Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCATCGTATCATTTGAAATTGAGGAGTTAAAAAAAAAGAGAGAAATATGGCTGAATTTCTTTGGACTTTTGCTGTTCAGGAAGTCCTAAAGAAGATCGTGAAATTTGGAGCACAGCAAATTGGGTTAGCATGGGGGTTGAAGAAGAAGAAGCTGTCCAATTTGAGACATTAACAGAAAGAAGTTACATATCGATTCTGGGAGGCTATGGGTGAAAGAACTTCAAGATATTGCCTACGAAGCTGATGATCTACTGAATGAGCTTGTTTATGAAGATCTTCGAAGAACTGCGGAACAAACTGAGGTACGTGATTTTATTTCCATCTCACCATCCAAAAATCCCTTTTTGTTTCGTTGCGAGAAGGCCAAGAAAATGAAGAACACTACTCAAACTTTATA
mRNA sequence
TTCATCGTATCATTTGAAATTGAGGAGTTAAAAAAAAAGAGAGAAATATGGCTGAATTTCTTTGGACTTTTGCTGTTCAGGAAGTCCTAAAGAAGATCGTGAAATTTGGAGCACAGCAAATTGGGTTAGCATGGGGGTTGAAGAAGAAGAAGCTGTCCAATTTGAGACATTAACAGAAAGAAGTTACATATCGATTCTGGGAGGCTATGGGTGAAAGAACTTCAAGATATTGCCTACGAAGCTGATGATCTACTGAATGAGCTTGTTTATGAAGATCTTCGAAGAACTGCGGAACAAACTGAGGTACGTGATTTTATTTCCATCTCACCATCCAAAAATCCCTTTTTGTTTCGTTGCGAGAAGGCCAAGAAAATGAAGAACACTACTCAAACTTTATA
Coding sequence (CDS)
ATGGCTGAATTTCTTTGGACTTTTGCTGTTCAGGAAGTCCTAAAGAAGATCGTGAAATTTGGAGCACAGCAAATTGGGTTAGCATGGGGGTTGAAGAAGAAGAAGCTGTCCAATTTGAGACATTAA
Protein sequence
MAEFLWTFAVQEVLKKIVKFGAQQIGLAWGLKKKKLSNLRH
Homology
BLAST of MELO3C028779 vs. NCBI nr
Match:
KAA0062827.1 (putative disease resistance protein RGA3 [Cucumis melo var. makuwa] >TYJ96722.1 putative disease resistance protein RGA3 [Cucumis melo var. makuwa])
HSP 1 Score: 79.3 bits (194), Expect = 8.3e-12
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0
Query: 1 MAEFLWTFAVQEVLKKIVKFGAQQIGLAWGLKKKKLSNLRH 42
M EFLWTFAVQEVLKKIVKFGAQQIGLAWGL+KKKLSNLR+
Sbjct: 1 MGEFLWTFAVQEVLKKIVKFGAQQIGLAWGLEKKKLSNLRN 41
BLAST of MELO3C028779 vs. NCBI nr
Match:
KAA0045131.1 (putative disease resistance protein RGA3 [Cucumis melo var. makuwa] >TYK23606.1 putative disease resistance protein RGA3 [Cucumis melo var. makuwa])
HSP 1 Score: 76.3 bits (186), Expect = 7.1e-11
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 0
Query: 1 MAEFLWTFAVQEVLKKIVKFGAQQIGLAWGLKKKKLSNLRH 42
MAEFLWTF VQEVLKKIVKFGAQQI LAWGL+KKKLSNLR+
Sbjct: 1 MAEFLWTFVVQEVLKKIVKFGAQQIRLAWGLEKKKLSNLRN 41
BLAST of MELO3C028779 vs. NCBI nr
Match:
XP_038877687.1 (putative disease resistance protein RGA1 [Benincasa hispida] >XP_038877688.1 putative disease resistance protein RGA1 [Benincasa hispida])
HSP 1 Score: 68.2 bits (165), Expect = 1.9e-08
Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 0
Query: 1 MAEFLWTFAVQEVLKKIVKFGAQQIGLAWGLKKKKLSNLRH 42
MAEFLWTFAVQEVLKKIVKFGA+QIGLAWGL +K++S LR+
Sbjct: 1 MAEFLWTFAVQEVLKKIVKFGAEQIGLAWGL-EKEVSQLRN 40
BLAST of MELO3C028779 vs. NCBI nr
Match:
XP_038877689.1 (putative disease resistance protein RGA3 [Benincasa hispida])
HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07
Identity = 29/35 (82.86%), Postives = 35/35 (100.00%), Query Frame = 0
Query: 1 MAEFLWTFAVQEVLKKIVKFGAQQIGLAWGLKKKK 36
MAEFLWTFAVQE+LKKIVKFGA+QIG+AWGL+K++
Sbjct: 1 MAEFLWTFAVQEILKKIVKFGAEQIGVAWGLEKEE 35
BLAST of MELO3C028779 vs. NCBI nr
Match:
XP_004140442.1 (disease resistance protein RGA2 [Cucumis sativus] >KGN50811.1 hypothetical protein Csa_018865 [Cucumis sativus])
HSP 1 Score: 63.9 bits (154), Expect = 3.6e-07
Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query: 1 MAEFLWTFAVQEVLKKIVKFGAQQIGLAWGLKKKKLSNLR 41
MAEFLWTFAVQEVLKKIV FGA+QI LAWGL +K+LS+L+
Sbjct: 1 MAEFLWTFAVQEVLKKIVNFGAEQISLAWGL-EKELSHLK 39
BLAST of MELO3C028779 vs. ExPASy TrEMBL
Match:
A0A5D3BA29 (Putative disease resistance protein RGA3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00100 PE=4 SV=1)
HSP 1 Score: 79.3 bits (194), Expect = 4.0e-12
Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 0
Query: 1 MAEFLWTFAVQEVLKKIVKFGAQQIGLAWGLKKKKLSNLRH 42
M EFLWTFAVQEVLKKIVKFGAQQIGLAWGL+KKKLSNLR+
Sbjct: 1 MGEFLWTFAVQEVLKKIVKFGAQQIGLAWGLEKKKLSNLRN 41
BLAST of MELO3C028779 vs. ExPASy TrEMBL
Match:
A0A5A7TUD7 (Putative disease resistance protein RGA3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001180 PE=4 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 3.4e-11
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 0
Query: 1 MAEFLWTFAVQEVLKKIVKFGAQQIGLAWGLKKKKLSNLRH 42
MAEFLWTF VQEVLKKIVKFGAQQI LAWGL+KKKLSNLR+
Sbjct: 1 MAEFLWTFVVQEVLKKIVKFGAQQIRLAWGLEKKKLSNLRN 41
BLAST of MELO3C028779 vs. ExPASy TrEMBL
Match:
A0A0A0KST5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G266890 PE=4 SV=1)
HSP 1 Score: 63.9 bits (154), Expect = 1.8e-07
Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 0
Query: 1 MAEFLWTFAVQEVLKKIVKFGAQQIGLAWGLKKKKLSNLR 41
MAEFLWTFAVQEVLKKIV FGA+QI LAWGL +K+LS+L+
Sbjct: 1 MAEFLWTFAVQEVLKKIVNFGAEQISLAWGL-EKELSHLK 39
BLAST of MELO3C028779 vs. ExPASy TrEMBL
Match:
A0A0A0KXG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016460 PE=4 SV=1)
HSP 1 Score: 61.6 bits (148), Expect = 8.7e-07
Identity = 31/39 (79.49%), Postives = 34/39 (87.18%), Query Frame = 0
Query: 1 MAEFLWTFAVQEVLKKIVKFGAQQIGLAWGLKKKKLSNL 40
MAEFLWTFAVQEVLKK++K A QIGLAWGL K+LSNL
Sbjct: 1 MAEFLWTFAVQEVLKKVLKLAADQIGLAWGL-DKELSNL 38
BLAST of MELO3C028779 vs. ExPASy TrEMBL
Match:
A0A6J1CVR6 (putative disease resistance protein RGA3 OS=Momordica charantia OX=3673 GN=LOC111014685 PE=4 SV=1)
HSP 1 Score: 61.6 bits (148), Expect = 8.7e-07
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0
Query: 1 MAEFLWTFAVQEVLKKIVKFGAQQIGLAWGLKKK 35
MAEFLWTFAVQEVL+KIVK AQQIGLAWGL+K+
Sbjct: 1 MAEFLWTFAVQEVLRKIVKVAAQQIGLAWGLEKE 34
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0062827.1 | 8.3e-12 | 92.68 | putative disease resistance protein RGA3 [Cucumis melo var. makuwa] >TYJ96722.1 ... | [more] |
| KAA0045131.1 | 7.1e-11 | 90.24 | putative disease resistance protein RGA3 [Cucumis melo var. makuwa] >TYK23606.1 ... | [more] |
| XP_038877687.1 | 1.9e-08 | 82.93 | putative disease resistance protein RGA1 [Benincasa hispida] >XP_038877688.1 put... | [more] |
| XP_038877689.1 | 1.2e-07 | 82.86 | putative disease resistance protein RGA3 [Benincasa hispida] | [more] |
| XP_004140442.1 | 3.6e-07 | 80.00 | disease resistance protein RGA2 [Cucumis sativus] >KGN50811.1 hypothetical prote... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BA29 | 4.0e-12 | 92.68 | Putative disease resistance protein RGA3 OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| A0A5A7TUD7 | 3.4e-11 | 90.24 | Putative disease resistance protein RGA3 OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
| A0A0A0KST5 | 1.8e-07 | 80.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G266890 PE=4 SV=1 | [more] |
| A0A0A0KXG9 | 8.7e-07 | 79.49 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G016460 PE=4 SV=1 | [more] |
| A0A6J1CVR6 | 8.7e-07 | 85.29 | putative disease resistance protein RGA3 OS=Momordica charantia OX=3673 GN=LOC11... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
