MELO3C031638.jh1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TAGCCGTTATCTATTGTCAATAAAAAACACACACTCTCCATATTTCACCATAAAATGTATATATACACAAAAGATTTGGAGAATCTTCATCCAAATCTTCTTCTCTCTTATTTTCTTCCAAAATCTAGATCTTGTCAAATATATTATATTCAGTTTGGATTTTTAGTATGATTTCTGGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGCCCTTCCGATTGTATCTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCTAGTAATGTTGCTAAATTCCTCCATGTAAGTTTATGATATATTTCATTTTCCACCTACCATTTTAACTTATCGTATCATATCATATCATATCTCTTATTTCCATTCTTTCTCACCACCTTACTTAATTATCTATATATATTTCTTAGTCACTCTTTTTTTTCTTTTTTTTTTTTGATAATTTAATCAGCAACTTCCTACACATTTAAGAGGTGAAGCAGCAGAAACTTTAATATTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTAGGGATTATTTCCCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTGAGATTGCTTGTGTGGCTTCCAATGTCCAAGAAGAACAGCCTCAACTCCAAGATTTTGCATTTCAGCCCATTCAAGGCCCAAATTCTGTTGGGTTCTCTCAAATTGGCCTTTCCAGTCCGGCCCATTGTTTTAATTCCAGCTTTTTCTAATTCATAACACGTTCTAAACATGGCTTCTACAGAAAGAAAAGTCCCTTTTCCTTTCA TAGCCGTTATCTATTGTCAATAAAAAACACACACTCTCCATATTTCACCATAAAATGTATATATACACAAAAGATTTGGAGAATCTTCATCCAAATCTTCTTCTCTCTTATTTTCTTCCAAAATCTAGATCTTGTCAAATATATTATATTCAGTTTGGATTTTTAGTATGATTTCTGGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGCCCTTCCGATTGTATCTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCTAGTAATGTTGCTAAATTCCTCCATCAACTTCCTACACATTTAAGAGGTGAAGCAGCAGAAACTTTAATATTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTAGGGATTATTTCCCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTGAGATTGCTTGTGTGGCTTCCAATGTCCAAGAAGAACAGCCTCAACTCCAAGATTTTGCATTTCAGCCCATTCAAGGCCCAAATTCTGTTGGGTTCTCTCAAATTGGCCTTTCCAGTCCGGCCCATTGTTTTAATTCCAGCTTTTTCTAATTCATAACACGTTCTAAACATGGCTTCTACAGAAAGAAAAGTCCCTTTTCCTTTCA ATGATTTCTGGTCGTTGTGCAGCTTGTAAATATTTAAGAAGAAGATGCCCTTCCGATTGTATCTTTTCCCCTTTCTTTCCTTCCAATAATCCTCAAAGATTCACCATTGTTCATCGAATTTATGGTGCTAGTAATGTTGCTAAATTCCTCCATCAACTTCCTACACATTTAAGAGGTGAAGCAGCAGAAACTTTAATATTTGAGGCAAAATGCAGAATTGAAGATCCAGTTTATGGATGTGTAGGGATTATTTCCCAATTACAACATCAATTACACGTGGCAGAAACCCAGTTGGCCAAGACTCGAGCTGAGATTGCTTGTGTGGCTTCCAATGTCCAAGAAGAACAGCCTCAACTCCAAGATTTTGCATTTCAGCCCATTCAAGGCCCAAATTCTGTTGGGTTCTCTCAAATTGGCCTTTCCAGTCCGGCCCATTGTTTTAATTCCAGCTTTTTCTAA MISGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFTIVHRIYGASNVAKFLHQLPTHLRGEAAETLIFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAEIACVASNVQEEQPQLQDFAFQPIQGPNSVGFSQIGLSSPAHCFNSSFF Homology
BLAST of MELO3C031638.jh1 vs. NCBI nr
Match: XP_008439169.1 (PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]) HSP 1 Score: 315 bits (806), Expect = 2.40e-108 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. NCBI nr
Match: XP_004140854.1 (LOB domain-containing protein 24 [Cucumis sativus] >KGN57342.1 hypothetical protein Csa_009713 [Cucumis sativus]) HSP 1 Score: 298 bits (764), Expect = 6.55e-102 Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. NCBI nr
Match: XP_023522202.1 (LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 274 bits (700), Expect = 2.97e-92 Identity = 134/149 (89.93%), Postives = 139/149 (93.29%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. NCBI nr
Match: KAG7014789.1 (LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 270 bits (689), Expect = 1.41e-90 Identity = 132/149 (88.59%), Postives = 138/149 (92.62%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. NCBI nr
Match: XP_022985104.1 (LOB domain-containing protein 24-like [Cucurbita maxima]) HSP 1 Score: 269 bits (688), Expect = 2.07e-90 Identity = 133/150 (88.67%), Postives = 139/150 (92.67%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. ExPASy Swiss-Prot
Match: P59467 (LOB domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=LBD23 PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37 Identity = 72/118 (61.02%), Postives = 88/118 (74.58%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. ExPASy Swiss-Prot
Match: P59468 (LOB domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=LBD24 PE=2 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.2e-37 Identity = 70/112 (62.50%), Postives = 86/112 (76.79%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2) HSP 1 Score: 139.0 bits (349), Expect = 4.3e-32 Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.6e-31 Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 8.4e-28 Identity = 52/104 (50.00%), Postives = 76/104 (73.08%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. ExPASy TrEMBL
Match: A0A1S3AY36 (LOB domain-containing protein 24-like OS=Cucumis melo OX=3656 GN=LOC103484045 PE=3 SV=1) HSP 1 Score: 315 bits (806), Expect = 1.16e-108 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. ExPASy TrEMBL
Match: A0A0A0L9N7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G180300 PE=3 SV=1) HSP 1 Score: 298 bits (764), Expect = 3.17e-102 Identity = 145/152 (95.39%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. ExPASy TrEMBL
Match: A0A6J1JCD0 (LOB domain-containing protein 24-like OS=Cucurbita maxima OX=3661 GN=LOC111483182 PE=3 SV=1) HSP 1 Score: 269 bits (688), Expect = 1.00e-90 Identity = 133/150 (88.67%), Postives = 139/150 (92.67%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. ExPASy TrEMBL
Match: A0A6J1E5I6 (LOB domain-containing protein 24-like OS=Cucurbita moschata OX=3662 GN=LOC111430896 PE=3 SV=1) HSP 1 Score: 267 bits (682), Expect = 7.97e-90 Identity = 131/149 (87.92%), Postives = 137/149 (91.95%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. ExPASy TrEMBL
Match: A0A0A0LLX6 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G373510 PE=3 SV=1) HSP 1 Score: 212 bits (540), Expect = 3.48e-68 Identity = 109/146 (74.66%), Postives = 119/146 (81.51%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. TAIR 10
Match: AT3G26620.1 (LOB domain-containing protein 23 ) HSP 1 Score: 157.5 bits (397), Expect = 8.3e-39 Identity = 72/118 (61.02%), Postives = 88/118 (74.58%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. TAIR 10
Match: AT3G26660.1 (LOB domain-containing protein 24 ) HSP 1 Score: 157.5 bits (397), Expect = 8.3e-39 Identity = 70/112 (62.50%), Postives = 86/112 (76.79%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 139.0 bits (349), Expect = 3.1e-33 Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 ) HSP 1 Score: 137.1 bits (344), Expect = 1.2e-32 Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of MELO3C031638.jh1 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 ) HSP 1 Score: 124.8 bits (312), Expect = 6.0e-29 Identity = 52/104 (50.00%), Postives = 76/104 (73.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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