Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGTCGGAGGAACAAAATCAGTTGGAGACGGCGACGTCAATATCTCTGGACCAAAAGGTCTAGGTGGACCAGGAGGTCTAGGTGGCATCTCCTCCGGTGGCGACGGCGGTAAAATTTCTGGTCCTGGTACTGGCGAACCAGGCCATGGTGGCTCTATATCTGGAGGCTTACGGGGTGGTACCGGTACATCGATTCCCGGAGGAGACGGCGACGGAGGCTTCGGAAACTCTGGTCCTGGCGGCCGGGGATCAGGAAAATCCGGCTCCGGAGTTATCGACGGAAGCTCCGACGGAGTGCTTGGGTCAATCTCCGGAGGAGGCGAAAATTGTGGAATTTCGAGGGGTAAAGAAGGCGGTGGAACCGGGCGGCTTTTGGGAAACTCCGGCGAGTCACCCGAAAGCATAGAGCGCGAGAGAGACGTGGAGTATTCATTGAAGGAGAGGAATTGGGAATGA
mRNA sequence
ATGTACGTCGGAGGAACAAAATCAGTTGGAGACGGCGACGTCAATATCTCTGGACCAAAAGGTCTAGGTGGACCAGGAGGTCTAGGTGGCATCTCCTCCGGTGGCGACGGCGGTAAAATTTCTGGTCCTGGTACTGGCGAACCAGGCCATGGTGGCTCTATATCTGGAGGCTTACGGGGTGGTACCGGTACATCGATTCCCGGAGGAGACGGCGACGGAGGCTTCGGAAACTCTGGTCCTGGCGGCCGGGGATCAGGAAAATCCGGCTCCGGAGTTATCGACGGAAGCTCCGACGGAGTGCTTGGGTCAATCTCCGGAGGAGGCGAAAATTGTGGAATTTCGAGGGGTAAAGAAGGCGGTGGAACCGGGCGGCTTTTGGGAAACTCCGGCGAGTCACCCGAAAGCATAGAGCGCGAGAGAGACGTGGAGTATTCATTGAAGGAGAGGAATTGGGAATGA
Coding sequence (CDS)
ATGTACGTCGGAGGAACAAAATCAGTTGGAGACGGCGACGTCAATATCTCTGGACCAAAAGGTCTAGGTGGACCAGGAGGTCTAGGTGGCATCTCCTCCGGTGGCGACGGCGGTAAAATTTCTGGTCCTGGTACTGGCGAACCAGGCCATGGTGGCTCTATATCTGGAGGCTTACGGGGTGGTACCGGTACATCGATTCCCGGAGGAGACGGCGACGGAGGCTTCGGAAACTCTGGTCCTGGCGGCCGGGGATCAGGAAAATCCGGCTCCGGAGTTATCGACGGAAGCTCCGACGGAGTGCTTGGGTCAATCTCCGGAGGAGGCGAAAATTGTGGAATTTCGAGGGGTAAAGAAGGCGGTGGAACCGGGCGGCTTTTGGGAAACTCCGGCGAGTCACCCGAAAGCATAGAGCGCGAGAGAGACGTGGAGTATTCATTGAAGGAGAGGAATTGGGAATGA
Protein sequence
MYVGGTKSVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRGGTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGGGTGRLLGNSGESPESIERERDVEYSLKERNWE
Homology
BLAST of MELO3C031674.jh1 vs. NCBI nr
Match:
KAA0049320.1 (glycine-rich cell wall structural protein 1.0-like [Cucumis melo var. makuwa])
HSP 1 Score: 272 bits (696), Expect = 1.43e-91
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MYVGGTKSVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG 60
MYVGGTKSVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG
Sbjct: 1 MYVGGTKSVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG 60
Query: 61 GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG 120
GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG
Sbjct: 61 GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG 120
Query: 121 GTGRLLGNSGESPESIERERDVEYSLKERNWE 152
GTGRLLGNSGESPESIERERDVEYSLKERNWE
Sbjct: 121 GTGRLLGNSGESPESIERERDVEYSLKERNWE 152
BLAST of MELO3C031674.jh1 vs. NCBI nr
Match:
XP_016898954.1 (PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo])
HSP 1 Score: 268 bits (684), Expect = 9.67e-90
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0
Query: 1 MYVGGTKSVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG 60
MYVGGT+SVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG
Sbjct: 1 MYVGGTRSVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG 60
Query: 61 GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG 120
GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG
Sbjct: 61 GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG 120
Query: 121 GTGRLLGNSGESPESIERERDVEYSLKERNWE 152
GTGRLLGNSGES ESIERERDVEYSLKERNWE
Sbjct: 121 GTGRLLGNSGESHESIERERDVEYSLKERNWE 152
BLAST of MELO3C031674.jh1 vs. NCBI nr
Match:
XP_011652754.1 (glycine-rich cell wall structural protein-like [Cucumis sativus])
HSP 1 Score: 222 bits (566), Expect = 8.98e-72
Identity = 132/152 (86.84%), Postives = 135/152 (88.82%), Query Frame = 0
Query: 1 MYVGGTKSVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG 60
MYV TK GD DVNISGPKGLGG GGLGG SSGGDGGKISG GTGEPGHGGSISGGLRG
Sbjct: 1 MYVRATKPGGDADVNISGPKGLGGLGGLGGTSSGGDGGKISGSGTGEPGHGGSISGGLRG 60
Query: 61 GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG 120
G+GTSIPGGDG+GGFGNSGPGG G G SGSGVIDGSSDGVLGSISGGGENCGISRGKEGG
Sbjct: 61 GSGTSIPGGDGNGGFGNSGPGGLG-GNSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG 120
Query: 121 GTGRLLGNSGESPESIERERDVEYSLKERNWE 152
GTGR+ GNSGESPES E ERD YSLK RNWE
Sbjct: 121 GTGRISGNSGESPESRESERDAGYSLKGRNWE 151
BLAST of MELO3C031674.jh1 vs. ExPASy TrEMBL
Match:
A0A5A7U1W0 (Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G005620 PE=4 SV=1)
HSP 1 Score: 272 bits (696), Expect = 6.93e-92
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
Query: 1 MYVGGTKSVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG 60
MYVGGTKSVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG
Sbjct: 1 MYVGGTKSVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG 60
Query: 61 GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG 120
GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG
Sbjct: 61 GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG 120
Query: 121 GTGRLLGNSGESPESIERERDVEYSLKERNWE 152
GTGRLLGNSGESPESIERERDVEYSLKERNWE
Sbjct: 121 GTGRLLGNSGESPESIERERDVEYSLKERNWE 152
BLAST of MELO3C031674.jh1 vs. ExPASy TrEMBL
Match:
A0A1S4DSJ3 (glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LOC107990388 PE=4 SV=1)
HSP 1 Score: 268 bits (684), Expect = 4.68e-90
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0
Query: 1 MYVGGTKSVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG 60
MYVGGT+SVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG
Sbjct: 1 MYVGGTRSVGDGDVNISGPKGLGGPGGLGGISSGGDGGKISGPGTGEPGHGGSISGGLRG 60
Query: 61 GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG 120
GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG
Sbjct: 61 GTGTSIPGGDGDGGFGNSGPGGRGSGKSGSGVIDGSSDGVLGSISGGGENCGISRGKEGG 120
Query: 121 GTGRLLGNSGESPESIERERDVEYSLKERNWE 152
GTGRLLGNSGES ESIERERDVEYSLKERNWE
Sbjct: 121 GTGRLLGNSGESHESIERERDVEYSLKERNWE 152
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0049320.1 | 1.43e-91 | 100.00 | glycine-rich cell wall structural protein 1.0-like [Cucumis melo var. makuwa] | [more] |
XP_016898954.1 | 9.67e-90 | 98.68 | PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo] | [more] |
XP_011652754.1 | 8.98e-72 | 86.84 | glycine-rich cell wall structural protein-like [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U1W0 | 6.93e-92 | 100.00 | Glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo var. makuwa O... | [more] |
A0A1S4DSJ3 | 4.68e-90 | 98.68 | glycine-rich cell wall structural protein 1.0-like OS=Cucumis melo OX=3656 GN=LO... | [more] |
Match Name | E-value | Identity | Description | |