MELO3C029332 (gene) Melon (DHL92) v4

Overview


Name	MELO3C029332
Type	gene
Organism	Cucumis melo cv. DHL92 (Melon (DHL92) v4)
Description	ABC transporter C family member 2-like
Location	chr02: 5822683 .. 5823081 (+)
RNA-Seq Expression	MELO3C029332
Synteny	MELO3C029332

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTTAGCTTAGTGGGAGTTGTTGGAAGTACGGGGGAAGGGGACATCACTACTTTCAGCCATGCTTGGAGAACTTTCACCAATGCCTAGGAATGCAGATGCAAATGCTACTGTTTTTATTCAAGGAGTTGTTACTTATGTTCCACAAGTTTCATGGATTTTTAATGCAACAGTAAGTATCAATATTATACAATAATTAATTACTTCTTGACTATTACTTTACTTTAATTGCATTGCTTATGCATTTTTAATCAATTTATCAATGTGTGATAATATTTTATTTGGAGCTACATTTGATTATGCCAAATATGAAAAGATAATCGATATAACTTCATTTTTTCATACCTAGGGCTTGAAGAATCCTCGAGATAGTGGCAGTGCTTGTTGAATTTTTATGAAA

mRNA sequence

TCGTTAGCTTAGTGGGAGTTGTTGGAAGTACGGGGGAAGGGGACATCACTACTTTCAGCCATGCTTGGAGAACTTTCACCAATGCCTAGGAATGCAGATGCAAATGCTACTGTTTTTATTCAAGGAGTTGTTACTTATGTTCCACAAGTTTCATGGATTTTTAATGCAACAATGTGTGATAATATTTTATTTGGAGCTACATTTGATTATGCCAAATATGAAAAGATAATCGATATAACTTCATTTTTTCATACCTAGGGCTTGAAGAATCCTCGAGATAGTGGCAGTGCTTGTTGAATTTTTATGAAA

Coding sequence (CDS)

ATGCTTGGAGAACTTTCACCAATGCCTAGGAATGCAGATGCAAATGCTACTGTTTTTATTCAAGGAGTTGTTACTTATGTTCCACAAGTTTCATGGATTTTTAATGCAACAATGTGTGATAATATTTTATTTGGAGCTACATTTGATTATGCCAAATATGAAAAGATAATCGATATAACTTCATTTTTTCATACCTAG

Protein sequence

MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDITSFFHT

Homology

[Close]

BLAST of MELO3C029332 vs. NCBI nr
Match: TYK01412.1 (ABC transporter C family member 2-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18
Identity = 49/61 (80.33%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL P+P +ADANATVFIQGVV YVPQVSWIFNAT+ +NILFGATFD AKY+K IDIT
Sbjct: 289 MLGELPPVPGDADANATVFIQGVVAYVPQVSWIFNATVRENILFGATFDSAKYKKTIDIT 348

Query: 61  S 62
           +
Sbjct: 349 A 349

[Close]

BLAST of MELO3C029332 vs. NCBI nr
Match: EOX96954.1 (Multidrug resistance-associated protein 2 isoform 1 [Theobroma cacao])

HSP 1 Score: 83.6 bits (205), Expect = 7.0e-13
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL PM     ++A+V I+G V YVPQVSWIFNAT+CDNILFG+ F+ A+YEK IDIT
Sbjct: 663 MLGELPPM-----SDASVVIRGTVAYVPQVSWIFNATVCDNILFGSPFEAARYEKAIDIT 721

Query: 61  SFFH 65
           +  H
Sbjct: 723 ALQH 721

[Close]

BLAST of MELO3C029332 vs. NCBI nr
Match: EOX96956.1 (Multidrug resistance-associated protein 2 isoform 3 [Theobroma cacao])

HSP 1 Score: 83.6 bits (205), Expect = 7.0e-13
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL PM     ++A+V I+G V YVPQVSWIFNAT+CDNILFG+ F+ A+YEK IDIT
Sbjct: 333 MLGELPPM-----SDASVVIRGTVAYVPQVSWIFNATVCDNILFGSPFEAARYEKAIDIT 391

Query: 61  SFFH 65
           +  H
Sbjct: 393 ALQH 391

[Close]

BLAST of MELO3C029332 vs. NCBI nr
Match: EOX96955.1 (Multidrug resistance-associated protein 2 isoform 2, partial [Theobroma cacao])

