Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTTGTTGGCTATCATGCAGTTATGGTAGCCTCCGTAGTTTGAAGGGGTGGGTAGGATGCGAAGATTTTTGAAGTATTTTGAAGTTAGTTTTAGTGAAAATTTAGAGGAGTAAGTTATAAATGTGTGTGAGAGAAAGATATGTATCTCTTTCTAATCAAACCTATTTATGTTTTAGGGACTTAAACGATGGACAAGAGTTGGATGAAACTTAGAAATAAGTTCTCCCTTAAGTATAGACAGGGAGTGACCCAATTTTTAGAATTTGTCAAGTTTCACGTTGATGCCTATGGACGATTAAGGTGTCCATGCAAGAGATGTTTAAATTTAAGTTGAAGCTCATTAGAGGGTGTGGACGACATCTACTGACTATTGGAATATACCCTCTTACACAGAATGGGTGTATCATAGAGAGCCATTAAGCTTTAGAGGTACAGAAAATTTTGAAGAATGAACTAGTAGTAATCCTTTTGATGAAGGAACTAGTAGTAGGCAATTTAATGAAGAAGATGAAATGTTTGGTATGCTAAATGACTTACATGCCCCCATTGAACATGAAGAGGAAACAGAGTTATGTTGTTTGGAAAAATGAAATGCCGATGAATGTTGGGGTAAATATAGATGAAGATAGAACAAACAATATATTTCAGGACTTATTGAATGAAGCACGTAATGAGTTGTACCCAGGTTGTTCTGAATTTTCGTCGTTAAATTTTTTGGTTAAGTTGA
mRNA sequence
GTTTTGTTGGCTATCATGCAGTTATGGGACTTAAACGATGGACAAGAGTTGGATGAAACTTAGAAATAAGTTCTCCCTTAAGTATAGACAGGGAGTGACCCAATTTTTAGAATTTGTCAAGTTTCACGTTGATGCCTATGGACGATTAAGGTGTCCATGCAAGAGATGTTTAAATTTAAGTTGAAGCTCATTAGAGGGTGTGGACGACATCTACTGACTATTGGAATATACCCTCTTACACAGAATGGGTGTATCATAGAGAGCCATTAAGCTTTAGAGGTACAGAAAATTTTGAAGAATGAACTAGTAGTAATCCTTTTGATGAAGGAACTAGTAGTAGGCAATTTAATGAAGAAGATGAAATGTTTGGTATGCTAAATGACTTACATGCCCCCATTGAACATGAAGAGGAAACAGAGTTATGTTGTTTGGAAAAATGAAATGCCGATGAATGTTGGGGTAAATATAGATGAAGATAGAACAAACAATATATTTCAGGACTTATTGAATGAAGCACGTAATGAGTTGTACCCAGGTTGTTCTGAATTTTCGTCGTTAAATTTTTTGGTTAAGTTGA
Coding sequence (CDS)
ATGACTTACATGCCCCCATTGAACATGAAGAGGAAACAGAGTTATGTTGTTTGGAAAAATGAAATGCCGATGAATGTTGGGGTAAATATAGATGAAGATAGAACAAACAATATATTTCAGGACTTATTGAATGAAGCACGTAATGAGTTGTACCCAGGTTGTTCTGAATTTTCGTCGTTAAATTTTTTGGTTAAGTTG
Protein sequence
MTYMPPLNMKRKQSYVVWKNEMPMNVGVNIDEDRTNNIFQDLLNEARNELYPGCSEFSSLNFLVKL
Homology
BLAST of MELO3C031798 vs. NCBI nr
Match:
KAA0035646.1 (uncharacterized protein E6C27_scaffold285G003370 [Cucumis melo var. makuwa])
HSP 1 Score: 98.6 bits (244), Expect = 2.1e-17
Identity = 48/61 (78.69%), Postives = 51/61 (83.61%), Query Frame = 0
Query: 6 PLNMKRKQSYVVWKNEMPMNVGVNIDEDRTNNIFQDLLNEARNELYPGCSEFSSLNFLVK 65
P+ K K K+EMPMNVGV+IDEDRTNNIFQDLLNEARNE YPGCSEFSSLNFLVK
Sbjct: 5 PIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLNFLVK 64
Query: 66 L 67
L
Sbjct: 65 L 65
BLAST of MELO3C031798 vs. NCBI nr
Match:
KAA0064176.1 (CACTA transposable element [Cucumis melo var. makuwa] >TYK02853.1 CACTA transposable element [Cucumis melo var. makuwa])
HSP 1 Score: 92.4 bits (228), Expect = 1.5e-15
Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 0
Query: 6 PLNMKRKQSYVVWKNEMPMNVGVNIDEDRTNNIFQDLLNEARNELYPGCSEFSSLNFLVK 65
P+ + + + ++EMPMNVGV+IDEDRTNNIF DLLNE RNELYPGCSEFSSLNFLVK
Sbjct: 8 PIEHEEETEELRLEDEMPMNVGVDIDEDRTNNIFYDLLNEERNELYPGCSEFSSLNFLVK 67
Query: 66 L 67
L
Sbjct: 68 L 68
BLAST of MELO3C031798 vs. NCBI nr
Match:
TYK18968.1 (uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa])
HSP 1 Score: 91.3 bits (225), Expect = 3.4e-15
Identity = 43/48 (89.58%), Postives = 46/48 (95.83%), Query Frame = 0
Query: 19 KNEMPMNVGVNIDEDRTNNIFQDLLNEARNELYPGCSEFSSLNFLVKL 67
++EM MNVGVNIDED TNNIFQDLLN+ARNELYPGCSEFSSLNFLVKL
Sbjct: 207 EDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLVKL 254
BLAST of MELO3C031798 vs. NCBI nr
Match:
KAA0032061.1 (uncharacterized protein E6C27_scaffold223G00250 [Cucumis melo var. makuwa])
HSP 1 Score: 91.3 bits (225), Expect = 3.4e-15
Identity = 43/48 (89.58%), Postives = 46/48 (95.83%), Query Frame = 0
Query: 19 KNEMPMNVGVNIDEDRTNNIFQDLLNEARNELYPGCSEFSSLNFLVKL 67
++EM MNVGVNIDED TNNIFQDLLN+ARNELYPGCSEFSSLNFLVKL
Sbjct: 21 EDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLVKL 68
BLAST of MELO3C031798 vs. NCBI nr
Match:
KAA0056368.1 (uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa])
HSP 1 Score: 91.3 bits (225), Expect = 3.4e-15
Identity = 43/48 (89.58%), Postives = 46/48 (95.83%), Query Frame = 0
Query: 19 KNEMPMNVGVNIDEDRTNNIFQDLLNEARNELYPGCSEFSSLNFLVKL 67
++EM MNVGVNIDED TNNIFQDLLN+ARNELYPGCSEFSSLNFLVKL
Sbjct: 133 EDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLVKL 180
BLAST of MELO3C031798 vs. ExPASy TrEMBL
Match:
A0A5A7T0C5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G003370 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 1.0e-17
Identity = 48/61 (78.69%), Postives = 51/61 (83.61%), Query Frame = 0
Query: 6 PLNMKRKQSYVVWKNEMPMNVGVNIDEDRTNNIFQDLLNEARNELYPGCSEFSSLNFLVK 65
P+ K K K+EMPMNVGV+IDEDRTNNIFQDLLNEARNE YPGCSEFSSLNFLVK
Sbjct: 5 PIEQKEKLEEHRLKDEMPMNVGVDIDEDRTNNIFQDLLNEARNEFYPGCSEFSSLNFLVK 64
Query: 66 L 67
L
Sbjct: 65 L 65
BLAST of MELO3C031798 vs. ExPASy TrEMBL
Match:
A0A5D3BT53 (CACTA transposable element OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00550 PE=4 SV=1)
HSP 1 Score: 92.4 bits (228), Expect = 7.4e-16
Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 0
Query: 6 PLNMKRKQSYVVWKNEMPMNVGVNIDEDRTNNIFQDLLNEARNELYPGCSEFSSLNFLVK 65
P+ + + + ++EMPMNVGV+IDEDRTNNIF DLLNE RNELYPGCSEFSSLNFLVK
Sbjct: 8 PIEHEEETEELRLEDEMPMNVGVDIDEDRTNNIFYDLLNEERNELYPGCSEFSSLNFLVK 67
Query: 66 L 67
L
Sbjct: 68 L 68
BLAST of MELO3C031798 vs. ExPASy TrEMBL
Match:
A0A5D3D5X7 (Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold418G00580 PE=4 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 1.7e-15
Identity = 43/48 (89.58%), Postives = 46/48 (95.83%), Query Frame = 0
Query: 19 KNEMPMNVGVNIDEDRTNNIFQDLLNEARNELYPGCSEFSSLNFLVKL 67
++EM MNVGVNIDED TNNIFQDLLN+ARNELYPGCSEFSSLNFLVKL
Sbjct: 207 EDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLVKL 254
BLAST of MELO3C031798 vs. ExPASy TrEMBL
Match:
A0A5A7UMP4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold186G001050 PE=4 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 1.7e-15
Identity = 43/48 (89.58%), Postives = 46/48 (95.83%), Query Frame = 0
Query: 19 KNEMPMNVGVNIDEDRTNNIFQDLLNEARNELYPGCSEFSSLNFLVKL 67
++EM MNVGVNIDED TNNIFQDLLN+ARNELYPGCSEFSSLNFLVKL
Sbjct: 133 EDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLVKL 180
BLAST of MELO3C031798 vs. ExPASy TrEMBL
Match:
A0A5A7SR78 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold223G00250 PE=4 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 1.7e-15
Identity = 43/48 (89.58%), Postives = 46/48 (95.83%), Query Frame = 0
Query: 19 KNEMPMNVGVNIDEDRTNNIFQDLLNEARNELYPGCSEFSSLNFLVKL 67
++EM MNVGVNIDED TNNIFQDLLN+ARNELYPGCSEFSSLNFLVKL
Sbjct: 21 EDEMAMNVGVNIDEDTTNNIFQDLLNQARNELYPGCSEFSSLNFLVKL 68
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAA0035646.1 | 2.1e-17 | 78.69 | uncharacterized protein E6C27_scaffold285G003370 [Cucumis melo var. makuwa] | [more] |
| KAA0064176.1 | 1.5e-15 | 72.13 | CACTA transposable element [Cucumis melo var. makuwa] >TYK02853.1 CACTA transpos... | [more] |
| TYK18968.1 | 3.4e-15 | 89.58 | uncharacterized protein E5676_scaffold418G00580 [Cucumis melo var. makuwa] | [more] |
| KAA0032061.1 | 3.4e-15 | 89.58 | uncharacterized protein E6C27_scaffold223G00250 [Cucumis melo var. makuwa] | [more] |
| KAA0056368.1 | 3.4e-15 | 89.58 | uncharacterized protein E6C27_scaffold186G001050 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7T0C5 | 1.0e-17 | 78.69 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5D3BT53 | 7.4e-16 | 72.13 | CACTA transposable element OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
| A0A5D3D5X7 | 1.7e-15 | 89.58 | Transpos_assoc domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| A0A5A7UMP4 | 1.7e-15 | 89.58 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5A7SR78 | 1.7e-15 | 89.58 | DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
