MELO3C032795 (gene) Melon (DHL92) v4

Overview
NameMELO3C032795
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Locationchr09: 5819197 .. 5820216 (-)
RNA-Seq ExpressionMELO3C032795
SyntenyMELO3C032795
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTATGTCAACCTCAAATCGTGCCCCGAGACATGTTTGGACGAAGGAGGAGGAGGGGACTCTTGTGGAATGTTTAATGGAGCTAGTGTCAATGGGGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGTACGAGCAACAACTGTAATTGATTGTAGGATCAAGACACTGAAGCGAACGTTTCAGGCCATTGCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTGCGGAGAAGGAATTATTTGATAATTGGGTTAGGGTATGGAATATAATTTAAATGTCACACAACGTTCACAATGTACATTTACTTAACAATTTTTGAATCAGTACTCATACGTGATTTTTTTTTGCCCGCAGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCATTCCCGTATTACGACGAACTTACATATGTATTCGGTCGCGATAGGGCGACTGGTCGGTTCATTGAGACATTCGCGGACGTGGGGTCTAATGAGCCTGGTGGTGGATATGACAGATTTGATAAGGGGGATGGAAACGAGGACTTCACGCCCGTGTACAGCCAGGGAGTTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGAGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGACGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCTGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAGAGAGAGGGATTCTGTAGAGTCCTCCTACGGGACATAGAGAGATAG

mRNA sequence

AGTATGTCAACCTCAAATCGTGCCCCGAGACATGTTTGGACGAAGGAGGAGGAGGGGACTCTTGTGGAATGTTTAATGGAGCTAGTGTCAATGGGGGATGGAAATCAGATAATGGTACGTTCCGCCCAGGATACCTTGCGCAGTTGGTACGCATGATGGCGGAGAAACTACCTGGATGTCAGGCCATTGCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTGCGGAGAAGGAATTATTTGATAATTGGGTTAGGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCATTCCCGTATTACGACGAACTTACATATGTATTCGGTCGCGATAGGGCGACTGGTCGGTTCATTGAGACATTCGCGGACGTGGGGTCTAATGAGCCTGGTGGTGGATATGACAGATTTGATAAGGGGGATGGAAACGAGGACTTCACGCCCGTGTACAGCCAGGGAGTTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGAGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGACGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCTGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAGAGAGAGGGATTCTGTAGAGTCCTCCTACGGGACATAGAGAGATAG

Coding sequence (CDS)

ATGTCAGGCCATTGCGAAATGCGGGGCCCAGCGTGCAGTGGCTTTGGGTGGAACGATGAAGAGAAATGTATCATTGCGGAGAAGGAATTATTTGATAATTGGGTTAGGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAACCATTCCCGTATTACGACGAACTTACATATGTATTCGGTCGCGATAGGGCGACTGGTCGGTTCATTGAGACATTCGCGGACGTGGGGTCTAATGAGCCTGGTGGTGGATATGACAGATTTGATAAGGGGGATGGAAACGAGGACTTCACGCCCGTGTACAGCCAGGGAGTTGACCTCTCGCAGGACGATGTACGTGCATCCCGACCTTCTCGAGCTTCAGAGGGTAGGACCGGATCAAGTGGATCGAAGAGGAAGAGGGGAAGTCAGCGAGACTTCGAGCTTGAAGCGATACATCTGACGCTCGACCAAACAAACGAGCAACTCAGGCAGATTGCGGAGTGGCCAGCACGCAACCTTGCAAATGACAACCACGTGCGCACGGAATTTTTCTGCATATTGCGTGAGATGCCAGAACTTACGAGTTTGGATAGGGCGTTATTGCAAAGGCATCTTTTGTCTCGTATGGACGACCTTCGGGGTTTCGTACTCATGCCTGAGGATGAGAGAGAGGGATTCTGTAGAGTCCTCCTACGGGACATAGAGAGATAG

Protein sequence

MSGHCEMRGPACSGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRFIETFADVGSNEPGGGYDRFDKGDGNEDFTPVYSQGVDLSQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLTLDQTNEQLRQIAEWPARNLANDNHVRTEFFCILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Homology
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BLAST of MELO3C032795 vs. NCBI nr
Match: TYK10915.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 446.8 bits (1148), Expect = 1.1e-121
Identity = 217/224 (96.88%), Postives = 219/224 (97.77%), Query Frame = 0 

Query: 6   EMRGPACSGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 65
           EMRGPACSGFGWNDEEKCI+AEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT
Sbjct: 33  EMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 92

Query: 66  GRFIETFADVGSNEPGGGYDRFDKGDGNEDFTPVYSQGVDLSQDDVRASRPSRASEGRTG 125
           GRF ETFADVGSNEPGGGYDRFD GDGNEDF PVYSQGVD+SQDDVRASRPSRASEGRTG
Sbjct: 93  GRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTG 152

Query: 126 SSGSKRKRGSQRDFELEAIHLTLDQTNEQLRQIAEWPARNLANDNHVRTEFFCILREMPE 185
           SSGSKRKRGSQRDFELEAIHL LDQTNEQLRQIAEWPARNLANDNHVRTEFF ILREMPE
Sbjct: 153 SSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPE 212

Query: 186 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 230
           LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Sbjct: 213 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 256

[Close]
BLAST of MELO3C032795 vs. NCBI nr
Match: KAA0032766.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 446.8 bits (1148), Expect = 1.1e-121
Identity = 217/224 (96.88%), Postives = 219/224 (97.77%), Query Frame = 0 

Query: 6   EMRGPACSGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 65
           EMRGPACSGFGWNDEEKCI+AEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT
Sbjct: 83  EMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 142

Query: 66  GRFIETFADVGSNEPGGGYDRFDKGDGNEDFTPVYSQGVDLSQDDVRASRPSRASEGRTG 125
           GRF ETFADVGSNEPGGGYDRFD GDGNEDF PVYSQGVD+SQDDVRASRPSRASEGRTG
Sbjct: 143 GRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTG 202

Query: 126 SSGSKRKRGSQRDFELEAIHLTLDQTNEQLRQIAEWPARNLANDNHVRTEFFCILREMPE 185
           SSGSKRKRGSQRDFELEAIHL LDQTNEQLRQIAEWPARNLANDNHVRTEFF ILREMPE
Sbjct: 203 SSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPE 262

Query: 186 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 230
           LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Sbjct: 263 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C032795 vs. NCBI nr
Match: TYK21395.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK24245.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 446.8 bits (1148), Expect = 1.1e-121
Identity = 217/224 (96.88%), Postives = 219/224 (97.77%), Query Frame = 0 

Query: 6   EMRGPACSGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 65
           EMRGPACSGFGWNDEEKCI+AEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT
Sbjct: 83  EMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 142

Query: 66  GRFIETFADVGSNEPGGGYDRFDKGDGNEDFTPVYSQGVDLSQDDVRASRPSRASEGRTG 125
           GRF ETFADVGSNEPGGGYDRFD GDGNEDF PVYSQGVD+SQDDVRASRPSRASEGRTG
Sbjct: 143 GRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTG 202

Query: 126 SSGSKRKRGSQRDFELEAIHLTLDQTNEQLRQIAEWPARNLANDNHVRTEFFCILREMPE 185
           SSGSKRKRGSQRDFELEAIHL LDQTNEQLRQIAEWPARNLANDNHVRTEFF ILREMPE
Sbjct: 203 SSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPE 262

Query: 186 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 230
           LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Sbjct: 263 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C032795 vs. NCBI nr
Match: KAA0038975.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 446.0 bits (1146), Expect = 1.9e-121
Identity = 216/224 (96.43%), Postives = 220/224 (98.21%), Query Frame = 0 

Query: 6   EMRGPACSGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 65
           EMRGPACSGFGWNDEEKCI+AEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT
Sbjct: 83  EMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 142

Query: 66  GRFIETFADVGSNEPGGGYDRFDKGDGNEDFTPVYSQGVDLSQDDVRASRPSRASEGRTG 125
           GRF ETFADVGSNEPGGGYDRFD GDGNEDF+PVYSQGVD+SQDDVRASRPSRASEGRTG
Sbjct: 143 GRFAETFADVGSNEPGGGYDRFDMGDGNEDFSPVYSQGVDISQDDVRASRPSRASEGRTG 202

Query: 126 SSGSKRKRGSQRDFELEAIHLTLDQTNEQLRQIAEWPARNLANDNHVRTEFFCILREMPE 185
           SSGSKRKRGSQRDFELEAIHL LDQTNEQLRQIAEWPARNLANDNHVRTEFF ILREMPE
Sbjct: 203 SSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPE 262

Query: 186 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 230
           LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLL+DIER
Sbjct: 263 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLQDIER 306

[Close]
BLAST of MELO3C032795 vs. NCBI nr
Match: KAA0033744.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0044866.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0046274.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0049705.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0057135.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 445.7 bits (1145), Expect = 2.5e-121
Identity = 216/224 (96.43%), Postives = 219/224 (97.77%), Query Frame = 0 

Query: 6   EMRGPACSGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 65
           EMRGPACSGFGWNDEEKCI+AEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT
Sbjct: 83  EMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 142

Query: 66  GRFIETFADVGSNEPGGGYDRFDKGDGNEDFTPVYSQGVDLSQDDVRASRPSRASEGRTG 125
           GRF ETFADVGSNEPGGGYDRFD GDGNEDF PVYSQGVD+SQDDVRASRPSRASEGRTG
Sbjct: 143 GRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTG 202

Query: 126 SSGSKRKRGSQRDFELEAIHLTLDQTNEQLRQIAEWPARNLANDNHVRTEFFCILREMPE 185
           SSGSKRKRGSQRDFELEAIHL LDQTNEQLR+IAEWPARNLANDNHVRTEFF ILREMPE
Sbjct: 203 SSGSKRKRGSQRDFELEAIHLALDQTNEQLREIAEWPARNLANDNHVRTEFFRILREMPE 262

Query: 186 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 230
           LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Sbjct: 263 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C032795 vs. ExPASy TrEMBL
Match: A0A5D3DCZ1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00020 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 5.4e-122
Identity = 217/224 (96.88%), Postives = 219/224 (97.77%), Query Frame = 0 

Query: 6   EMRGPACSGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 65
           EMRGPACSGFGWNDEEKCI+AEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT
Sbjct: 83  EMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 142

Query: 66  GRFIETFADVGSNEPGGGYDRFDKGDGNEDFTPVYSQGVDLSQDDVRASRPSRASEGRTG 125
           GRF ETFADVGSNEPGGGYDRFD GDGNEDF PVYSQGVD+SQDDVRASRPSRASEGRTG
Sbjct: 143 GRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTG 202

Query: 126 SSGSKRKRGSQRDFELEAIHLTLDQTNEQLRQIAEWPARNLANDNHVRTEFFCILREMPE 185
           SSGSKRKRGSQRDFELEAIHL LDQTNEQLRQIAEWPARNLANDNHVRTEFF ILREMPE
Sbjct: 203 SSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPE 262

Query: 186 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 230
           LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Sbjct: 263 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C032795 vs. ExPASy TrEMBL
Match: A0A5D3CHA0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00970 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 5.4e-122
Identity = 217/224 (96.88%), Postives = 219/224 (97.77%), Query Frame = 0 

Query: 6   EMRGPACSGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 65
           EMRGPACSGFGWNDEEKCI+AEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT
Sbjct: 33  EMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 92

Query: 66  GRFIETFADVGSNEPGGGYDRFDKGDGNEDFTPVYSQGVDLSQDDVRASRPSRASEGRTG 125
           GRF ETFADVGSNEPGGGYDRFD GDGNEDF PVYSQGVD+SQDDVRASRPSRASEGRTG
Sbjct: 93  GRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTG 152

Query: 126 SSGSKRKRGSQRDFELEAIHLTLDQTNEQLRQIAEWPARNLANDNHVRTEFFCILREMPE 185
           SSGSKRKRGSQRDFELEAIHL LDQTNEQLRQIAEWPARNLANDNHVRTEFF ILREMPE
Sbjct: 153 SSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPE 212

Query: 186 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 230
           LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Sbjct: 213 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 256

[Close]
BLAST of MELO3C032795 vs. ExPASy TrEMBL
Match: A0A5A7SRU1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold708G00100 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 5.4e-122
Identity = 217/224 (96.88%), Postives = 219/224 (97.77%), Query Frame = 0 

Query: 6   EMRGPACSGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 65
           EMRGPACSGFGWNDEEKCI+AEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT
Sbjct: 83  EMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 142

Query: 66  GRFIETFADVGSNEPGGGYDRFDKGDGNEDFTPVYSQGVDLSQDDVRASRPSRASEGRTG 125
           GRF ETFADVGSNEPGGGYDRFD GDGNEDF PVYSQGVD+SQDDVRASRPSRASEGRTG
Sbjct: 143 GRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTG 202

Query: 126 SSGSKRKRGSQRDFELEAIHLTLDQTNEQLRQIAEWPARNLANDNHVRTEFFCILREMPE 185
           SSGSKRKRGSQRDFELEAIHL LDQTNEQLRQIAEWPARNLANDNHVRTEFF ILREMPE
Sbjct: 203 SSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPE 262

Query: 186 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 230
           LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Sbjct: 263 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C032795 vs. ExPASy TrEMBL
Match: A0A5A7TC56 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00560 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 9.2e-122
Identity = 216/224 (96.43%), Postives = 220/224 (98.21%), Query Frame = 0 

Query: 6   EMRGPACSGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 65
           EMRGPACSGFGWNDEEKCI+AEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT
Sbjct: 83  EMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 142

Query: 66  GRFIETFADVGSNEPGGGYDRFDKGDGNEDFTPVYSQGVDLSQDDVRASRPSRASEGRTG 125
           GRF ETFADVGSNEPGGGYDRFD GDGNEDF+PVYSQGVD+SQDDVRASRPSRASEGRTG
Sbjct: 143 GRFAETFADVGSNEPGGGYDRFDMGDGNEDFSPVYSQGVDISQDDVRASRPSRASEGRTG 202

Query: 126 SSGSKRKRGSQRDFELEAIHLTLDQTNEQLRQIAEWPARNLANDNHVRTEFFCILREMPE 185
           SSGSKRKRGSQRDFELEAIHL LDQTNEQLRQIAEWPARNLANDNHVRTEFF ILREMPE
Sbjct: 203 SSGSKRKRGSQRDFELEAIHLALDQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPE 262

Query: 186 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 230
           LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLL+DIER
Sbjct: 263 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLQDIER 306

[Close]
BLAST of MELO3C032795 vs. ExPASy TrEMBL
Match: A0A5A7TRV1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold153G00290 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.2e-121
Identity = 216/224 (96.43%), Postives = 219/224 (97.77%), Query Frame = 0 

Query: 6   EMRGPACSGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 65
           EMRGPACSGFGWNDEEKCI+AEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT
Sbjct: 83  EMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRAT 142

Query: 66  GRFIETFADVGSNEPGGGYDRFDKGDGNEDFTPVYSQGVDLSQDDVRASRPSRASEGRTG 125
           GRF ETFADVGSNEPGGGYDRFD GDGNEDF PVYSQGVD+SQDDVRASRPSRASEGRTG
Sbjct: 143 GRFAETFADVGSNEPGGGYDRFDMGDGNEDFPPVYSQGVDISQDDVRASRPSRASEGRTG 202

Query: 126 SSGSKRKRGSQRDFELEAIHLTLDQTNEQLRQIAEWPARNLANDNHVRTEFFCILREMPE 185
           SSGSKRKRGSQRDFELEAIHL LDQTNEQLR+IAEWPARNLANDNHVRTEFF ILREMPE
Sbjct: 203 SSGSKRKRGSQRDFELEAIHLALDQTNEQLREIAEWPARNLANDNHVRTEFFRILREMPE 262

Query: 186 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 230
           LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER
Sbjct: 263 LTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRDIER 306

[Close]
BLAST of MELO3C032795 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-06
Identity = 16/56 (28.57%), Postives = 35/56 (62.50%), Query Frame = 0 

Query: 13  SGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGRF 69
           +GF W+     +IA+ ++++ ++++HP A+    K  P Y  L ++FG++ + GR+
Sbjct: 399 NGFSWDARRDMVIADDDIWNTYIQAHPEARSYRVKTIPSYPNLCFIFGKETSDGRY 454

[Close]
BLAST of MELO3C032795 vs. TAIR 10
Match: AT5G27260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G29880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 2.8e-06
Identity = 21/55 (38.18%), Postives = 33/55 (60.00%), Query Frame = 0 

Query: 13  SGFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFGRDRATGR 68
           SGFGW+   K   A  E++ +++++HP  K L    F ++DEL  +FG   ATG+
Sbjct: 92  SGFGWDPLTKRFTASDEVWSDYLKAHPNNKQLRYDTFEFFDELQIIFGEGVATGK 146

[Close]
BLAST of MELO3C032795 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 13/47 (27.66%), Postives = 30/47 (63.83%), Query Frame = 0 

Query: 14  GFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFG 61
           GF W++E + + A+  ++ +++++H  A+  + +P PYY +L  + G
Sbjct: 259 GFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVLCG 305

[Close]
BLAST of MELO3C032795 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). )

HSP 1 Score: 44.3 bits (103), Expect = 1.5e-04
Identity = 13/47 (27.66%), Postives = 30/47 (63.83%), Query Frame = 0 

Query: 14  GFGWNDEEKCIIAEKELFDNWVRSHPAAKGLLNKPFPYYDELTYVFG 61
           GF W++E + + A+  ++ +++++H  A+  + +P PYY +L  + G
Sbjct: 259 GFAWDNERQMVTADNNVWQDYIKAHRDARQFMTRPIPYYKDLCVLCG 305

The following BLAST results are available for this feature:
BLAST of MELO3C032795 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK10915.11.1e-12196.88retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon p... [more]
KAA0032766.11.1e-12196.88retrotransposon protein [Cucumis melo var. makuwa][more]
TYK21395.11.1e-12196.88retrotransposon protein [Cucumis melo var. makuwa] >TYK24245.1 retrotransposon p... [more]
KAA0038975.11.9e-12196.43retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0033744.12.5e-12196.43retrotransposon protein [Cucumis melo var. makuwa] >KAA0044866.1 retrotransposon... [more]
BLAST of MELO3C032795 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C032795 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DCZ15.4e-12296.88Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CHA05.4e-12296.88Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SRU15.4e-12296.88Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TC569.2e-12296.43Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TRV11.2e-12196.43Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO3C032795 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G24960.21.7e-0628.57unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G27260.12.8e-0638.18unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.11.5e-0427.66unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02210.21.5e-0427.66unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..136
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 6..221
NoneNo IPR availablePANTHERPTHR46250:SF3MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEINcoord: 6..221

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032795.1MELO3C032795.1mRNA