HSP 1 Score: 83.6 bits (205), Expect = 7.0e-13
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL PM     ++A+V I+G V YVPQVSWIFNAT+CDNILFG+ F+ A+YEK IDIT
Sbjct: 457 MLGELPPM-----SDASVVIRGTVAYVPQVSWIFNATVCDNILFGSPFEAARYEKAIDIT 515

Query: 61  SFFH 65
           +  H
Sbjct: 517 ALQH 515

[Close]

BLAST of MELO3C029332 vs. NCBI nr
Match: XP_022762661.1 (ABC transporter C family member 2-like [Durio zibethinus])

HSP 1 Score: 83.2 bits (204), Expect = 9.2e-13
Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL PM     ++A+V I+G V YVPQVSWIFNAT+CDNILFG+ F+ A+YEK ID+T
Sbjct: 663 MLGELPPM-----SDASVVIRGTVAYVPQVSWIFNATVCDNILFGSPFESARYEKAIDVT 721

Query: 61  SFFH 65
           +  H
Sbjct: 723 ALQH 721

[Close]

BLAST of MELO3C029332 vs. ExPASy Swiss-Prot
Match: Q9C8G9 (ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 6.6e-14
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL      A ++ATV ++G V YVPQVSWIFNAT+ DNILFGA FD  KYE++ID+T
Sbjct: 662 MLGELP-----ARSDATVTLRGSVAYVPQVSWIFNATVRDNILFGAPFDQEKYERVIDVT 720

Query: 61  SFFH 65
           +  H
Sbjct: 722 ALQH 720

[Close]

BLAST of MELO3C029332 vs. ExPASy Swiss-Prot
Match: Q42093 (ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 2.8e-12
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           +LGEL      A ++A V ++G V YVPQVSWIFNAT+ DNILFG+ FD  KYE+ ID+T
Sbjct: 662 ILGELP-----ATSDAIVTLRGSVAYVPQVSWIFNATVRDNILFGSPFDREKYERAIDVT 720

Query: 61  SFFH 65
           S  H
Sbjct: 722 SLKH 720

[Close]

BLAST of MELO3C029332 vs. ExPASy Swiss-Prot
Match: Q9C8H1 (ABC transporter C family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCC11 PE=2 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 9.9e-10
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGELS         ++V I+G V YVPQVSWIFNAT+ +NILFG+ F+  +Y + ID+T
Sbjct: 663 MLGELSHA-----ETSSVDIRGSVAYVPQVSWIFNATLRENILFGSDFESERYWRAIDVT 721

Query: 61  SFFH 65
           +  H
Sbjct: 723 ALQH 721

[Close]

BLAST of MELO3C029332 vs. ExPASy Swiss-Prot
Match: Q9C8H0 (ABC transporter C family member 12 OS=Arabidopsis thaliana OX=3702 GN=ABCC12 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-09
Identity = 34/64 (53.12%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGELS    +A+  + V I+G V YVPQVSWIFNAT+ +NILFG+ F+  +Y + ID T
Sbjct: 663 MLGELS----HAETTSVV-IRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDAT 721

Query: 61  SFFH 65
           +  H
Sbjct: 723 ALQH 721

[Close]

BLAST of MELO3C029332 vs. ExPASy Swiss-Prot
Match: Q54JR2 (ABC transporter C family member 3 OS=Dictyostelium discoideum OX=44689 GN=abcC3 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.1e-08
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDI 60
           MLGE+  +      + +V ++G V YVPQ +WI NAT+ DNILFG+ +D AKY K++++
Sbjct: 487 MLGEMDVL------DGSVAMKGNVAYVPQQAWIINATLKDNILFGSPYDEAKYRKVLEV 539

[Close]

BLAST of MELO3C029332 vs. ExPASy TrEMBL
Match: A0A5D3BRL7 (ABC transporter C family member 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G001130 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.1e-19
Identity = 49/61 (80.33%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL P+P +ADANATVFIQGVV YVPQVSWIFNAT+ +NILFGATFD AKY+K IDIT
Sbjct: 289 MLGELPPVPGDADANATVFIQGVVAYVPQVSWIFNATVRENILFGATFDSAKYKKTIDIT 348

Query: 61  S 62
           +
Sbjct: 349 A 349

[Close]

BLAST of MELO3C029332 vs. ExPASy TrEMBL
Match: A0A061DXZ5 (Multidrug resistance-associated protein 2 isoform 3 OS=Theobroma cacao OX=3641 GN=TCM_006080 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.4e-13
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL PM     ++A+V I+G V YVPQVSWIFNAT+CDNILFG+ F+ A+YEK IDIT
Sbjct: 333 MLGELPPM-----SDASVVIRGTVAYVPQVSWIFNATVCDNILFGSPFEAARYEKAIDIT 391

Query: 61  SFFH 65
           +  H
Sbjct: 393 ALQH 391

[Close]

BLAST of MELO3C029332 vs. ExPASy TrEMBL
Match: A0A061DW72 (Multidrug resistance-associated protein 2 isoform 2 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_006080 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.4e-13
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL PM     ++A+V I+G V YVPQVSWIFNAT+CDNILFG+ F+ A+YEK IDIT
Sbjct: 457 MLGELPPM-----SDASVVIRGTVAYVPQVSWIFNATVCDNILFGSPFEAARYEKAIDIT 515

Query: 61  SFFH 65
           +  H
Sbjct: 517 ALQH 515

[Close]

BLAST of MELO3C029332 vs. ExPASy TrEMBL
Match: A0A061DVW6 (Multidrug resistance-associated protein 2 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_006080 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.4e-13
Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL PM     ++A+V I+G V YVPQVSWIFNAT+CDNILFG+ F+ A+YEK IDIT
Sbjct: 663 MLGELPPM-----SDASVVIRGTVAYVPQVSWIFNATVCDNILFGSPFEAARYEKAIDIT 721

Query: 61  SFFH 65
           +  H
Sbjct: 723 ALQH 721

[Close]

BLAST of MELO3C029332 vs. ExPASy TrEMBL
Match: A0A6P6AD05 (ABC transporter C family member 2-like OS=Durio zibethinus OX=66656 GN=LOC111308549 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 4.4e-13
Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL PM     ++A+V I+G V YVPQVSWIFNAT+CDNILFG+ F+ A+YEK ID+T
Sbjct: 663 MLGELPPM-----SDASVVIRGTVAYVPQVSWIFNATVCDNILFGSPFESARYEKAIDVT 721

Query: 61  SFFH 65
           +  H
Sbjct: 723 ALQH 721

[Close]

BLAST of MELO3C029332 vs. TAIR 10
Match: AT1G30400.1 (multidrug resistance-associated protein 1 )

HSP 1 Score: 77.4 bits (189), Expect = 4.7e-15
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL      A ++ATV ++G V YVPQVSWIFNAT+ DNILFGA FD  KYE++ID+T
Sbjct: 662 MLGELP-----ARSDATVTLRGSVAYVPQVSWIFNATVRDNILFGAPFDQEKYERVIDVT 720

Query: 61  SFFH 65
           +  H
Sbjct: 722 ALQH 720

[Close]

BLAST of MELO3C029332 vs. TAIR 10
Match: AT1G30400.2 (multidrug resistance-associated protein 1 )

HSP 1 Score: 77.4 bits (189), Expect = 4.7e-15
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGEL      A ++ATV ++G V YVPQVSWIFNAT+ DNILFGA FD  KYE++ID+T
Sbjct: 662 MLGELP-----ARSDATVTLRGSVAYVPQVSWIFNATVRDNILFGAPFDQEKYERVIDVT 720

Query: 61  SFFH 65
           +  H
Sbjct: 722 ALQH 720

[Close]

BLAST of MELO3C029332 vs. TAIR 10
Match: AT2G34660.1 (multidrug resistance-associated protein 2 )

HSP 1 Score: 72.0 bits (175), Expect = 2.0e-13
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           +LGEL      A ++A V ++G V YVPQVSWIFNAT+ DNILFG+ FD  KYE+ ID+T
Sbjct: 662 ILGELP-----ATSDAIVTLRGSVAYVPQVSWIFNATVRDNILFGSPFDREKYERAIDVT 720

Query: 61  SFFH 65
           S  H
Sbjct: 722 SLKH 720

[Close]

BLAST of MELO3C029332 vs. TAIR 10
Match: AT2G34660.2 (multidrug resistance-associated protein 2 )

HSP 1 Score: 72.0 bits (175), Expect = 2.0e-13
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           +LGEL      A ++A V ++G V YVPQVSWIFNAT+ DNILFG+ FD  KYE+ ID+T
Sbjct: 662 ILGELP-----ATSDAIVTLRGSVAYVPQVSWIFNATVRDNILFGSPFDREKYERAIDVT 720

Query: 61  SFFH 65
           S  H
Sbjct: 722 SLKH 720

[Close]

BLAST of MELO3C029332 vs. TAIR 10
Match: AT1G30420.1 (multidrug resistance-associated protein 12 )

HSP 1 Score: 63.5 bits (153), Expect = 7.0e-11
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 1   MLGELSPMPRNADANATVFIQGVVTYVPQVSWIFNATMCDNILFGATFDYAKYEKIIDIT 60
           MLGELS         ++V I+G V YVPQVSWIFNAT+ +NILFG+ F+  +Y + ID+T
Sbjct: 663 MLGELSHA-----ETSSVDIRGSVAYVPQVSWIFNATLRENILFGSDFESERYWRAIDVT 721

Query: 61  SFFH 65
           +  H
Sbjct: 723 ALQH 721

The following BLAST results are available for this feature:

BLAST of MELO3C029332 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01412.1	1.5e-18	80.33	ABC transporter C family member 2-like isoform X2 [Cucumis melo var. makuwa]	[more]
EOX96954.1	7.0e-13	64.06	Multidrug resistance-associated protein 2 isoform 1 [Theobroma cacao]	[more]
EOX96956.1	7.0e-13	64.06	Multidrug resistance-associated protein 2 isoform 3 [Theobroma cacao]	[more]
EOX96955.1	7.0e-13	64.06	Multidrug resistance-associated protein 2 isoform 2, partial [Theobroma cacao]	[more]
XP_022762661.1	9.2e-13	62.50	ABC transporter C family member 2-like [Durio zibethinus]	[more]

BLAST of MELO3C029332 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8G9	6.6e-14	60.94	ABC transporter C family member 1 OS=Arabidopsis thaliana OX=3702 GN=ABCC1 PE=1 ...	[more]
Q42093	2.8e-12	57.81	ABC transporter C family member 2 OS=Arabidopsis thaliana OX=3702 GN=ABCC2 PE=1 ...	[more]
Q9C8H1	9.9e-10	51.56	ABC transporter C family member 11 OS=Arabidopsis thaliana OX=3702 GN=ABCC11 PE=...	[more]
Q9C8H0	1.7e-09	53.13	ABC transporter C family member 12 OS=Arabidopsis thaliana OX=3702 GN=ABCC12 PE=...	[more]
Q54JR2	4.1e-08	45.76	ABC transporter C family member 3 OS=Dictyostelium discoideum OX=44689 GN=abcC3 ...	[more]

BLAST of MELO3C029332 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BRL7	7.1e-19	80.33	ABC transporter C family member 2-like isoform X2 OS=Cucumis melo var. makuwa OX...	[more]
A0A061DXZ5	3.4e-13	64.06	Multidrug resistance-associated protein 2 isoform 3 OS=Theobroma cacao OX=3641 G...	[more]
A0A061DW72	3.4e-13	64.06	Multidrug resistance-associated protein 2 isoform 2 (Fragment) OS=Theobroma caca...	[more]
A0A061DVW6	3.4e-13	64.06	Multidrug resistance-associated protein 2 isoform 1 OS=Theobroma cacao OX=3641 G...	[more]
A0A6P6AD05	4.4e-13	62.50	ABC transporter C family member 2-like OS=Durio zibethinus OX=66656 GN=LOC111308...	[more]

BLAST of MELO3C029332 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30400.1	4.7e-15	60.94	multidrug resistance-associated protein 1	[more]
AT1G30400.2	4.7e-15	60.94	multidrug resistance-associated protein 1	[more]
AT2G34660.1	2.0e-13	57.81	multidrug resistance-associated protein 2	[more]
AT2G34660.2	2.0e-13	57.81	multidrug resistance-associated protein 2	[more]
AT1G30420.1	7.0e-11	51.56	multidrug resistance-associated protein 12	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (DHL92) v4
Date Performed: 2022-08-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..63 e-value: 1.7E-6 score: 29.7
None	No IPR available	PANTHER	PTHR24223:SF379	ABC TRANSPORTER C FAMILY MEMBER 1	coord: 11..64
None	No IPR available	PANTHER	PTHR24223	ATP-BINDING CASSETTE SUB-FAMILY C	coord: 11..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C029332.1	MELO3C029332.1	mRNA