Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACATGTTCGAGCGAAAGAAGCTGAACTTAATGAAGTTTACCATAATGTGGAAGAAGTGCCTCCTACGACACAAACACAGAGCCAAATTGGTTATGATAGTCCGATGACGATGATGCCAACATTTGGAGCATGATATTGTGATTCTGAGGTCGGTACAGGATAATATGATGCAGCGGTCGGTCCATCTAATTCTTACATGCATGGACATGAACGTGGCTATGAGAAACATAACGAATATTTGTATCATGAAGCACCTGCAAATGTATCATATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAAAACATAAAGTTCAG
mRNA sequence
ATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACATGTTCGAGCGAAAGAAGCTGAACTTAATGAAGTTTACCATAATGTGGAAGAAGTGCCTCCTACGACACAAACACAGAGCCAAATTGGTTATGATAGTCCGATGACGATGATGCCAACATTTGGAGCATGATATTGTGATTCTGAGGTCGGTACAGGATAATATGATGCAGCGGTCGGTCCATCTAATTCTTACATGCATGGACATGAACGTGGCTATGAGAAACATAACGAATATTTGTATCATGAAGCACCTGCAAATGTATCATATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAAAACATAAAGTTCAG
Coding sequence (CDS)
ATGTACGATCTACCTATTGTACCTCCACCAGTTCATAGGGGACATGTTCGAGCGAAAGAAGCTGAACTTAATGAAGTTTACCATAATGTGGAAGAAGTGCCTCCTACGACACAAACACAGAGCCAAATTGGTTATGATAGTCCGATGACGATGATGCCAACATTTGGAGCATGA
Protein sequence
MYDLPIVPPPVHRGHVRAKEAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA
Homology
BLAST of MELO3C032958.jh1 vs. NCBI nr
Match:
KAA0062732.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK22530.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 121 bits (303), Expect = 3.49e-34
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0
Query: 1 MYDLPIVPPPVHRGHVRAKEAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA 57
MYDLPIVPPPVHRGHVRAK+AELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA
Sbjct: 36 MYDLPIVPPPVHRGHVRAKQAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA 92
BLAST of MELO3C032958.jh1 vs. NCBI nr
Match:
TYK16354.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 104 bits (260), Expect = 2.36e-27
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 0
Query: 1 MYDLPIVPPPVHRGHVRAKEAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA 57
MYDLPIVP PVHRG VR +EAEL+EVYHNVEEVPPTTQTQSQ GY PMTMMPTFGA
Sbjct: 1 MYDLPIVPQPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGRPMTMMPTFGA 57
BLAST of MELO3C032958.jh1 vs. NCBI nr
Match:
KAA0061327.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 103 bits (257), Expect = 6.76e-27
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 0
Query: 1 MYDLPIVPPPVHRGHVRAKEAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA 57
MYDLPIVP PVHRG VR +EAEL+EVYHNVEEV PTTQTQSQ GY SPMTMMPTFGA
Sbjct: 1 MYDLPIVPQPVHRGRVRVEEAELDEVYHNVEEVSPTTQTQSQTGYGSPMTMMPTFGA 57
BLAST of MELO3C032958.jh1 vs. NCBI nr
Match:
KAA0062992.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 103 bits (257), Expect = 6.76e-27
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 0
Query: 1 MYDLPIVPPPVHRGHVRAKEAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA 57
MYDLPIVP PVHRG VR +EAEL+EVYHNVEEV PTTQTQSQ GY SPMTMMPTFGA
Sbjct: 1 MYDLPIVPQPVHRGRVRVEEAELDEVYHNVEEVSPTTQTQSQTGYGSPMTMMPTFGA 57
BLAST of MELO3C032958.jh1 vs. NCBI nr
Match:
TYK11193.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 106 bits (265), Expect = 3.53e-26
Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = 0
Query: 1 MYDLPIVPPPVHRGHVRAKEAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA 57
MYDL IVPPPVHRG VR +EAEL+EVYHNVEEVPPTTQTQSQ GY SPMTMMPTFGA
Sbjct: 173 MYDLSIVPPPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPTFGA 229
BLAST of MELO3C032958.jh1 vs. ExPASy TrEMBL
Match:
A0A5D3DGQ9 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00120 PE=4 SV=1)
HSP 1 Score: 121 bits (303), Expect = 1.69e-34
Identity = 56/57 (98.25%), Postives = 57/57 (100.00%), Query Frame = 0
Query: 1 MYDLPIVPPPVHRGHVRAKEAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA 57
MYDLPIVPPPVHRGHVRAK+AELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA
Sbjct: 36 MYDLPIVPPPVHRGHVRAKQAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA 92
BLAST of MELO3C032958.jh1 vs. ExPASy TrEMBL
Match:
A0A5D3CZG9 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001380 PE=4 SV=1)
HSP 1 Score: 104 bits (260), Expect = 1.14e-27
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 0
Query: 1 MYDLPIVPPPVHRGHVRAKEAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA 57
MYDLPIVP PVHRG VR +EAEL+EVYHNVEEVPPTTQTQSQ GY PMTMMPTFGA
Sbjct: 1 MYDLPIVPQPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGRPMTMMPTFGA 57
BLAST of MELO3C032958.jh1 vs. ExPASy TrEMBL
Match:
A0A5A7V379 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29891G00010 PE=4 SV=1)
HSP 1 Score: 103 bits (257), Expect = 3.27e-27
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 0
Query: 1 MYDLPIVPPPVHRGHVRAKEAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA 57
MYDLPIVP PVHRG VR +EAEL+EVYHNVEEV PTTQTQSQ GY SPMTMMPTFGA
Sbjct: 1 MYDLPIVPQPVHRGRVRVEEAELDEVYHNVEEVSPTTQTQSQTGYGSPMTMMPTFGA 57
BLAST of MELO3C032958.jh1 vs. ExPASy TrEMBL
Match:
A0A5A7V422 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00920 PE=4 SV=1)
HSP 1 Score: 103 bits (257), Expect = 3.27e-27
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 0
Query: 1 MYDLPIVPPPVHRGHVRAKEAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA 57
MYDLPIVP PVHRG VR +EAEL+EVYHNVEEV PTTQTQSQ GY SPMTMMPTFGA
Sbjct: 1 MYDLPIVPQPVHRGRVRVEEAELDEVYHNVEEVSPTTQTQSQTGYGSPMTMMPTFGA 57
BLAST of MELO3C032958.jh1 vs. ExPASy TrEMBL
Match:
A0A5D3CH23 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00320 PE=4 SV=1)
HSP 1 Score: 106 bits (265), Expect = 1.71e-26
Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = 0
Query: 1 MYDLPIVPPPVHRGHVRAKEAELNEVYHNVEEVPPTTQTQSQIGYDSPMTMMPTFGA 57
MYDL IVPPPVHRG VR +EAEL+EVYHNVEEVPPTTQTQSQ GY SPMTMMPTFGA
Sbjct: 173 MYDLSIVPPPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTMMPTFGA 229
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0062732.1 | 3.49e-34 | 98.25 | GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... | [more] |
| TYK16354.1 | 2.36e-27 | 85.96 | GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... | [more] |
| KAA0061327.1 | 6.76e-27 | 85.96 | GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... | [more] |
| KAA0062992.1 | 6.76e-27 | 85.96 | GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var.... | [more] |
| TYK11193.1 | 3.53e-26 | 87.72 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DGQ9 | 1.69e-34 | 98.25 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... | [more] |
| A0A5D3CZG9 | 1.14e-27 | 85.96 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... | [more] |
| A0A5A7V379 | 3.27e-27 | 85.96 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... | [more] |
| A0A5A7V422 | 3.27e-27 | 85.96 | GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo va... | [more] |
| A0A5D3CH23 | 1.71e-26 | 87.72 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
