-15
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 147 MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI 192
           MA++VDHEYDYLFK+V IGDSGVGKSNILSRFTRNEF LESKSTI
Sbjct: 1   MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of MELO3C034744 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-15
Identity = 40/45 (88.89%), Postives = 41/45 (91.11%), Query Frame = 0


Query: 147 MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI 192
           M H+VD EYDYLFKIV IGDSGVGKSNILSRFTRNEF LESKSTI
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of MELO3C034744 vs. NCBI nr
Match: XP_008448132.1 (PREDICTED: ras-related protein Rab11C-like [Cucumis melo])

HSP 1 Score: 174.9 bits (442), Expect = 6.9e-40
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 112 RGNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGK 171
           R NETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGK
Sbjct: 6   RRNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGK 65

Query: 172 SNILSRFTRNEFYLESKSTIDLLG 196
           SNILSRFTRNEFYLESKSTIDLLG
Sbjct: 66  SNILSRFTRNEFYLESKSTIDLLG 89

[Close]

BLAST of MELO3C034744 vs. NCBI nr
Match: XP_008461756.1 (PREDICTED: ras-related protein Rab11C-like isoform X2 [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-35
Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 114 NETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSN 173
           NETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSN
Sbjct: 7   NETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSN 66

Query: 174 ILSRFTRNEFYLESKSTIDLLG 196
           ILSRFTRNEF LESKSTIDLLG
Sbjct: 67  ILSRFTRNEFCLESKSTIDLLG 88

[Close]

BLAST of MELO3C034744 vs. NCBI nr
Match: KAA0052805.1 (ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa] >TYK04163.1 ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-35
Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 114 NETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSN 173
           NETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSN
Sbjct: 98  NETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSN 157

Query: 174 ILSRFTRNEFYLESKSTIDLLG 196
           ILSRFTRNEF LESKSTIDLLG
Sbjct: 158 ILSRFTRNEFCLESKSTIDLLG 179

[Close]

BLAST of MELO3C034744 vs. NCBI nr
Match: XP_008461753.1 (PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo] >XP_008461755.1 PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-35
Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 114 NETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSN 173
           NETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSN
Sbjct: 8   NETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSN 67

Query: 174 ILSRFTRNEFYLESKSTIDLLG 196
           ILSRFTRNEF LESKSTIDLLG
Sbjct: 68  ILSRFTRNEFCLESKSTIDLLG 89

[Close]

BLAST of MELO3C034744 vs. NCBI nr
Match: TYK01106.1 (ras-related protein Rab11C-like [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 136 GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG 195
           GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
Sbjct: 30  GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG 89

[Close]

BLAST of MELO3C034744 vs. ExPASy TrEMBL
Match: A0A1S3BJ02 (ras-related protein Rab11C-like OS=Cucumis melo OX=3656 GN=LOC103490420 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 3.4e-40
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0


Query: 112 RGNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGK 171
           R NETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGK
Sbjct: 6   RRNETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGK 65

Query: 172 SNILSRFTRNEFYLESKSTIDLLG 196
           SNILSRFTRNEFYLESKSTIDLLG
Sbjct: 66  SNILSRFTRNEFYLESKSTIDLLG 89

[Close]

BLAST of MELO3C034744 vs. ExPASy TrEMBL
Match: A0A1S3CFF6 (ras-related protein Rab11C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500284 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 6.6e-36
Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 114 NETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSN 173
           NETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSN
Sbjct: 8   NETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSN 67

Query: 174 ILSRFTRNEFYLESKSTIDLLG 196
           ILSRFTRNEF LESKSTIDLLG
Sbjct: 68  ILSRFTRNEFCLESKSTIDLLG 89

[Close]

BLAST of MELO3C034744 vs. ExPASy TrEMBL
Match: A0A5A7UGE0 (Ras-related protein Rab11C-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00340 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 6.6e-36
Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 114 NETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSN 173
           NETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSN
Sbjct: 98  NETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSN 157

Query: 174 ILSRFTRNEFYLESKSTIDLLG 196
           ILSRFTRNEF LESKSTIDLLG
Sbjct: 158 ILSRFTRNEFCLESKSTIDLLG 179

[Close]

BLAST of MELO3C034744 vs. ExPASy TrEMBL
Match: A0A1S3CFW6 (ras-related protein Rab11C-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500284 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 6.6e-36
Identity = 76/82 (92.68%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 114 NETNFCSYGKVNREVQLHCPPRGLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSN 173
           NETNFCSYGKVNREVQ+HCPPRGLFKKSR ET MAHKVDHEYDYLFKIV IGDS VGKSN
Sbjct: 7   NETNFCSYGKVNREVQVHCPPRGLFKKSRAETAMAHKVDHEYDYLFKIVLIGDSDVGKSN 66

Query: 174 ILSRFTRNEFYLESKSTIDLLG 196
           ILSRFTRNEF LESKSTIDLLG
Sbjct: 67  ILSRFTRNEFCLESKSTIDLLG 88

[Close]

BLAST of MELO3C034744 vs. ExPASy TrEMBL
Match: A0A5D3BS78 (Ras-related protein Rab11C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001340 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 6.8e-25
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 136 GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG 195
           GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG
Sbjct: 30  GLFKKSRVETTMAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTIDLLG 89

[Close]

BLAST of MELO3C034744 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 84.7 bits (208), Expect = 8.8e-17
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 147 MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI 192
           MA+++DHEYDYLFKIV IGDSGVGKSNILSRFTRNEF LESKSTI
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of MELO3C034744 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-16
Identity = 40/45 (88.89%), Postives = 41/45 (91.11%), Query Frame = 0


Query: 147 MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI 192
           M H+VD EYDYLFKIV IGDSGVGKSNILSRFTRNEF LESKSTI
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of MELO3C034744 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 38/45 (84.44%), Postives = 42/45 (93.33%), Query Frame = 0


Query: 147 MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI 192
           MAH+V+ +YDYLFKIV IGDSGVGK+NILSRFTRNEF LESKSTI
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTI 45

[Close]

BLAST of MELO3C034744 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 78.2 bits (191), Expect = 8.2e-15
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0


Query: 147 MAHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI 192
           MA + D EYDYLFK+V IGDSGVGKSN+LSRFTRNEF LESKSTI
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTI 45

[Close]

BLAST of MELO3C034744 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-14
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 0


Query: 148 AHKVDHEYDYLFKIVSIGDSGVGKSNILSRFTRNEFYLESKSTI 192
           A++ D EYDYLFK+V IGDSGVGKSN+LSRFTRNEF LESKSTI
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTI 46

The following BLAST results are available for this feature:

BLAST of MELO3C034744 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40193	1.5e-16	93.33	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
Q39434	9.5e-16	91.11	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
Q9LNW1	1.2e-15	88.89	Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2	[more]
Q40523	2.1e-15	88.89	Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1	[more]
Q96283	3.6e-15	88.89	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]

BLAST of MELO3C034744 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448132.1	6.9e-40	98.81	PREDICTED: ras-related protein Rab11C-like [Cucumis melo]	[more]
XP_008461756.1	1.4e-35	92.68	PREDICTED: ras-related protein Rab11C-like isoform X2 [Cucumis melo]	[more]
KAA0052805.1	1.4e-35	92.68	ras-related protein Rab11C-like isoform X2 [Cucumis melo var. makuwa] >TYK04163....	[more]
XP_008461753.1	1.4e-35	92.68	PREDICTED: ras-related protein Rab11C-like isoform X1 [Cucumis melo] >XP_0084617...	[more]
TYK01106.1	1.4e-24	100.00	ras-related protein Rab11C-like [Cucumis melo var. makuwa]	[more]

BLAST of MELO3C034744 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BJ02	3.4e-40	98.81	ras-related protein Rab11C-like OS=Cucumis melo OX=3656 GN=LOC103490420 PE=4 SV=...	[more]
A0A1S3CFF6	6.6e-36	92.68	ras-related protein Rab11C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035002...	[more]
A0A5A7UGE0	6.6e-36	92.68	Ras-related protein Rab11C-like isoform X2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CFW6	6.6e-36	92.68	ras-related protein Rab11C-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035002...	[more]
A0A5D3BS78	6.8e-25	100.00	Ras-related protein Rab11C-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of MELO3C034744 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07410.1	8.8e-17	88.89	RAB GTPase homolog A2B	[more]
AT3G46830.1	2.6e-16	88.89	RAB GTPase homolog A2C	[more]
AT5G59150.1	1.3e-15	84.44	RAB GTPase homolog A2D	[more]
AT1G09630.1	8.2e-15	82.22	RAB GTPase 11C	[more]
AT5G60860.1	1.4e-14	81.82	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 160..191 e-value: 8.5E-7 score: 28.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 145..193 e-value: 9.3E-10 score: 39.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 155..192
None	No IPR available	PANTHER	PTHR47979:SF63	RAS-RELATED PROTEIN RAB11C	coord: 147..191
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 147..191
None	No IPR available	PROSITE	PS51419	RAB	coord: 154..195 score: 8.814028

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C034744.1	MELO3C034744.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding