Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAAGCATATGCATTGTATATAATATCCACAAACTTGGCCCTACCACCTTCTTCTTTCTTCGATAATACCCTTTAAATATCCAACTCAATAAACTTCAATGCAATTCTTCAAACTCTTTGACATCGATCTCTGCGTGATTTCTTGTTAATTCTGAGTTTACCATGTTGGTTGTTGAGTTTAAGGAGCAGCTTTTTTTTGATAAAGCTCTTCGGTTCCTCGCCGAAGCTTTGAAGACTATCGCCTTGGCTTTGCTCCTATCTCTTCTCGCTCTGGGTATGCTGTCTCTCATCTCAATAAGTTATTTGATACACTATATATAACATCATGGATTGGGGTTTAATTAATCAATATGGTTGCAAAAATAGTTAAAGAATCAGTATAATTGTTTTTGTTTTTCGGCCTTGAATGAATTTGTACACAGTTGGTGCGTGTGTGGGGACTGTGATCGGAGCTTTCAAAGGCCATGGCGCGGCGATAGGCGCTATTGCCGGTGCGGCCGTAGCCCTTCAGATAGTGAGCTGCACTGCATCTGGGCAAAGATATTATTGTTTATCAAGGGTAGGCTTTTCATTATATCAAAGGTTAGAAGGAAATGTCATTTGAAAGAATGATACAGATTTAAAAAACTTCAAGTTATAGGTTTATTTCTTTAATTGTGTGTTTAACACATAACTAAAACTCTAAAAATGTCTAACAACCTTTCTACAAAATATTCAATTTTATATTTAAATATATTATATTTTGGATTCAATTTTTTCAAAAAGGAAGTAATATATTTTTAATTATATTGAAATGAAAAAACAAATATTTTAAAGACTAAATTTATTTGCTATTTACAGCTATGTTTGCTAATATATATATATATATATTTTAATATATATATATATATATATATATATATATATATATATATCAAACGATTAACTTTTAATATCAATGTTTAATTTTATTTTTGTTTGCGTCTTTCTAAGACTGCATTTGATAGTGGCAGGAAGCAATAATGGAGAGCCTGATGGATGGGAAGGGGTTGATGAACTGGGTAAGTGAAAAAGCTTGAATGCTACCTTTAATGGCGGATTATTTAAGATTCAATATTTTTCTAAAAGACAATATTTTAGGCAAGCAACTTCTCCGAGTATATGCATCGAGAGATATCAGAGTTTGTCGATGTGGCTGGAGAAAGTTGTGCTGAAGGGTTGTCAATGGAGAGTGTTCAAATGTTGCCTGTTTGTGAATATGATCACAGCACCATCAACTCCATTTCTTGTTCCATTTGCTTAGAGGTAATATTTCTATATATAGATACATATATATATATATATTTAGTTATAAACTCTGCAAAAGTTAATCCAAATTAGTATTAAATTATTCTTATTTTTAATTTTGATTTTGTTTTTCTATAGGTTATATCACAAGTTTCATGTATAACAGTATAA
mRNA sequence
GTAAGCATATGCATTGTATATAATATCCACAAACTTGGCCCTACCACCTTCTTCTTTCTTCGATAATACCCTTTAAATATCCAACTCAATAAACTTCAATGCAATTCTTCAAACTCTTTGACATCGATCTCTGCGTGATTTCTTGTTAATTCTGAGTTTACCATGTTGGTTGTTGAGTTTAAGGAGCAGCTTTTTTTTGATAAAGCTCTTCGGTTCCTCGCCGAAGCTTTGAAGACTATCGCCTTGGCTTTGCTCCTATCTCTTCTCGCTCTGGTTGGTGCGTGTGTGGGGACTGTGATCGGAGCTTTCAAAGGCCATGGCGCGGCGATAGGCGCTATTGCCGGTGCGGCCGTAGCCCTTCAGATAGTGAGCTGCACTGCATCTGGGCAAAGATATTATTGTTTATCAAGGGTAGGCTTTTCATTATATCAAAGACTGCATTTGATAGTGGCAGGAAGCAATAATGGAGAGCCTGATGGATGGGAAGGGGTTGATGAACTGGGCAAGCAACTTCTCCGAGTATATGCATCGAGAGATATCAGAGTTTGTCGATGTGGCTGGAGAAAGTTGTGCTGAAGGGTTGTCAATGGAGAGTGTTCAAATGTTGCCTGTTTGTGAATATGATCACAGCACCATCAACTCCATTTCTTGTTCCATTTGCTTAGAGGTTATATCACAAGTTTCATGTATAACAGTATAA
Coding sequence (CDS)
ATGTTGGTTGTTGAGTTTAAGGAGCAGCTTTTTTTTGATAAAGCTCTTCGGTTCCTCGCCGAAGCTTTGAAGACTATCGCCTTGGCTTTGCTCCTATCTCTTCTCGCTCTGGTTGGTGCGTGTGTGGGGACTGTGATCGGAGCTTTCAAAGGCCATGGCGCGGCGATAGGCGCTATTGCCGGTGCGGCCGTAGCCCTTCAGATAGTGAGCTGCACTGCATCTGGGCAAAGATATTATTGTTTATCAAGGGTAGGCTTTTCATTATATCAAAGACTGCATTTGATAGTGGCAGGAAGCAATAATGGAGAGCCTGATGGATGGGAAGGGGTTGATGAACTGGGCAAGCAACTTCTCCGAGTATATGCATCGAGAGATATCAGAGTTTGTCGATGTGGCTGGAGAAAGTTGTGCTGA
Protein sequence
MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIAGAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDELGKQLLRVYASRDIRVCRCGWRKLC
Homology
BLAST of MELO3C028997 vs. NCBI nr
Match:
TYK23118.1 (NEP1-interacting protein-like 2 isoform X2 [Cucumis melo var. makuwa])
HSP 1 Score: 211.8 bits (538), Expect = 3.6e-51
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
Query: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA
Sbjct: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
Query: 61 GAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDEL 114
GAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDEL
Sbjct: 61 GAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDEL 113
BLAST of MELO3C028997 vs. NCBI nr
Match:
XP_008447739.1 (PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Cucumis melo])
HSP 1 Score: 147.1 bits (370), Expect = 1.1e-31
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
Query: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA
Sbjct: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
Query: 61 GAAVALQIVSCTASGQRYYCLSR 84
GAAVALQIVSCTASGQRYYCLSR
Sbjct: 61 GAAVALQIVSCTASGQRYYCLSR 83
BLAST of MELO3C028997 vs. NCBI nr
Match:
XP_008447740.1 (PREDICTED: NEP1-interacting protein-like 2 isoform X2 [Cucumis melo])
HSP 1 Score: 147.1 bits (370), Expect = 1.1e-31
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
Query: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA
Sbjct: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
Query: 61 GAAVALQIVSCTASGQRYYCLSR 84
GAAVALQIVSCTASGQRYYCLSR
Sbjct: 61 GAAVALQIVSCTASGQRYYCLSR 83
BLAST of MELO3C028997 vs. NCBI nr
Match:
XP_011658973.2 (NEP1-interacting protein-like 1 [Cucumis sativus] >KGN44159.1 hypothetical protein Csa_016143 [Cucumis sativus])
HSP 1 Score: 109.4 bits (272), Expect = 2.5e-20
Identity = 67/83 (80.72%), Postives = 69/83 (83.13%), Query Frame = 0
Query: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
MLV+EFKEQLFF K LRFL EALK I AL LSLLALVGA VGTVIGAFKGHG IGAIA
Sbjct: 19 MLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASVGTVIGAFKGHGTGIGAIA 78
Query: 61 GAAVALQIVSCTASGQRYYCLSR 84
GAAVALQI S +ASG R YCLSR
Sbjct: 79 GAAVALQIFSSSASGHR-YCLSR 100
BLAST of MELO3C028997 vs. NCBI nr
Match:
XP_038897454.1 (NEP1-interacting protein-like 2 [Benincasa hispida])
HSP 1 Score: 103.2 bits (256), Expect = 1.8e-18
Identity = 58/78 (74.36%), Postives = 63/78 (80.77%), Query Frame = 0
Query: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
+LV+EFKEQ FDKA RF EA KT+ AL LSLLALVGA GTVIGAFKGHGAAIGAIA
Sbjct: 22 LLVIEFKEQQVFDKAFRFFVEASKTVGFALFLSLLALVGASAGTVIGAFKGHGAAIGAIA 81
Query: 61 GAAVALQIVSCTASGQRY 79
GAA LQI++CT SG RY
Sbjct: 82 GAATVLQILNCTESGHRY 99
BLAST of MELO3C028997 vs. ExPASy TrEMBL
Match:
A0A5D3DI33 (NEP1-interacting protein-like 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001100 PE=4 SV=1)
HSP 1 Score: 211.8 bits (538), Expect = 1.7e-51
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0
Query: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA
Sbjct: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
Query: 61 GAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDEL 114
GAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDEL
Sbjct: 61 GAAVALQIVSCTASGQRYYCLSRVGFSLYQRLHLIVAGSNNGEPDGWEGVDEL 113
BLAST of MELO3C028997 vs. ExPASy TrEMBL
Match:
A0A1S3BI36 (NEP1-interacting protein-like 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490143 PE=4 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 5.3e-32
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
