MELO3C031638.jh1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO3C031638.jh1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	LOB domain-containing protein
Location	chr06: 7234556 .. 7235400 (+)
RNA-Seq Expression	MELO3C031638.jh1
Synteny	MELO3C031638.jh1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCCGTTATCTATTGTCAATAAAAAACACACACTCTCCATATTTCACCATAAAATGTATATATACACAAAAGATTTGGAGAATCTTCATCCAAATCTTCTTCTCTCTTATTTTCTTCCAAAATCTAGATCTTGTCAAATATATTATATTCAGTTTGGATTTTTAGTATGATTTCTGGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGCCCTTCCGATTGTATCTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCTAGTAATGTTGCTAAATTCCTCCATGTAAGTTTATGATATATTTCATTTTCCACCTACCATTTTAACTTATCGTATCATATCATATCATATCTCTTATTTCCATTCTTTCTCACCACCTTACTTAATTATCTATATATATTTCTTAGTCACTCTTTTTTTTCTTTTTTTTTTTTGATAATTTAATCAGCAACTTCCTACACATTTAAGAGGTGAAGCAGCAGAAACTTTAATATTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTAGGGATTATTTCCCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTGAGATTGCTTGTGTGGCTTCCAATGTCCAAGAAGAACAGCCTCAACTCCAAGATTTTGCATTTCAGCCCATTCAAGGCCCAAATTCTGTTGGGTTCTCTCAAATTGGCCTTTCCAGTCCGGCCCATTGTTTTAATTCCAGCTTTTTCTAATTCATAACACGTTCTAAACATGGCTTCTACAGAAAGAAAAGTCCCTTTTCCTTTCA

mRNA sequence

TAGCCGTTATCTATTGTCAATAAAAAACACACACTCTCCATATTTCACCATAAAATGTATATATACACAAAAGATTTGGAGAATCTTCATCCAAATCTTCTTCTCTCTTATTTTCTTCCAAAATCTAGATCTTGTCAAATATATTATATTCAGTTTGGATTTTTAGTATGATTTCTGGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGCCCTTCCGATTGTATCTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCTAGTAATGTTGCTAAATTCCTCCATCAACTTCCTACACATTTAAGAGGTGAAGCAGCAGAAACTTTAATATTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTAGGGATTATTTCCCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTGAGATTGCTTGTGTGGCTTCCAATGTCCAAGAAGAACAGCCTCAACTCCAAGATTTTGCATTTCAGCCCATTCAAGGCCCAAATTCTGTTGGGTTCTCTCAAATTGGCCTTTCCAGTCCGGCCCATTGTTTTAATTCCAGCTTTTTCTAATTCATAACACGTTCTAAACATGGCTTCTACAGAAAGAAAAGTCCCTTTTCCTTTCA

Coding sequence (CDS)

ATGATTTCTGGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGCCCTTCCGATTGTATCTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCTAGTAATGTTGCTAAATTCCTCCATCAACTTCCTACACATTTAAGAGGTGAAGCAGCAGAAACTTTAATATTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTAGGGATTATTTCCCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTGAGATTGCTTGTGTGGCTTCCAATGTCCAAGAAGAACAGCCTCAACTCCAAGATTTTGCATTTCAGCCCATTCAAGGCCCAAATTCTGTTGGGTTCTCTCAAATTGGCCTTTCCAGTCCGGCCCATTGTTTTAATTCCAGCTTTTTCTAA

Protein sequence

MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFF

Homology

[Close]

BLAST of MELO3C031638.jh1 vs. NCBI nr
Match: XP_008439169.1 (PREDICTED: LOB domain-containing protein 24-like [Cucumis melo])

HSP 1 Score: 315 bits (806), Expect = 2.40e-108
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120
           AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFF 152
           DFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFF
Sbjct: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFF 152

[Close]

BLAST of MELO3C031638.jh1 vs. NCBI nr
Match: XP_004140854.1 (LOB domain-containing protein 24 [Cucumis sativus] >KGN57342.1 hypothetical protein Csa_009713 [Cucumis sativus])

HSP 1 Score: 298 bits (764), Expect = 6.55e-102
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120
           AAETLIFEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAKTRAEIACVASNVQE QPQ Q
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQE-QPQPQ 120

Query: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFF 152
           DFAF+PIQGPNSVGFSQIGLS+PAHCFNS+FF
Sbjct: 121 DFAFEPIQGPNSVGFSQIGLSTPAHCFNSTFF 151

[Close]

BLAST of MELO3C031638.jh1 vs. NCBI nr
Match: XP_023522202.1 (LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274 bits (700), Expect = 2.97e-92
Identity = 134/149 (89.93%), Postives = 139/149 (93.29%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120
           AAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA +ASN+QE QPQ  
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPQ-- 120

Query: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNS 149
           DFA QPIQGPN++GFSQIGLS+PAH FNS
Sbjct: 121 DFAVQPIQGPNTIGFSQIGLSTPAHWFNS 147

[Close]

BLAST of MELO3C031638.jh1 vs. NCBI nr
Match: KAG7014789.1 (LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 270 bits (689), Expect = 1.41e-90
Identity = 132/149 (88.59%), Postives = 138/149 (92.62%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRPE 60

Query: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120
           AAE+L FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA +ASN+QE Q  L 
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQ--LH 120

Query: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNS 149
           DFA QPIQGPN++GFSQIGLS+PAH FNS
Sbjct: 121 DFAVQPIQGPNTIGFSQIGLSTPAHWFNS 147

[Close]

BLAST of MELO3C031638.jh1 vs. NCBI nr
Match: XP_022985104.1 (LOB domain-containing protein 24-like [Cucurbita maxima])

HSP 1 Score: 269 bits (688), Expect = 2.07e-90
Identity = 133/150 (88.67%), Postives = 139/150 (92.67%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNV-QEEQPQL 120
           AAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA +ASN+ QE QPQ 
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEAQPQ- 120

Query: 121 QDFAFQPIQGPNSVGFSQIGLSSPAHCFNS 149
            DFA +PIQGPN++GFSQIGLS+PAH FNS
Sbjct: 121 -DFAVEPIQGPNTIGFSQIGLSTPAHWFNS 148

[Close]

BLAST of MELO3C031638.jh1 vs. ExPASy Swiss-Prot
Match: P59467 (LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37
Identity = 72/118 (61.02%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   R EA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQDF 123
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + +   Q  + DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKL--SQTHISDF 120

[Close]

BLAST of MELO3C031638.jh1 vs. ExPASy Swiss-Prot
Match: P59468 (LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37
Identity = 70/112 (62.50%), Postives = 86/112 (76.79%), Query Frame = 0


Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   R EA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQ 117
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + + + Q
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQ 116

[Close]

BLAST of MELO3C031638.jh1 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 4.3e-32
Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 0


Query: 3   SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAA 62
           S  CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H R +A 
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 63  ETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 121
            +L+FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +AEI C+     + +P LQ
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQ---MQNEPTLQ 120

[Close]

BLAST of MELO3C031638.jh1 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-31
Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 6   CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETL 65
           CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H RG+A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 66  IFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI 106
           ++EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEV 113

[Close]

BLAST of MELO3C031638.jh1 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 8.4e-28
Identity = 52/104 (50.00%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 3   SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAA 62
           S  CAACK+LRR+C  +C+F+P+FP + PQ+F  VH+++GASNVAK L++L ++ R +A 
Sbjct: 5   SSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAV 64

Query: 63  ETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA 107
            +L +EA+ R+ DPVYGCVG+IS LQH+L      L   + E+A
Sbjct: 65  NSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

[Close]

BLAST of MELO3C031638.jh1 vs. ExPASy TrEMBL
Match: A0A1S3AY36 (LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE=3 SV=1)

HSP 1 Score: 315 bits (806), Expect = 1.16e-108
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60

Query: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120
           AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120

Query: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFF 152
           DFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFF
Sbjct: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFF 152

[Close]

BLAST of MELO3C031638.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L9N7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV=1)

HSP 1 Score: 298 bits (764), Expect = 3.17e-102
Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRAE 60

Query: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120
           AAETLIFEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAKTRAEIACVASNVQE QPQ Q
Sbjct: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHELHVAETQLAKTRAEIACVASNVQE-QPQPQ 120

Query: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFF 152
           DFAF+PIQGPNSVGFSQIGLS+PAHCFNS+FF
Sbjct: 121 DFAFEPIQGPNSVGFSQIGLSTPAHCFNSTFF 151

[Close]

BLAST of MELO3C031638.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JCD0 (LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC111483182 PE=3 SV=1)

HSP 1 Score: 269 bits (688), Expect = 1.00e-90
Identity = 133/150 (88.67%), Postives = 139/150 (92.67%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60
           MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPVHLRAE 60

Query: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNV-QEEQPQL 120
           AAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA +ASN+ QE QPQ 
Sbjct: 61  AAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLHQEAQPQ- 120

Query: 121 QDFAFQPIQGPNSVGFSQIGLSSPAHCFNS 149
            DFA +PIQGPN++GFSQIGLS+PAH FNS
Sbjct: 121 -DFAVEPIQGPNTIGFSQIGLSTPAHWFNS 148

[Close]

BLAST of MELO3C031638.jh1 vs. ExPASy TrEMBL
Match: A0A6J1E5I6 (LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430896 PE=3 SV=1)

HSP 1 Score: 267 bits (682), Expect = 7.97e-90
Identity = 131/149 (87.92%), Postives = 137/149 (91.95%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60
           MISGRCAACKYLRRRC SDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR E
Sbjct: 1   MISGRCAACKYLRRRCASDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPLHLRPE 60

Query: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120
           AAE+L FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA +ASN+QE QP   
Sbjct: 61  AAESLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIAFLASNLQEAQPH-- 120

Query: 121 DFAFQPIQGPNSVGFSQIGLSSPAHCFNS 149
           DFA QPIQGPN++GFSQIGLS+PAH FNS
Sbjct: 121 DFAAQPIQGPNTIGFSQIGLSTPAHWFNS 147

[Close]

BLAST of MELO3C031638.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LLX6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV=1)

HSP 1 Score: 212 bits (540), Expect = 3.48e-68
Identity = 109/146 (74.66%), Postives = 119/146 (81.51%), Query Frame = 0


Query: 1   MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGE 60
           MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRF IVHRIYGASNVAKFL Q+P  LRGE
Sbjct: 1   MIPSRCAACKYLRRRCSSNCIFSPYFPSNNPQRFAIVHRIYGASNVAKFLQQVPMDLRGE 60

Query: 61  AAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 120
           AAETL FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAKTRAEIA +ASN   +Q Q +
Sbjct: 61  AAETLYFEAKCRIEDPIYGCVGIISQLQYELHVAETQLAKTRAEIALLASN--RQQAQHE 120

Query: 121 DFAFQ-PIQGPNSVGFSQIGLSSPAH 145
           DF F  P  GP   G     LS+PAH
Sbjct: 121 DFPFDDPSSGPIFTG-----LSTPAH 139

[Close]

BLAST of MELO3C031638.jh1 vs. TAIR 10
Match: AT3G26620.1 (LOB domain-containing protein 23 )

HSP 1 Score: 157.5 bits (397), Expect = 8.3e-39
Identity = 72/118 (61.02%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   R EA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQDF 123
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + +   Q  + DF
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKL--SQTHISDF 120

[Close]

BLAST of MELO3C031638.jh1 vs. TAIR 10
Match: AT3G26660.1 (LOB domain-containing protein 24 )

HSP 1 Score: 157.5 bits (397), Expect = 8.3e-39
Identity = 70/112 (62.50%), Postives = 86/112 (76.79%), Query Frame = 0


Query: 5   RCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAET 64
           RCAACKYLRRRCP DC+FSP+FP N+PQ+F  VHRIYGA NV+K L QLP   R EA E+
Sbjct: 5   RCAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVES 64

Query: 65  LIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQ 117
           L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+AEIA   + + + Q
Sbjct: 65  LCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEIAVAQTKLSQTQ 116

[Close]

BLAST of MELO3C031638.jh1 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-33
Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 0


Query: 3   SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAA 62
           S  CA+CK LRRRC  DCIF+P+FP ++P +F IVH+++GASNV+K L +LP H R +A 
Sbjct: 6   SSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAV 65

Query: 63  ETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQ 121
            +L+FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +AEI C+     + +P LQ
Sbjct: 66  NSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQ---MQNEPTLQ 120

[Close]

BLAST of MELO3C031638.jh1 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32
Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0


Query: 6   CAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETL 65
           CAACK LRRRC  DC+FSP+FP++ PQ+F  VHR++GASNV K L +LP H RG+A  ++
Sbjct: 14  CAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVSSM 73

Query: 66  IFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEI 106
           ++EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +AE+
Sbjct: 74  VYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEV 113

[Close]

BLAST of MELO3C031638.jh1 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 )

HSP 1 Score: 124.8 bits (312), Expect = 6.0e-29
Identity = 52/104 (50.00%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 3   SGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAA 62
           S  CAACK+LRR+C  +C+F+P+FP + PQ+F  VH+++GASNVAK L++L ++ R +A 
Sbjct: 5   SSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAV 64

Query: 63  ETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIA 107
            +L +EA+ R+ DPVYGCVG+IS LQH+L      L   + E+A
Sbjct: 65  NSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELA 108

The following BLAST results are available for this feature:

BLAST of MELO3C031638.jh1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439169.1	2.40e-108	100.00	PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]	[more]
XP_004140854.1	6.55e-102	95.39	LOB domain-containing protein 24 [Cucumis sativus] >KGN57342.1 hypothetical prot...	[more]
XP_023522202.1	2.97e-92	89.93	LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]	[more]
KAG7014789.1	1.41e-90	88.59	LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022985104.1	2.07e-90	88.67	LOB domain-containing protein 24-like [Cucurbita maxima]	[more]

BLAST of MELO3C031638.jh1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59467	1.2e-37	61.02	LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 S...	[more]
P59468	1.2e-37	62.50	LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 S...	[more]
Q8LBW3	4.3e-32	52.54	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	1.6e-31	58.00	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q9FKZ3	8.4e-28	50.00	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]

BLAST of MELO3C031638.jh1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AY36	1.16e-108	100.00	LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE...	[more]
A0A0A0L9N7	3.17e-102	95.39	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV...	[more]
A0A6J1JCD0	1.00e-90	88.67	LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC11148318...	[more]
A0A6J1E5I6	7.97e-90	87.92	LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430...	[more]
A0A0A0LLX6	3.48e-68	74.66	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV...	[more]

BLAST of MELO3C031638.jh1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26620.1	8.3e-39	61.02	LOB domain-containing protein 23	[more]
AT3G26660.1	8.3e-39	62.50	LOB domain-containing protein 24	[more]
AT2G30130.1	3.1e-33	52.54	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	1.2e-32	58.00	LOB domain-containing protein 4	[more]
AT5G66870.1	6.0e-29	50.00	ASYMMETRIC LEAVES 2-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..104
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..118
None	No IPR available	PANTHER	PTHR31301:SF120	LOB DOMAIN-CONTAINING PROTEIN 23-RELATED	coord: 1..118
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 5..102 e-value: 1.3E-38 score: 131.5
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 4..105 score: 24.08453

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C031638.jh1.t1	MELO3C031638.jh1.t1	mRNA