Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAATGGAAGTCCTCCTGGTGCATTTAACACAGACAATCCAGCTTCGAGCATAGGCAGCACAACAGGGTTTGGAACTGAGATCCCTCCAAGCTCAAGCACTTCAATATCCATAGCGGCTGGATTGAGACCCTTTACTTGCTTCATCATTCTCACCATGTCCTTCATCACTCACAGAATAATCACTCTGGACTGATGATGAAATGAAATCACCGACTTCTCCTTCTACTGTACATGAAAAGGCCCTCGTTATTCATAGCTTCAGAATCGTCGCCCAGTTCCACCATTAGTGCAATTTTTGGAGGAGAAAAAGGAACCAGAGGTGAGTTTGAGTTTGGAAGGATAAACCACTGCCACTGCCCTGCTTGAGCTTTTGTTTGTGTAAAGATCAAAGATAGGGATGTATTAGTATTAGCTACTTCCAACTTGAGACTCTGTAATATAATATAATGTTTGTTAGATTTCGGGACTTGTCTTGCTGTTGATCATTGTGCATTAAGATTAAAATTTTAGTTAGAAGAAACAGAGACACATAACTCGACTTGGAAGTATTTCTGTTCCTATGTTTAAGTCTTGAATGTTTTTTATGGGTTAATGATTAATTTATTGTTTATTTACGTATGAGTTGCAATTGCATGATGAGCTGTTGCTGAACTTTCGTGTGAAATTATATTAGTTAACTTGCTCTTCTCCATCCAGT
mRNA sequence
GAAATGGAAGTCCTCCTGGTGCATTTAACACAGACAATCCAGCTTCGAGCATAGGCAGCACAACAGGGTTTGGAACTGAGATCCCTCCAAGCTCAAGCACTTCAATATCCATAGCGGCTGGATTGAGACCCTTTACTTGCTTCATCATTCTCACCATGTCCTTCATCACTCACAGAATAATCACTCTGGACTGATGATGAAATGAAATCACCGACTTCTCCTTCTACTGTACATGAAAAGGCCCTCGTTATTCATAGCTTCAGAATCGTCGCCCAGTTCCACCATTAGTGCAATTTTTGGAGGAGAAAAAGGAACCAGAGGTGAGTTTGAGTTTGGAAGGATAAACCACTGCCACTGCCCTGCTTGAGCTTTTGTTTGTGTAAAGATCAAAGATAGGGATGTATTAGTATTAGCTACTTCCAACTTGAGACTCTGTAATATAATATAATGTTTGTTAGATTTCGGGACTTGTCTTGCTGTTGATCATTGTGCATTAAGATTAAAATTTTAGTTAGAAGAAACAGAGACACATAACTCGACTTGGAAGTATTTCTGTTCCTATGTTTAAGTCTTGAATGTTTTTTATGGGTTAATGATTAATTTATTGTTTATTTACGTATGAGTTGCAATTGCATGATGAGCTGTTGCTGAACTTTCGTGTGAAATTATATTAGTTAACTTGCTCTTCTCCATCCAGT
Coding sequence (CDS)
AATGGAAGTCCTCCTGGTGCATTTAACACAGACAATCCAGCTTCGAGCATAGGCAGCACAACAGGGTTTGGAACTGAGATCCCTCCAAGCTCAAGCACTTCAATATCCATAGCGGCTGGATTGAGACCCTTTACTTGCTTCATCATTCTCACCATGTCCTTCATCACTCACAGAATAATCACTCTGGACTGA
Protein sequence
NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRIITLD
Homology
BLAST of MELO3C029279 vs. NCBI nr
Match:
XP_008450517.1 (PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Cucumis melo] >KAA0050964.1 glucan endo-1,3-beta-glucosidase 4 [Cucumis melo var. makuwa] >TYK10310.1 glucan endo-1,3-beta-glucosidase 4 [Cucumis melo var. makuwa])
HSP 1 Score: 120.9 bits (302), Expect = 3.8e-24
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
Query: 1 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII 60
NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII
Sbjct: 300 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII 359
Query: 61 TLD 64
TLD
Sbjct: 360 TLD 362
BLAST of MELO3C029279 vs. NCBI nr
Match:
KGN66453.2 (hypothetical protein Csa_007420 [Cucumis sativus])
HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0
Query: 1 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII 60
NGSPPG FNTDNPASSIGSTTGFGTEIPPSSSTSIS+AAGLRPFTCFIILTMSFITHRII
Sbjct: 287 NGSPPGVFNTDNPASSIGSTTGFGTEIPPSSSTSISVAAGLRPFTCFIILTMSFITHRII 346
Query: 61 TLD 64
TLD
Sbjct: 347 TLD 349
BLAST of MELO3C029279 vs. NCBI nr
Match:
XP_004135574.1 (mucin-5AC [Cucumis sativus])
HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0
Query: 1 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII 60
NGSPPG FNTDNPASSIGSTTGFGTEIPPSSSTSIS+AAGLRPFTCFIILTMSFITHRII
Sbjct: 300 NGSPPGVFNTDNPASSIGSTTGFGTEIPPSSSTSISVAAGLRPFTCFIILTMSFITHRII 359
Query: 61 TLD 64
TLD
Sbjct: 360 TLD 362
BLAST of MELO3C029279 vs. NCBI nr
Match:
XP_038879241.1 (mucin-2 isoform X1 [Benincasa hispida])
HSP 1 Score: 105.5 bits (262), Expect = 1.7e-19
Identity = 56/63 (88.89%), Postives = 58/63 (92.06%), Query Frame = 0
Query: 1 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII 60
NGSPPG FNTDNPASSIGSTTGFGTEIPPSSSTSIS+AAGLRPFTC IILT+S IT II
Sbjct: 303 NGSPPGVFNTDNPASSIGSTTGFGTEIPPSSSTSISMAAGLRPFTCCIILTISLITRLII 362