Query: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA
Sbjct: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
Query: 61 GAAVALQIVSCTASGQRYYCLSR 84
GAAVALQIVSCTASGQRYYCLSR
Sbjct: 61 GAAVALQIVSCTASGQRYYCLSR 83
BLAST of MELO3C028997 vs. ExPASy TrEMBL
Match:
A0A1S3BIQ9 (NEP1-interacting protein-like 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490143 PE=4 SV=1)
HSP 1 Score: 147.1 bits (370), Expect = 5.3e-32
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0
Query: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA
Sbjct: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
Query: 61 GAAVALQIVSCTASGQRYYCLSR 84
GAAVALQIVSCTASGQRYYCLSR
Sbjct: 61 GAAVALQIVSCTASGQRYYCLSR 83
BLAST of MELO3C028997 vs. ExPASy TrEMBL
Match:
A0A0A0K5D1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209550 PE=4 SV=1)
HSP 1 Score: 109.4 bits (272), Expect = 1.2e-20
Identity = 67/83 (80.72%), Postives = 69/83 (83.13%), Query Frame = 0
Query: 1 MLVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIA 60
MLV+EFKEQLFF K LRFL EALK I AL LSLLALVGA VGTVIGAFKGHG IGAIA
Sbjct: 19 MLVLEFKEQLFFHKPLRFLTEALKMITFALFLSLLALVGASVGTVIGAFKGHGTGIGAIA 78
Query: 61 GAAVALQIVSCTASGQRYYCLSR 84
GAAVALQI S +ASG R YCLSR
Sbjct: 79 GAAVALQIFSSSASGHR-YCLSR 100
BLAST of MELO3C028997 vs. ExPASy TrEMBL
Match:
A0A6J1IML2 (NEP1-interacting protein-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111476931 PE=4 SV=1)
HSP 1 Score: 89.7 bits (221), Expect = 1.0e-14
Identity = 54/77 (70.13%), Postives = 57/77 (74.03%), Query Frame = 0
Query: 2 LVVEFKEQLFFDKALRFLAEALKTIALALLLSLLALVGACVGTVIGAFKGHGAAIGAIAG 61
LV+E K L FDKAL F EAL IA AL L LLALVGA VGTVIGAFKGHGAAIGAI G
Sbjct: 22 LVIELKHHLVFDKALWFFVEALNAIAFALFLCLLALVGASVGTVIGAFKGHGAAIGAIVG 81
Query: 62 AAVALQIVSCTASGQRY 79
AA ALQ++SC RY
Sbjct: 82 AAAALQLLSCPEPEYRY 98
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK23118.1 | 3.6e-51 | 100.00 | NEP1-interacting protein-like 2 isoform X2 [Cucumis melo var. makuwa] | [more] |
XP_008447739.1 | 1.1e-31 | 100.00 | PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Cucumis melo] | [more] |
XP_008447740.1 | 1.1e-31 | 100.00 | PREDICTED: NEP1-interacting protein-like 2 isoform X2 [Cucumis melo] | [more] |
XP_011658973.2 | 2.5e-20 | 80.72 | NEP1-interacting protein-like 1 [Cucumis sativus] >KGN44159.1 hypothetical prote... | [more] |
XP_038897454.1 | 1.8e-18 | 74.36 | NEP1-interacting protein-like 2 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3DI33 | 1.7e-51 | 100.00 | NEP1-interacting protein-like 2 isoform X2 OS=Cucumis melo var. makuwa OX=119469... | [more] |
A0A1S3BI36 | 5.3e-32 | 100.00 | NEP1-interacting protein-like 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034901... | [more] |
A0A1S3BIQ9 | 5.3e-32 | 100.00 | NEP1-interacting protein-like 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034901... | [more] |
A0A0A0K5D1 | 1.2e-20 | 80.72 | RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209550 P... | [more] |
A0A6J1IML2 | 1.0e-14 | 70.13 | NEP1-interacting protein-like 2 OS=Cucurbita maxima OX=3661 GN=LOC111476931 PE=4... | [more] |
Match Name | E-value | Identity | Description | |