MELO3C032403 (gene) Melon (DHL92) v4

Overview
NameMELO3C032403
Typegene
OrganismCucumis melo cv. DHL92 (Melon (DHL92) v4)
DescriptionHistidine-rich glycoprotein-like
Locationchr07: 6815193 .. 6815615 (+)
RNA-Seq ExpressionMELO3C032403
SyntenyMELO3C032403
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CATAAGTGGAGCTGCACCATCGTTATCATCTTAAAGACACGGAGGCAAAGTTGTACCATCATTGTCATCTTGGAGAGAGGGAGGTAGAGCTACACCACCATCGTCATTTTAGAGATACAAAGGCAAAGTTGCACCATCGTTGTCATCTTGGGGAGAGTAGAGGTGGAGTTTCATCATCATCGTCATCTTAGATAGGTGAAGGTAGAGCTGCTTCATCGTCATCATCTTTGGAGAATGGAAATGAAGCTGCACCGTCATTGTCATCTTGGAGAGGCAGAGGTAGAGCTGCACCATAGTCATCCTCTTAAAGTTGCACCATTATCATTTGGAGAGTTGGAGGCCAAGATGTACTATCATCATCATGCTTGGAGCTGTAACACATTGGAGATGAATGATCCCCTCGATGGTCGATATTGGAGATGA

mRNA sequence

CATAAGTGGAGCTGCACCATCGTTATCATCTTAAAGACACATCATCGTCATCTTAGATAGGTGAAGGTAGAGCTGCTTCATCGTCATCATCTTTGGAGAATGGAAATGAAGCTGCACCGTCATTGTCATCTTGGAGAGGCAGAGGTAGAGCTGCACCATAGTCATCCTCTTAAAGTTGCACCATTATCATTTGGAGAGTTGGAGGCCAAGATGTACTATCATCATCATGCTTGGAGCTGTAACACATTGGAGATGAATGATCCCCTCGATGGTCGATATTGGAGATGA

Coding sequence (CDS)

ATGGAAATGAAGCTGCACCGTCATTGTCATCTTGGAGAGGCAGAGGTAGAGCTGCACCATAGTCATCCTCTTAAAGTTGCACCATTATCATTTGGAGAGTTGGAGGCCAAGATGTACTATCATCATCATGCTTGGAGCTGTAACACATTGGAGATGAATGATCCCCTCGATGGTCGATATTGGAGATGA

Protein sequence

MEMKLHRHCHLGEAEVELHHSHPLKVAPLSFGELEAKMYYHHHAWSCNTLEMNDPLDGRYWR
Homology
BLAST of MELO3C032403 vs. NCBI nr
Match: TYK05019.1 (histidine-rich glycoprotein-like [Cucumis melo var. makuwa])

HSP 1 Score: 99.0 bits (245), Expect = 1.5e-17
Identity = 43/58 (74.14%), Postives = 50/58 (86.21%), Query Frame = 0

Query: 1   MEMKLHRHCHLGEAEVELHHSHPLKVAPLSFGELEAKMYYHHHAWSCNTLEMNDPLDG 59
           +E +LH H HLG+AEV+LHH HPL+VAP SFGEL+  MYYHHHA SCNTLEMN+PLDG
Sbjct: 222 VEEELHHHHHLGDAEVKLHHRHPLEVAPSSFGELKVDMYYHHHARSCNTLEMNNPLDG 279

BLAST of MELO3C032403 vs. NCBI nr
Match: KAA0066173.1 (hypothetical protein E6C27_scaffold21G001800 [Cucumis melo var. makuwa] >TYK15213.1 hypothetical protein E5676_scaffold790G00900 [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12
Identity = 39/60 (65.00%), Postives = 43/60 (71.67%), Query Frame = 0

Query: 2   EMKLHRHCHLGEAEVELHHSHPLKVAPLSFGELEAKMYYHHHAWSCNTLEMNDPLDGRYW 61
           E KL+ H  LGE EVEL+H H        FGELEA+MYYHHHAWSCN LEMNDPLD + W
Sbjct: 125 EAKLYDHHLLGEVEVELYHHH-------HFGELEAEMYYHHHAWSCNILEMNDPLDSQSW 177

BLAST of MELO3C032403 vs. NCBI nr
Match: KAA0042150.1 (hypothetical protein E6C27_scaffold67G006410 [Cucumis melo var. makuwa] >TYK26725.1 hypothetical protein E5676_scaffold124G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 80.9 bits (198), Expect = 4.3e-12
Identity = 40/62 (64.52%), Postives = 43/62 (69.35%), Query Frame = 0

Query: 1   MEMKLHRHCHLGEAEVELHHSHPLKVAPLSFGELEAKMYYHHHAWSCNTLEMNDPLDGRY 60
           +E KLH H  L E E ELHHSH        FGELEA+MYYHHHA S N LEMNDP +GRY
Sbjct: 238 VEAKLHDHHLLREVEAELHHSH-------YFGELEAEMYYHHHARSYNILEMNDPFNGRY 292

Query: 61  WR 63
           WR
Sbjct: 298 WR 292

BLAST of MELO3C032403 vs. NCBI nr
Match: TYJ99973.1 (histidine-rich glycoprotein-like [Cucumis melo var. makuwa])

HSP 1 Score: 71.6 bits (174), Expect = 2.6e-09
Identity = 32/44 (72.73%), Postives = 35/44 (79.55%), Query Frame = 0

Query: 1   MEMKLHRHCHLGEAEVELHHSHPLKVAPLSFGELEAKMYYHHHA 45
           +EMKLH  CHL E EVELH  HPL+VAP SF ELE +MYYHHHA
Sbjct: 132 VEMKLHHCCHLKEVEVELHRRHPLRVAPSSFRELEVEMYYHHHA 175

BLAST of MELO3C032403 vs. ExPASy TrEMBL
Match: A0A5D3C3Q9 (Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G002720 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 7.5e-18
Identity = 43/58 (74.14%), Postives = 50/58 (86.21%), Query Frame = 0

Query: 1   MEMKLHRHCHLGEAEVELHHSHPLKVAPLSFGELEAKMYYHHHAWSCNTLEMNDPLDG 59
           +E +LH H HLG+AEV+LHH HPL+VAP SFGEL+  MYYHHHA SCNTLEMN+PLDG
Sbjct: 222 VEEELHHHHHLGDAEVKLHHRHPLEVAPSSFGELKVDMYYHHHARSCNTLEMNNPLDG 279

BLAST of MELO3C032403 vs. ExPASy TrEMBL
Match: A0A5D3CTI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00900 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.5e-13
Identity = 39/60 (65.00%), Postives = 43/60 (71.67%), Query Frame = 0

Query: 2   EMKLHRHCHLGEAEVELHHSHPLKVAPLSFGELEAKMYYHHHAWSCNTLEMNDPLDGRYW 61
           E KL+ H  LGE EVEL+H H        FGELEA+MYYHHHAWSCN LEMNDPLD + W
Sbjct: 125 EAKLYDHHLLGEVEVELYHHH-------HFGELEAEMYYHHHAWSCNILEMNDPLDSQSW 177

BLAST of MELO3C032403 vs. ExPASy TrEMBL
Match: A0A5D3DTT9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00090 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.1e-12
Identity = 40/62 (64.52%), Postives = 43/62 (69.35%), Query Frame = 0

Query: 1   MEMKLHRHCHLGEAEVELHHSHPLKVAPLSFGELEAKMYYHHHAWSCNTLEMNDPLDGRY 60
           +E KLH H  L E E ELHHSH        FGELEA+MYYHHHA S N LEMNDP +GRY
Sbjct: 238 VEAKLHDHHLLREVEAELHHSH-------YFGELEAEMYYHHHARSYNILEMNDPFNGRY 292

Query: 61  WR 63
           WR
Sbjct: 298 WR 292

BLAST of MELO3C032403 vs. ExPASy TrEMBL
Match: A0A5D3BL12 (Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00140 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-09
Identity = 32/44 (72.73%), Postives = 35/44 (79.55%), Query Frame = 0

Query: 1   MEMKLHRHCHLGEAEVELHHSHPLKVAPLSFGELEAKMYYHHHA 45
           +EMKLH  CHL E EVELH  HPL+VAP SF ELE +MYYHHHA
Sbjct: 132 VEMKLHHCCHLKEVEVELHRRHPLRVAPSSFRELEVEMYYHHHA 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK05019.11.5e-1774.14histidine-rich glycoprotein-like [Cucumis melo var. makuwa][more]
KAA0066173.11.1e-1265.00hypothetical protein E6C27_scaffold21G001800 [Cucumis melo var. makuwa] >TYK1521... [more]
KAA0042150.14.3e-1264.52hypothetical protein E6C27_scaffold67G006410 [Cucumis melo var. makuwa] >TYK2672... [more]
TYJ99973.12.6e-0972.73histidine-rich glycoprotein-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C3Q97.5e-1874.14Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5D3CTI95.5e-1365.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DTT92.1e-1264.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BL121.3e-0972.73Histidine-rich glycoprotein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C032403.1MELO3C032403.1mRNA