Query: 61 TLD 64
TLD
Sbjct: 363 TLD 365
BLAST of MELO3C029279 vs. NCBI nr
Match:
XP_038879242.1 (mucin-2 isoform X2 [Benincasa hispida])
HSP 1 Score: 105.5 bits (262), Expect = 1.7e-19
Identity = 56/63 (88.89%), Postives = 58/63 (92.06%), Query Frame = 0
Query: 1 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII 60
NGSPPG FNTDNPASSIGSTTGFGTEIPPSSSTSIS+AAGLRPFTC IILT+S IT II
Sbjct: 297 NGSPPGVFNTDNPASSIGSTTGFGTEIPPSSSTSISMAAGLRPFTCCIILTISLITRLII 356
Query: 61 TLD 64
TLD
Sbjct: 357 TLD 359
BLAST of MELO3C029279 vs. ExPASy TrEMBL
Match:
A0A5A7U6N8 (Glucan endo-1,3-beta-glucosidase 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004640 PE=4 SV=1)
HSP 1 Score: 120.9 bits (302), Expect = 1.9e-24
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
Query: 1 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII 60
NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII
Sbjct: 300 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII 359
Query: 61 TLD 64
TLD
Sbjct: 360 TLD 362
BLAST of MELO3C029279 vs. ExPASy TrEMBL
Match:
A0A1S3BQE9 (glucan endo-1,3-beta-glucosidase 4 OS=Cucumis melo OX=3656 GN=LOC103492098 PE=4 SV=1)
HSP 1 Score: 120.9 bits (302), Expect = 1.9e-24
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
Query: 1 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII 60
NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII
Sbjct: 300 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII 359
Query: 61 TLD 64
TLD
Sbjct: 360 TLD 362
BLAST of MELO3C029279 vs. ExPASy TrEMBL
Match:
A0A0A0M1B6 (Hydrolase, hydrolyzing O-glycosyl compounds OS=Cucumis sativus OX=3659 GN=Csa_1G560700 PE=4 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 7.1e-24
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0
Query: 1 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII 60
NGSPPG FNTDNPASSIGSTTGFGTEIPPSSSTSIS+AAGLRPFTCFIILTMSFITHRII
Sbjct: 300 NGSPPGVFNTDNPASSIGSTTGFGTEIPPSSSTSISVAAGLRPFTCFIILTMSFITHRII 359
Query: 61 TLD 64
TLD
Sbjct: 360 TLD 362
BLAST of MELO3C029279 vs. ExPASy TrEMBL
Match:
A0A6J1HC94 (mucin-2 OS=Cucurbita moschata OX=3662 GN=LOC111462029 PE=4 SV=1)
HSP 1 Score: 90.1 bits (222), Expect = 3.5e-15
Identity = 48/59 (81.36%), Postives = 52/59 (88.14%), Query Frame = 0
Query: 1 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRI 60
NG+PP FN DNPASSIGS+TGFGTEIPPSSSTSIS+AAGLRPFT II+TMS IT RI
Sbjct: 302 NGTPPAVFNPDNPASSIGSSTGFGTEIPPSSSTSISMAAGLRPFTWCIIMTMSLITRRI 360
BLAST of MELO3C029279 vs. ExPASy TrEMBL
Match:
A0A6J1HUD2 (mucin-2 OS=Cucurbita maxima OX=3661 GN=LOC111467890 PE=4 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 4.6e-15
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0
Query: 1 NGSPPGAFNTDNPASSIGSTTGFGTEIPPSSSTSISIAAGLRPFTCFIILTMSFITHRII 60
NG+PP FN DNP+SSIGS+TGFGTEIPPSSSTSIS+AAGLRPFT II+TMS IT RII
Sbjct: 302 NGTPPAIFNPDNPSSSIGSSTGFGTEIPPSSSTSISMAAGLRPFTWCIIMTMSLITRRII 361
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U6N8 | 1.9e-24 | 100.00 | Glucan endo-1,3-beta-glucosidase 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
A0A1S3BQE9 | 1.9e-24 | 100.00 | glucan endo-1,3-beta-glucosidase 4 OS=Cucumis melo OX=3656 GN=LOC103492098 PE=4 ... | [more] |
A0A0A0M1B6 | 7.1e-24 | 96.83 | Hydrolase, hydrolyzing O-glycosyl compounds OS=Cucumis sativus OX=3659 GN=Csa_1G... | [more] |
A0A6J1HC94 | 3.5e-15 | 81.36 | mucin-2 OS=Cucurbita moschata OX=3662 GN=LOC111462029 PE=4 SV=1 | [more] |
A0A6J1HUD2 | 4.6e-15 | 80.00 | mucin-2 OS=Cucurbita maxima OX=3661 GN=LOC111467890 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |